Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_E10
(448 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139 prot... 23 1.5
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 22 3.5
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 22 3.5
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 22 3.5
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 22 3.5
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 22 3.5
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 22 3.5
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 22 3.5
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 22 3.5
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 21 4.6
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 21 4.6
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 21 6.1
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 21 6.1
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 21 8.1
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 21 8.1
>AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139
protein.
Length = 232
Score = 23.0 bits (47), Expect = 1.5
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +3
Query: 18 MKYLIFVWLFVFAEGG 65
+KYL+F++ FVFA G
Sbjct: 8 IKYLLFIFNFVFAVCG 23
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 3.5
Identities = 21/115 (18%), Positives = 53/115 (46%), Gaps = 10/115 (8%)
Frame = +2
Query: 113 KTSSQERRAQSLPISNRLPDQHNIFQFISRSER*NCSKIRLLQYKNK*IWRNRRNHKWHG 292
++ S++R + R HN + + ER +C + + + + +++N R ++ +G
Sbjct: 2 RSCSRDRNREYRKKDRRYEKLHNEKEKLLE-ERTSCKRYSRSREREQKLYKNEREYRKYG 60
Query: 293 *RCGQYRPQSLSRRQRW-------SLHVRLHYQE---SYKPRYHRL*HMANVFLP 427
+ R ++ + R++ SL +Y +YKP Y+ + ++ + +P
Sbjct: 61 -ETSKERSRNRTEREKSKEPKIISSLSNNYNYNNYNNNYKPLYYNINYIEQIPVP 114
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 3.5
Identities = 21/115 (18%), Positives = 53/115 (46%), Gaps = 10/115 (8%)
Frame = +2
Query: 113 KTSSQERRAQSLPISNRLPDQHNIFQFISRSER*NCSKIRLLQYKNK*IWRNRRNHKWHG 292
++ S++R + R HN + + ER +C + + + + +++N R ++ +G
Sbjct: 2 RSCSRDRNREYRKKDRRYEKLHNEKEKLLE-ERTSCKRYSRSREREQKLYKNEREYRKYG 60
Query: 293 *RCGQYRPQSLSRRQRW-------SLHVRLHYQE---SYKPRYHRL*HMANVFLP 427
+ R ++ + R++ SL +Y +YKP Y+ + ++ + +P
Sbjct: 61 -ETSKERSRNRTEREKSKEPKIISSLSNNYNYNNYNNNYKPLYYNINYIEQIPVP 114
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 3.5
Identities = 21/115 (18%), Positives = 53/115 (46%), Gaps = 10/115 (8%)
Frame = +2
Query: 113 KTSSQERRAQSLPISNRLPDQHNIFQFISRSER*NCSKIRLLQYKNK*IWRNRRNHKWHG 292
++ S++R + R HN + + ER +C + + + + +++N R ++ +G
Sbjct: 2 RSCSRDRNREYRKKDRRYEKLHNEKEKLLE-ERTSCKRYSRSREREQKLYKNEREYRKYG 60
Query: 293 *RCGQYRPQSLSRRQRW-------SLHVRLHYQE---SYKPRYHRL*HMANVFLP 427
+ R ++ + R++ SL +Y +YKP Y+ + ++ + +P
Sbjct: 61 -ETSKERSRNRTEREKSKEPKIISSLSNNYNYNNYNNNYKPLYYNINYIEQIPVP 114
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 3.5
Identities = 21/115 (18%), Positives = 53/115 (46%), Gaps = 10/115 (8%)
Frame = +2
Query: 113 KTSSQERRAQSLPISNRLPDQHNIFQFISRSER*NCSKIRLLQYKNK*IWRNRRNHKWHG 292
++ S++R + R HN + + ER +C + + + + +++N R ++ +G
Sbjct: 2 RSCSRDRNREYRKKDRRYEKLHNEKEKLLE-ERTSCKRYSRSREREQKLYKNEREYRKYG 60
Query: 293 *RCGQYRPQSLSRRQRW-------SLHVRLHYQE---SYKPRYHRL*HMANVFLP 427
+ R ++ + R++ SL +Y +YKP Y+ + ++ + +P
Sbjct: 61 -ETSKERSRNRTEREKSKEPKIISSLSNNYNYNNYNNNYKPLYYNINYIEQIPVP 114
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 3.5
Identities = 21/115 (18%), Positives = 53/115 (46%), Gaps = 10/115 (8%)
Frame = +2
Query: 113 KTSSQERRAQSLPISNRLPDQHNIFQFISRSER*NCSKIRLLQYKNK*IWRNRRNHKWHG 292
++ S++R + R HN + + ER +C + + + + +++N R ++ +G
Sbjct: 235 RSCSRDRNREYRKKDRRYEKLHNEKEKLLE-ERTSCKRYSRSREREQKLYKNEREYRKYG 293
Query: 293 *RCGQYRPQSLSRRQRW-------SLHVRLHYQE---SYKPRYHRL*HMANVFLP 427
+ R ++ + R++ SL +Y +YKP Y+ + ++ + +P
Sbjct: 294 -ETSKERSRNRTEREKSKEPKIISSLSNNYNYNNYNNNYKPLYYNINYIEQIPVP 347
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 3.5
Identities = 21/115 (18%), Positives = 53/115 (46%), Gaps = 10/115 (8%)
Frame = +2
Query: 113 KTSSQERRAQSLPISNRLPDQHNIFQFISRSER*NCSKIRLLQYKNK*IWRNRRNHKWHG 292
++ S++R + R HN + + ER +C + + + + +++N R ++ +G
Sbjct: 235 RSCSRDRNREYRKKDRRYEKLHNEKEKLLE-ERTSCKRYSRSREREQKLYKNEREYRKYG 293
Query: 293 *RCGQYRPQSLSRRQRW-------SLHVRLHYQE---SYKPRYHRL*HMANVFLP 427
+ R ++ + R++ SL +Y +YKP Y+ + ++ + +P
Sbjct: 294 -ETSKERSRNRTEREKSKEPKIISSLSNNYNYNNYNNNYKPLYYNINYIEQIPVP 347
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 3.5
Identities = 21/115 (18%), Positives = 53/115 (46%), Gaps = 10/115 (8%)
Frame = +2
Query: 113 KTSSQERRAQSLPISNRLPDQHNIFQFISRSER*NCSKIRLLQYKNK*IWRNRRNHKWHG 292
++ S++R + R HN + + ER +C + + + + +++N R ++ +G
Sbjct: 235 RSCSRDRNREYRKKDRRYEKLHNEKEKLLE-ERTSCKRYSRSREREQKLYKNEREYRKYG 293
Query: 293 *RCGQYRPQSLSRRQRW-------SLHVRLHYQE---SYKPRYHRL*HMANVFLP 427
+ R ++ + R++ SL +Y +YKP Y+ + ++ + +P
Sbjct: 294 -ETSKERSRNRTEREKSKEPKIISSLSNNYNYNNYNNNYKPLYYNINYIEQIPVP 347
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.8 bits (44), Expect = 3.5
Identities = 21/115 (18%), Positives = 53/115 (46%), Gaps = 10/115 (8%)
Frame = +2
Query: 113 KTSSQERRAQSLPISNRLPDQHNIFQFISRSER*NCSKIRLLQYKNK*IWRNRRNHKWHG 292
++ S++R + R HN + + ER +C + + + + +++N R ++ +G
Sbjct: 224 RSCSRDRNREYRKKDRRYEKLHNEKEKLLE-ERTSCKRYSRSREREQKLYKNEREYRKYG 282
Query: 293 *RCGQYRPQSLSRRQRW-------SLHVRLHYQE---SYKPRYHRL*HMANVFLP 427
+ R ++ + R++ SL +Y +YKP Y+ + ++ + +P
Sbjct: 283 -ETSKERSRNRTEREKSKEPKIISSLSNNYNYNNYNNNYKPLYYNINYIEQIPVP 336
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.4 bits (43), Expect = 4.6
Identities = 21/115 (18%), Positives = 53/115 (46%), Gaps = 10/115 (8%)
Frame = +2
Query: 113 KTSSQERRAQSLPISNRLPDQHNIFQFISRSER*NCSKIRLLQYKNK*IWRNRRNHKWHG 292
++ S++R + R HN + + ER +C + + + + +++N R ++ +G
Sbjct: 235 RSCSRDRNREYRKKDRRYEKLHNEKEKLLE-ERTSCKRYSRSREREQKLYKNEREYRKYG 293
Query: 293 *RCGQYRPQSLSRRQRW-------SLHVRLHYQE---SYKPRYHRL*HMANVFLP 427
+ R ++ + R++ SL +Y +YKP Y+ + ++ + +P
Sbjct: 294 -ETSKERSRNRTEREKSKEPKIISSLSNNYNYNNYNNNYKPLYYNIINIEQIPVP 347
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.4 bits (43), Expect = 4.6
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +2
Query: 98 EQQL*KTSSQERRAQSLPISNRLPDQHNIF 187
+QQ + Q+++ Q L N PD HN++
Sbjct: 1451 QQQQQQQQQQQQQQQQL---NHYPDLHNLY 1477
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 21.0 bits (42), Expect = 6.1
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +1
Query: 298 LWTVSTTKFISEAKMEFTRTITLPRKLQT 384
+W + T F+ A +EF T+ R+ +T
Sbjct: 296 IWFLGCTIFLFAAMVEFAFVNTIYRRKKT 324
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 21.0 bits (42), Expect = 6.1
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = +2
Query: 305 QYRPQSLSRRQRWSLHVRLHYQE 373
+Y +S S ++ S+H R+H +E
Sbjct: 123 EYCSKSFSVKENLSVHRRIHTKE 145
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 20.6 bits (41), Expect = 8.1
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = -3
Query: 365 SVIVRVNSIFASEINFVVDTVHSVSHAICDSGDFSI 258
S++ V ++ NFV D V + + + GD I
Sbjct: 449 SLVASVPFFANADSNFVSDVVTKLRYEVFQPGDIII 484
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 20.6 bits (41), Expect = 8.1
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = -3
Query: 365 SVIVRVNSIFASEINFVVDTVHSVSHAICDSGDFSI 258
S++ V ++ NFV D V + + + GD I
Sbjct: 417 SLVASVPFFANADSNFVSDVVTKLRYEVFQPGDIII 452
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,297
Number of Sequences: 438
Number of extensions: 2918
Number of successful extensions: 16
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11697255
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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