Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_E15
(641 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 428 e-122
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 416 e-118
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 293 9e-82
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 224 7e-61
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 125 4e-31
AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8 ... 25 0.62
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 24 1.4
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 22 4.4
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 5.8
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 5.8
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 22 5.8
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 21 7.7
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 21 7.7
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 21 7.7
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 21 7.7
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 428 bits (1055), Expect = e-122
Identities = 197/213 (92%), Positives = 204/213 (95%)
Frame = +2
Query: 2 AAVAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKCLIEALDAILPPARPTDKA 181
AAVAFVPISGWHGDNMLE S+KMPWFKGW VERKEGK EGKCLIEALDAILPP RPTDKA
Sbjct: 186 AAVAFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEALDAILPPTRPTDKA 245
Query: 182 LRLPLQDVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPG 361
LRLPLQDVYKIGGIGTVPVGRVETG+LKPG VV FAPA +TTEVKSVEMHHEALQEAVPG
Sbjct: 246 LRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPAGLTTEVKSVEMHHEALQEAVPG 305
Query: 362 DNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHT 541
DNVGFNVKNVSVKELRRGYVAGDSKNNPP+GAADFTAQVIVLNHPGQISNGYTPVLDCHT
Sbjct: 306 DNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHT 365
Query: 542 AHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGD 640
AHIACKFA+IKEK DRR GK+TE+NPKSIKSGD
Sbjct: 366 AHIACKFADIKEKCDRRNGKTTEENPKSIKSGD 398
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 416 bits (1024), Expect = e-118
Identities = 191/213 (89%), Positives = 202/213 (94%)
Frame = +2
Query: 2 AAVAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKCLIEALDAILPPARPTDKA 181
A+VAFVPISGWHGDNMLEPS K PW+KGW VERK+G A+GK LIEALDAILPP+RPTDKA
Sbjct: 186 ASVAFVPISGWHGDNMLEPSPKTPWYKGWKVERKDGNADGKTLIEALDAILPPSRPTDKA 245
Query: 182 LRLPLQDVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPG 361
LRLPLQDVYKIGGIGTVPVGRVETGILKPG +V FAPA +TTEVKSVEMHHEAL EA+PG
Sbjct: 246 LRLPLQDVYKIGGIGTVPVGRVETGILKPGMLVTFAPAALTTEVKSVEMHHEALTEALPG 305
Query: 362 DNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHT 541
DNVGFNVKN+SVKELRRGYVAGDSKN PPRGAADFTAQVIVLNHPGQISNGYTPVLDCHT
Sbjct: 306 DNVGFNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHT 365
Query: 542 AHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGD 640
AHIACKFAEIKEK DRRTGK+TE+NPKSIKSGD
Sbjct: 366 AHIACKFAEIKEKCDRRTGKTTEENPKSIKSGD 398
Score = 21.4 bits (43), Expect = 7.7
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -3
Query: 366 LSPGTASCRASWCISTDLTSVVMLAGAKTTTVPG 265
L PG A ++T++ SV M A T +PG
Sbjct: 272 LKPGMLVTFAPAALTTEVKSVEMHHEALTEALPG 305
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 293 bits (719), Expect = 9e-82
Identities = 136/146 (93%), Positives = 139/146 (95%)
Frame = +2
Query: 2 AAVAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKCLIEALDAILPPARPTDKA 181
AAVAFVPISGWHGDNMLE S+KMPWFKGW VERKEGK EGKCLIEALDAILPP RPTDKA
Sbjct: 129 AAVAFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEALDAILPPTRPTDKA 188
Query: 182 LRLPLQDVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPG 361
LRLPLQDVYKIGGIGTVPVGRVETG+LKPG VV FAPA +TTEVKSVEMHHEALQEAVPG
Sbjct: 189 LRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPAGLTTEVKSVEMHHEALQEAVPG 248
Query: 362 DNVGFNVKNVSVKELRRGYVAGDSKN 439
DNVGFNVKNVSVKELRRGYVAGDSKN
Sbjct: 249 DNVGFNVKNVSVKELRRGYVAGDSKN 274
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 224 bits (547), Expect = 7e-61
Identities = 102/109 (93%), Positives = 106/109 (97%)
Frame = +2
Query: 314 KSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNH 493
KSVEMHHEAL EA+PGDNVGFNVKN+SVKELRRGYVAGDSKN PPRGAADFTAQVIVLNH
Sbjct: 1 KSVEMHHEALTEALPGDNVGFNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIVLNH 60
Query: 494 PGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGD 640
PGQISNGYTPVLDCHTAHIACKFAEIKEK DRRTGK+TE+NPKSIKSGD
Sbjct: 61 PGQISNGYTPVLDCHTAHIACKFAEIKEKCDRRTGKTTEENPKSIKSGD 109
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 125 bits (301), Expect = 4e-31
Identities = 55/60 (91%), Positives = 56/60 (93%)
Frame = +2
Query: 2 AAVAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKCLIEALDAILPPARPTDKA 181
AAVAFVPISGWHGDNMLE S+KMPWFKGW VERKEGK EGKCLIEALDAILPP RPTDKA
Sbjct: 113 AAVAFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEALDAILPPTRPTDKA 172
>AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8
protein.
Length = 208
Score = 25.0 bits (52), Expect = 0.62
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +3
Query: 6 PSLSYPFLAGTEITC-WSRPPKCHGSRDGWLSVKKE 110
P+L F G + C SRP +C G DG++ KE
Sbjct: 160 PALEEQFATGRVLACISSRPGQC-GREDGYILEGKE 194
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.8 bits (49), Expect = 1.4
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +1
Query: 436 KQPTQGSCRLHSASHCAKSPRSNIKRIHTCIGLPHSP 546
K TQ S + + + P S +R HT G+P P
Sbjct: 1048 KTYTQYSVVVQAFNKVGSGPMSEERRQHTAEGVPEQP 1084
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 22.2 bits (45), Expect = 4.4
Identities = 8/39 (20%), Positives = 20/39 (51%)
Frame = -3
Query: 327 ISTDLTSVVMLAGAKTTTVPGFRIPVSTLPTGTVPIPPI 211
+ T++T+ + ++ G +P+++LP + I I
Sbjct: 831 VVTNVTTTINTPTTSVISMSGTTVPITSLPASSTSINSI 869
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.8 bits (44), Expect = 5.8
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +2
Query: 392 SVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPG 499
S ++LR ++A + + P+G Q++VLN G
Sbjct: 283 STRDLREIHLAYNGLRDLPKGIFTRLEQLLVLNLAG 318
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 5.8
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +3
Query: 579 KSTVVLVNQQRTTLNPLNLVM 641
KST V +R T+NP ++++
Sbjct: 142 KSTTTTVEVKRDTINPEDVIL 162
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 21.8 bits (44), Expect = 5.8
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +3
Query: 90 WLSVKKERLKVNALLRPSTPSFRLLAPLTRLSVF 191
W++ E+ K RP LL L RLS++
Sbjct: 3 WINRDGEKWKGKMSQRPLARMLALLVSLHRLSIY 36
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 21.4 bits (43), Expect = 7.7
Identities = 11/41 (26%), Positives = 18/41 (43%)
Frame = +3
Query: 363 TMLVSTSKTYLSRNCAVVTLQEIRKTTHPGELQTSQRKSLC 485
++ V TS + L + + + R HP EL+ S C
Sbjct: 402 SLFVETSASELVESSVLFPSLDSRDELHPRELEAVNLGSAC 442
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 21.4 bits (43), Expect = 7.7
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3
Query: 111 RLKVNALLRPSTPSFR 158
RL +N +LRP P F+
Sbjct: 274 RLLMNDILRPYVPEFK 289
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 21.4 bits (43), Expect = 7.7
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3
Query: 111 RLKVNALLRPSTPSFR 158
RL +N +LRP P F+
Sbjct: 189 RLLMNDILRPYVPEFK 204
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 21.4 bits (43), Expect = 7.7
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3
Query: 111 RLKVNALLRPSTPSFR 158
RL +N +LRP P F+
Sbjct: 508 RLLMNDILRPYVPEFK 523
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,872
Number of Sequences: 438
Number of extensions: 4438
Number of successful extensions: 20
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19315974
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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