Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_E02
(613 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0512 + 29675835-29675901,29676681-29676813,29677020-296771... 34 0.10
05_01_0521 + 4500268-4500283,4500364-4500680,4500999-4501094,450... 33 0.24
06_01_0178 + 1386981-1387505 32 0.31
04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078 32 0.31
02_03_0273 + 17173983-17174339,17174423-17174575,17174638-171747... 32 0.41
06_02_0120 + 12055076-12055175,12055322-12055725 31 0.95
06_01_0145 + 1092764-1093351 31 0.95
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 31 0.95
10_08_0218 - 15967064-15967906 30 1.3
09_04_0156 - 15190502-15190903,15191149-15191154,15191512-15192351 30 1.3
04_01_0222 - 2805329-2805780,2805866-2806611,2806730-2806778,280... 29 2.2
03_05_1110 - 30466886-30467317,30467522-30467603,30467749-30467810 29 2.2
11_01_0687 - 5651002-5651453,5651535-5651951,5652621-5653338,565... 29 2.9
10_08_0095 + 14760292-14760624,14760689-14761000,14761768-147624... 29 2.9
03_05_0361 - 23448459-23448910,23448990-23449406,23449542-234497... 29 2.9
04_03_0331 + 14510848-14511124,14511139-14511528,14511708-145119... 29 3.8
04_01_0363 + 4754650-4755912 29 3.8
02_02_0731 + 13470863-13471111,13471122-13471598 29 3.8
01_06_0920 - 33009183-33009335,33009421-33009741,33010221-330103... 29 3.8
10_07_0161 - 13674631-13675433,13675793-13675862 28 5.1
02_01_0003 + 13079-13610,14005-14312,14364-14549,14620-14707,148... 28 5.1
06_02_0124 + 12116278-12116374,12116595-12116881 28 6.7
06_01_0973 + 7530436-7530510,7530566-7531297 28 6.7
05_03_0113 + 8526595-8527440,8527662-8528357 28 6.7
12_02_0127 + 13961726-13961947,13962050-13962121,13962288-139630... 27 8.9
10_05_0039 - 8461234-8461368,8461502-8461639,8461743-8461865 27 8.9
10_05_0037 + 8451675-8451797,8451901-8452038,8452163-8452297 27 8.9
08_02_1142 + 24657642-24657878 27 8.9
06_01_1174 - 10025086-10027217,10027271-10027333,10027704-10027866 27 8.9
>02_05_0512 +
29675835-29675901,29676681-29676813,29677020-29677164,
29677586-29678407
Length = 388
Score = 33.9 bits (74), Expect = 0.10
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 168 TRCSWNRWSSRVRWCPWCSRIEWC-PRNERRPRVPW 272
T C+ + W++ R PW S WC PR R PR PW
Sbjct: 144 TDCTSSWWNAD-RSPPWWSPSRWCCPRGSRIPRSPW 178
>05_01_0521 +
4500268-4500283,4500364-4500680,4500999-4501094,
4501219-4501296,4501333-4501557,4502842-4502910,
4502946-4503200
Length = 351
Score = 32.7 bits (71), Expect = 0.24
Identities = 25/67 (37%), Positives = 31/67 (46%)
Frame = +1
Query: 1 RGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVP 180
RG GG+G G G G RGF GR G +G G +G +G +G G RG
Sbjct: 7 RGFGRGGGGRGDGGGRGGGGGRGF-GRVGDSGGRGGRGGRGGRT-----PRGRGGGRGGG 60
Query: 181 GIDGLPG 201
G G+ G
Sbjct: 61 GRGGMKG 67
>06_01_0178 + 1386981-1387505
Length = 174
Score = 32.3 bits (70), Expect = 0.31
Identities = 24/63 (38%), Positives = 26/63 (41%)
Frame = +1
Query: 4 GLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPG 183
G G+PGG+G G G G G G G G G G G A G KG G G G
Sbjct: 13 GEPGQPGGRGRGGRGGRGGRGGASGGGG--GGGGGGGGGGGGGAGGKGGKGGAGGHGGAG 70
Query: 184 IDG 192
G
Sbjct: 71 GGG 73
Score = 30.7 bits (66), Expect = 0.95
Identities = 22/62 (35%), Positives = 25/62 (40%)
Frame = +1
Query: 7 LDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGI 186
+DG PG G G G G G G SG G G G G G+ G+ G G G
Sbjct: 11 VDGEPGQPGGRGRGGRGGRGGRGGASG-GGGGGGGGGGGGGGGGAGGKGGKGGAGGHGGA 69
Query: 187 DG 192
G
Sbjct: 70 GG 71
>04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078
Length = 1034
Score = 32.3 bits (70), Expect = 0.31
Identities = 26/62 (41%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = +1
Query: 13 GRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKG-EP-AAVVYGQKGEPGPRGVPGI 186
G GG G G G G G GR G G PG G +G EP YG G G RG G
Sbjct: 21 GGGGGDGRGGGYGGAGGGGVGGRGG-RGPPGGGGGRGYEPGGGRGYGGGGGGGGRGYGGG 79
Query: 187 DG 192
G
Sbjct: 80 GG 81
>02_03_0273 +
17173983-17174339,17174423-17174575,17174638-17174700,
17174943-17175026,17175120-17175242,17175466-17175519,
17175669-17175764,17176163-17176258,17177179-17177324,
17178503-17178632,17178697-17179272,17179364-17179462,
17179535-17179687,17179794-17180558,17181384-17181683
Length = 1064
Score = 31.9 bits (69), Expect = 0.41
Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +2
Query: 296 RVHKASKEYR-VNEEKSVLLEEMAHLAHQVHH 388
R+ + + YR +EK VLLEE+ HL +Q+H+
Sbjct: 731 RIQEELERYRNFKDEKEVLLEEIQHLKNQLHY 762
>06_02_0120 + 12055076-12055175,12055322-12055725
Length = 167
Score = 30.7 bits (66), Expect = 0.95
Identities = 23/63 (36%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
Frame = +1
Query: 16 RPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPA-AVVYGQKGEPGPRGVPGIDG 192
+P G G G G G PG G PGY G P YG G G G PG G
Sbjct: 67 QPRYGGGYGQPGYGGGYGQPGYGSGYG-PGYGGGGSGPGYGGGYGSPGYGGGYGSPGYGG 125
Query: 193 LPG 201
G
Sbjct: 126 GSG 128
>06_01_0145 + 1092764-1093351
Length = 195
Score = 30.7 bits (66), Expect = 0.95
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +1
Query: 4 GLDGRPGGQGAIGMSGEKGDRGFPGRSGLT-GEPGYKGDKG 123
G G+PGG+G G G G G GR G+ G G +G G
Sbjct: 22 GEPGQPGGRGRGGRGGRGGRGGAGGRLGVRHGRRGRRGGGG 62
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +1
Query: 94 GEPGYKGDKGEPAAVVYGQKGEPGPRGVPG 183
GEPG G+ G+P G +G G RG G
Sbjct: 16 GEPGQPGEPGQPGGRGRGGRGGRGGRGGAG 45
>01_01_0446 +
3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 30.7 bits (66), Expect = 0.95
Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = +1
Query: 13 GRPGGQGAIGMS--GEKGDRGFPGRSGLTGEPGYKGDKG 123
G PGGQG++ S G G R PG G P Y G G
Sbjct: 366 GAPGGQGSLPPSYDGGYGGRPMPGGGGPGAPPPYHGGGG 404
>10_08_0218 - 15967064-15967906
Length = 280
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/54 (35%), Positives = 22/54 (40%)
Frame = +1
Query: 13 GRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRG 174
G+ G G G + G +G G G G GY G YGQ G GP G
Sbjct: 139 GQAGSYGPGGAYAQGGGQGGGGGGGQNGGSGYGSGSG------YGQAGSYGPGG 186
Score = 27.5 bits (58), Expect = 8.9
Identities = 21/55 (38%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = +1
Query: 13 GRPGGQ-GAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRG 174
G+ GG G SG G +G G G G GY G YGQ G GP G
Sbjct: 59 GQAGGSSGGAYASGGGGGQG--GGGGQNGGSGYGSGSGSG----YGQAGGYGPHG 107
>09_04_0156 - 15190502-15190903,15191149-15191154,15191512-15192351
Length = 415
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/43 (37%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Frame = +1
Query: 4 GLDGRPGGQGAIGMSGEKGDRGFPGRS-GLTGEPGYKGDKGEP 129
G PGGQG G GE+GD G L GE +P
Sbjct: 195 GKGATPGGQGCTGQKGEEGDFAIDGHGRQLLGEMNVSKSTEQP 237
>04_01_0222 -
2805329-2805780,2805866-2806611,2806730-2806778,
2807031-2807748,2808513-2808824
Length = 758
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = +1
Query: 58 GDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDG 192
G +G G+ G G+PGY+G G+ YG G P P G G G
Sbjct: 290 GGKGAGGQGG--GQPGYEGGTGQQC---YG-VGAPPPTGQQGYGG 328
>03_05_1110 - 30466886-30467317,30467522-30467603,30467749-30467810
Length = 191
Score = 29.5 bits (63), Expect = 2.2
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +3
Query: 207 WCPWCSRIEWCPRNERR 257
WC WCS + W PR RR
Sbjct: 21 WCNWCSSVVW-PRQPRR 36
>11_01_0687 -
5651002-5651453,5651535-5651951,5652621-5653338,
5654106-5654417,5654482-5654814
Length = 743
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = +1
Query: 58 GDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDG 192
G +G G+ G G+PGY+G G+ YG G P P G G G
Sbjct: 401 GGKGAGGQGG--GQPGYEGGTGQQR---YG-VGAPPPTGQQGYGG 439
>10_08_0095 +
14760292-14760624,14760689-14761000,14761768-14762489,
14762905-14763187,14763419-14763650,14763736-14764187
Length = 777
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = +1
Query: 58 GDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDG 192
G +G G+ G G+PGY+G G+ YG G P P G G G
Sbjct: 401 GGKGAGGQGG--GQPGYEGGTGQQR---YG-VGAPPPTGQQGYGG 439
>03_05_0361 -
23448459-23448910,23448990-23449406,23449542-23449735,
23449854-23449902,23450155-23450539,23450578-23450874,
23451650-23451961
Length = 701
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = +1
Query: 58 GDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDG 192
G +G G+ G G+PGY+G G+ YG G P P G G G
Sbjct: 278 GGKGAGGQGG--GQPGYEGGTGQQR---YG-VGAPPPTGQQGYGG 316
>04_03_0331 +
14510848-14511124,14511139-14511528,14511708-14511997,
14512080-14512154,14512194-14512409,14512727-14512795,
14512941-14513891
Length = 755
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/54 (33%), Positives = 22/54 (40%)
Frame = +1
Query: 4 GLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPG 165
GL GRP QGA G +G R +G+ G P A +G G G
Sbjct: 152 GLRGRPSAQGASGSGPRRGGR--MSAAGVDGPHAIGAGFQAPMAPPFGGSGHGG 203
>04_01_0363 + 4754650-4755912
Length = 420
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 43 MSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPG 165
++ E+G R +PG +G+ G+ G G +GE + +K PG
Sbjct: 266 LNRERGGRTWPGEAGIAGQRGGSG-RGERGGI---RKSNPG 302
>02_02_0731 + 13470863-13471111,13471122-13471598
Length = 241
Score = 28.7 bits (61), Expect = 3.8
Identities = 21/60 (35%), Positives = 24/60 (40%)
Frame = +1
Query: 13 GRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDG 192
GR GG G G + R SG GY G GE A +G+ R V IDG
Sbjct: 12 GRWGGGGVAGATVMAVARRMARASGRNDGGGYAGRSGESKAARWGRMMMAVVRMVARIDG 71
>01_06_0920 -
33009183-33009335,33009421-33009741,33010221-33010343,
33010476-33010634,33010720-33011086,33011162-33011315,
33011782-33012874
Length = 789
Score = 28.7 bits (61), Expect = 3.8
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +3
Query: 141 LWSKRRTRTTRCSWNRW 191
LW +R+TRTT C++ W
Sbjct: 627 LWCRRQTRTTACAYIEW 643
>10_07_0161 - 13674631-13675433,13675793-13675862
Length = 290
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +1
Query: 22 GGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPA 132
GG G G G G RG G G G G G +G P+
Sbjct: 193 GGNGGGGSGGGGGARGSSGGGGGGGWAGGGGGQGNPS 229
>02_01_0003 +
13079-13610,14005-14312,14364-14549,14620-14707,
14807-14887,14980-15044,15357-15497,15578-15694,
15995-16237,16326-16383,18127-18224
Length = 638
Score = 28.3 bits (60), Expect = 5.1
Identities = 18/48 (37%), Positives = 19/48 (39%)
Frame = +1
Query: 40 GMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPG 183
G G GFPG G PG G P + G G P GVPG
Sbjct: 531 GFPGGMPGGGFPGGMPGGGFPGGMPGGGFPGGMPGGFPGGAMPGGVPG 578
>06_02_0124 + 12116278-12116374,12116595-12116881
Length = 127
Score = 27.9 bits (59), Expect = 6.7
Identities = 23/57 (40%), Positives = 23/57 (40%), Gaps = 3/57 (5%)
Frame = +1
Query: 13 GRPGGQG--AIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVY-GQKGEPGPRG 174
G GG G A G G G G PG G G PGY G Y G G PG G
Sbjct: 67 GYGGGYGRPAYG-GGYGGGYGHPGYGGGYGHPGYGDGYGGGYGSGYGGGYGHPGHGG 122
>06_01_0973 + 7530436-7530510,7530566-7531297
Length = 268
Score = 27.9 bits (59), Expect = 6.7
Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
Frame = +1
Query: 4 GLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEP---AAVVYGQKGEPG 165
G GR G G M G + RG R+ PG G +GE V++G G G
Sbjct: 134 GRGGRGGRGGGATMEGSRRGRGCSRRAPRCARPGGGGIRGEQDGLLEVIHGGGGGGG 190
>05_03_0113 + 8526595-8527440,8527662-8528357
Length = 513
Score = 27.9 bits (59), Expect = 6.7
Identities = 20/59 (33%), Positives = 26/59 (44%)
Frame = +1
Query: 16 RPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDG 192
RP G + G + G G PGRSG G + PA +GE G G+ G +G
Sbjct: 73 RPRGSRSFG-ARRGGFGGRPGRSGFGGGACFSQGGDGPAGTNRNNRGEVG--GLSGKEG 128
>12_02_0127 +
13961726-13961947,13962050-13962121,13962288-13963058,
13963401-13963573,13963973-13964083,13964114-13964460,
13964627-13964652
Length = 573
Score = 27.5 bits (58), Expect = 8.9
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = +3
Query: 162 RTTRCSWNRWSSRVRWCPWCSRIEWCP 242
+T R W +R RW P + WCP
Sbjct: 410 KTNRYFQLMWVTRKRWAPVYFKSNWCP 436
>10_05_0039 - 8461234-8461368,8461502-8461639,8461743-8461865
Length = 131
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +1
Query: 67 GFPGRSGL-TGEPGYKGDKGEPAAVVYGQKGEPG 165
GF +GL G Y +GEP AV+ G+KG G
Sbjct: 58 GFLAPTGLFLGPTKYMVIQGEPGAVIRGKKGSGG 91
>10_05_0037 + 8451675-8451797,8451901-8452038,8452163-8452297
Length = 131
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +1
Query: 67 GFPGRSGL-TGEPGYKGDKGEPAAVVYGQKGEPG 165
GF +GL G Y +GEP AV+ G+KG G
Sbjct: 58 GFLAPTGLFLGPTKYMVIQGEPGAVIRGKKGSGG 91
>08_02_1142 + 24657642-24657878
Length = 78
Score = 27.5 bits (58), Expect = 8.9
Identities = 22/61 (36%), Positives = 27/61 (44%)
Frame = +1
Query: 25 GQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLPGS 204
G G SG+ G RG GR+ G G +G AV + G G G +GL GS
Sbjct: 15 GAGVAAWSGDVGVRGLGGRARRCGAARCDGRRGLAVAVTAVRVGNRG-----GEEGL-GS 68
Query: 205 D 207
D
Sbjct: 69 D 69
>06_01_1174 - 10025086-10027217,10027271-10027333,10027704-10027866
Length = 785
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +1
Query: 73 PGRSGLTGEPGYKGDKGEPAAVVYGQKGEP-GPRGVPGIDG 192
P SGL G ++ KGE AA+V EP P G G
Sbjct: 301 PVNSGLGGAYYFRNSKGENAAIVKPNDEEPFAPNNPKGFTG 341
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.144 0.462
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,850,992
Number of Sequences: 37544
Number of extensions: 363069
Number of successful extensions: 1433
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1320
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1417
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1466594128
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)
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