Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_E21
(609 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0319 + 22330477-22330504,22331817-22332198,22333015-22333192 257 6e-69
11_06_0317 + 22326599-22326695,22327058-22327439,22328334-22328511 257 6e-69
03_01_0382 + 2961665-2961672,2962504-2962557,2962935-2963004,296... 251 4e-67
03_03_0147 + 14838707-14838734,14839316-14839430,14839464-148396... 129 2e-30
07_03_1357 - 25982861-25983068,25983354-25983361 74 1e-13
07_03_1358 - 25984897-25984997,25985623-25985650 46 3e-05
04_04_1470 - 33818394-33818625,33819636-33819743,33819895-33820028 32 0.31
12_02_0441 + 19115990-19116478 31 0.71
01_07_0290 - 42542201-42542359,42542443-42542551,42542729-425435... 30 1.2
07_03_0366 + 17321948-17322331 29 2.2
02_05_1008 - 33461225-33462334 29 2.9
10_06_0085 + 10511258-10512327,10512978-10513058,10513318-105133... 29 3.8
10_02_0155 + 5937974-5939419,5939678-5939867,5940895-5941022 28 5.0
03_02_0167 - 6088818-6089870 28 5.0
01_06_0939 - 33188620-33189252,33189570-33189680,33190460-331906... 28 5.0
01_05_0369 - 21468204-21468595,21471417-21471606,21471680-214718... 28 6.7
01_01_0508 + 3710435-3710980,3711086-3711238,3711323-3711408,371... 28 6.7
08_02_0531 + 18256597-18256836,18257637-18257735,18258038-182581... 27 8.8
>11_06_0319 + 22330477-22330504,22331817-22332198,22333015-22333192
Length = 195
Score = 257 bits (629), Expect = 6e-69
Identities = 121/183 (66%), Positives = 146/183 (79%)
Frame = -2
Query: 608 KTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKR 429
KT+ PRRP+EK RLD ELK++GEYGLR KRE+WRV+Y L+RIR AR LLTL+EK+P+R
Sbjct: 12 KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARHLLTLDEKNPRR 71
Query: 428 LFEGNAXXXXXXXXXXLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILI 249
+FEG A L + Q KLDYVL L +E+FL RRLQT VFKAG+AKSIHHAR+LI
Sbjct: 72 IFEGEALLRRMNRYGLLADGQNKLDYVLALTVENFLARRLQTLVFKAGMAKSIHHARVLI 131
Query: 248 RQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQGGGATNDE 69
RQRHIRV +Q+VNIPSF+VR++S KHIDFSL SPFGGG PGRVKRKN +K GGG +E
Sbjct: 132 RQRHIRVGRQIVNIPSFMVRVESEKHIDFSLTSPFGGGPPGRVKRKNQKKASGGGGDGEE 191
Query: 68 EED 60
E++
Sbjct: 192 EDE 194
>11_06_0317 + 22326599-22326695,22327058-22327439,22328334-22328511
Length = 218
Score = 257 bits (629), Expect = 6e-69
Identities = 121/183 (66%), Positives = 146/183 (79%)
Frame = -2
Query: 608 KTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKR 429
KT+ PRRP+EK RLD ELK++GEYGLR KRE+WRV+Y L+RIR AR LLTL+EK+P+R
Sbjct: 35 KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARHLLTLDEKNPRR 94
Query: 428 LFEGNAXXXXXXXXXXLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILI 249
+FEG A L + Q KLDYVL L +E+FL RRLQT VFKAG+AKSIHHAR+LI
Sbjct: 95 IFEGEALLRRMNRYGLLADGQNKLDYVLALTVENFLARRLQTLVFKAGMAKSIHHARVLI 154
Query: 248 RQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQGGGATNDE 69
RQRHIRV +Q+VNIPSF+VR++S KHIDFSL SPFGGG PGRVKRKN +K GGG +E
Sbjct: 155 RQRHIRVGRQIVNIPSFMVRVESEKHIDFSLTSPFGGGPPGRVKRKNQKKASGGGGDGEE 214
Query: 68 EED 60
E++
Sbjct: 215 EDE 217
>03_01_0382 +
2961665-2961672,2962504-2962557,2962935-2963004,
2963141-2963386,2967246-2967491,2968837-2968888,
2969270-2969651,2970527-2970681,2971389-2971713,
2975803-2975871,2976189-2976346,2976444-2976551,
2976659-2977131
Length = 781
Score = 251 bits (614), Expect = 4e-67
Identities = 119/175 (68%), Positives = 141/175 (80%)
Frame = -2
Query: 608 KTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKR 429
KT+ PRRP+EK RLD ELK++GEYGLR KRE+WRV+Y L+RIR AR LLTL+EK+P+R
Sbjct: 228 KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARHLLTLDEKNPRR 287
Query: 428 LFEGNAXXXXXXXXXXLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILI 249
+FEG A L + Q KLDYVL L +E+FL RRLQT VFKAG+AKSIHHAR+LI
Sbjct: 288 IFEGEALLRRMNRYGLLADGQNKLDYVLALTVENFLARRLQTLVFKAGMAKSIHHARVLI 347
Query: 248 RQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQGGG 84
RQRHIRV +Q+VNIPSF+VR++S KHIDFSL SPFGGG PGRVKRKN +K GGG
Sbjct: 348 RQRHIRVGRQIVNIPSFMVRVESEKHIDFSLTSPFGGGPPGRVKRKNQKKASGGG 402
>03_03_0147 +
14838707-14838734,14839316-14839430,14839464-14839697,
14840571-14840667
Length = 157
Score = 129 bits (311), Expect = 2e-30
Identities = 69/125 (55%), Positives = 83/125 (66%)
Frame = -2
Query: 608 KTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKR 429
KT+ PRRP+EK R D ELK+ GEYGLR+K E+WRV+ ELLTL+EK+P+R
Sbjct: 12 KTFKKPRRPYEKERPDAELKLYGEYGLRSKCELWRVQ-----------ELLTLDEKNPRR 60
Query: 428 LFEGNAXXXXXXXXXXLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILI 249
+FEG A L E Q KLDYVL L +E+FL+ RLQT VFK G KSIHH +LI
Sbjct: 61 IFEGEALLRHMNRYGLLGEGQNKLDYVLALTVENFLQCRLQTIVFKNGTVKSIHHDHVLI 120
Query: 248 RQRHI 234
RQ HI
Sbjct: 121 RQHHI 125
>07_03_1357 - 25982861-25983068,25983354-25983361
Length = 71
Score = 73.7 bits (173), Expect = 1e-13
Identities = 37/58 (63%), Positives = 43/58 (74%)
Frame = -2
Query: 233 RVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQGGGATNDEEED 60
RV +Q+VNIPSFIVRL+S KHI FSL SP GG RVKRKN +K GGG +EEE+
Sbjct: 3 RVGRQLVNIPSFIVRLESEKHIAFSLTSPLGGSPAVRVKRKN-QKASGGGGDGEEEEE 59
>07_03_1358 - 25984897-25984997,25985623-25985650
Length = 42
Score = 45.6 bits (103), Expect = 3e-05
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = -2
Query: 608 KTYVTPRRPFEKARLDQELKIIGEYG 531
KT+ PRRP+EK RLD ELK++GEYG
Sbjct: 12 KTFKKPRRPYEKERLDAELKLVGEYG 37
>04_04_1470 - 33818394-33818625,33819636-33819743,33819895-33820028
Length = 157
Score = 32.3 bits (70), Expect = 0.31
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -2
Query: 317 RRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIV 192
RRL T + K A+ + A I+Q H+RV + V P+F+V
Sbjct: 82 RRLATVMVKLKFAEHLKEAVTYIQQGHVRVGPETVTDPAFLV 123
>12_02_0441 + 19115990-19116478
Length = 162
Score = 31.1 bits (67), Expect = 0.71
Identities = 20/50 (40%), Positives = 30/50 (60%)
Frame = -2
Query: 209 IPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQGGGATNDEEED 60
+ +F++RL K I K+ GGG GR K+ KG+GGG ++EEE+
Sbjct: 108 VKTFVIRLVE-KVIGLE-KNGRGGGGGGRKKK---GKGKGGGGEDEEEEE 152
>01_07_0290 - 42542201-42542359,42542443-42542551,42542729-42543516,
42543601-42543744,42543840-42544013,42544056-42544369,
42544467-42544636,42544916-42545043,42545125-42545185,
42545473-42545642,42545783-42547387,42547479-42547631,
42547747-42547905,42548066-42548236,42548357-42548404,
42548509-42548624,42548885-42549029,42549122-42549220
Length = 1570
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -2
Query: 143 GGGRPGRVKRKNLRKGQGGG 84
G RPG RKN +GQGGG
Sbjct: 1369 GSSRPGEWNRKNNNRGQGGG 1388
>07_03_0366 + 17321948-17322331
Length = 127
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -2
Query: 179 GKHIDFSLKSPFGGGRPGRVKRKNLRKGQGGGATNDE 69
G ++ +S GGG R +R+ R+G GGGA E
Sbjct: 32 GDTVEAERQSRHGGGGRRRRQRRGRRRGSGGGAMEAE 68
>02_05_1008 - 33461225-33462334
Length = 369
Score = 29.1 bits (62), Expect = 2.9
Identities = 24/81 (29%), Positives = 44/81 (54%)
Frame = -2
Query: 374 EKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFI 195
E Q+ L+Y+ G +E RR+ ++ F A +A+ + + +RHI V + + PS +
Sbjct: 163 ELQILLEYMDGGSLEG---RRIASEAFLADVARQVLSGIAYLHRRHI-VHRDIK--PSNL 216
Query: 194 VRLDSGKHIDFSLKSPFGGGR 132
+ +DSG+ + + FG GR
Sbjct: 217 L-IDSGRRVKI---ADFGVGR 233
>10_06_0085 +
10511258-10512327,10512978-10513058,10513318-10513396,
10514160-10514201
Length = 423
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -2
Query: 335 IEDFLERRLQTQVFKAGLAKSIHHAR 258
+ED+ E L T F A L KS+H AR
Sbjct: 110 VEDYFEGSLHTLDFLAALDKSLHRAR 135
>10_02_0155 + 5937974-5939419,5939678-5939867,5940895-5941022
Length = 587
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -1
Query: 303 SGVQGWSCEVNPSCPHLDQTEAY 235
+GV WS VNPS +L TEA+
Sbjct: 107 AGVSTWSLRVNPSSGNLHPTEAH 129
>03_02_0167 - 6088818-6089870
Length = 350
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -2
Query: 155 KSPFGGGRPGRVKRKNLRKGQGGGATNDEEED 60
K P GGG GR + G+ GG ++EEED
Sbjct: 103 KLPAGGGHRGR----QVLSGRSGGGVDEEEED 130
>01_06_0939 -
33188620-33189252,33189570-33189680,33190460-33190668,
33190781-33191078
Length = 416
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -2
Query: 560 QELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 438
Q L+ I G+ + +E++ + +L RIR R LT+E D
Sbjct: 212 QRLQTIHLLGIDDNQEIFTTQTSLTRIRAVPRYSLTIESLD 252
>01_05_0369 -
21468204-21468595,21471417-21471606,21471680-21471867,
21484028-21484580
Length = 440
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -2
Query: 140 GGRPGRVKRKNLRKGQGGGATNDEEE 63
GGRP + K + G+GG T DEEE
Sbjct: 169 GGRPAPEREKE-KAGRGGPLTGDEEE 193
>01_01_0508 +
3710435-3710980,3711086-3711238,3711323-3711408,
3711533-3711617,3711705-3711824,3711906-3711974,
3712088-3712217,3712336-3712406
Length = 419
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 326 SPQSSNRAHNPVSSVSHQALRPLP 397
SP SS+ + NP+S Q L+PLP
Sbjct: 124 SPSSSSPSLNPISHGESQVLQPLP 147
>08_02_0531 +
18256597-18256836,18257637-18257735,18258038-18258184,
18258295-18258427,18258521-18258585,18258792-18258962,
18259095-18259199,18259495-18259602,18259792-18260088,
18260191-18260256,18260477-18260679,18261178-18261232,
18261318-18261503,18261701-18261985
Length = 719
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Frame = -2
Query: 581 FEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAAR----ELLTLE 447
FE A+ ++ KII E R+ ++ +KY LA A ELL L+
Sbjct: 394 FEMAKQEESKKIISEEHQRSNEQITDLKYKLANCMNALESKNLELLNLQ 442
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,086,627
Number of Sequences: 37544
Number of extensions: 317755
Number of successful extensions: 1196
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1186
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1454766756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -