Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_D22
         (434 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48783-6|CAA88700.1|  371|Caenorhabditis elegans Hypothetical pr...    26   3.1  
Z81049-4|CAJ76935.1|  496|Caenorhabditis elegans Hypothetical pr...    28   3.4  
Z81049-3|CAB02846.2|  631|Caenorhabditis elegans Hypothetical pr...    28   3.4  
Y14066-1|CAA74394.1|  497|Caenorhabditis elegans catalase 2 prot...    27   7.8  
U55384-1|AAC14537.1|  496|Caenorhabditis elegans cytosolic catal...    27   7.8  
AL034488-11|CAD31698.1|  512|Caenorhabditis elegans Hypothetical...    27   7.8  
AL034488-5|CAA22458.2|  497|Caenorhabditis elegans Hypothetical ...    27   7.8  

>Z48783-6|CAA88700.1|  371|Caenorhabditis elegans Hypothetical
           protein F33H1.5 protein.
          Length = 371

 Score = 25.8 bits (54), Expect(2) = 3.1
 Identities = 13/56 (23%), Positives = 30/56 (53%)
 Frame = -2

Query: 262 FNCHLLGHSEFI*AM*YIREIKITRIL*RNIKRNDLLFYMFWNVNIEILLFFYEQI 95
           F CH + HS++I  + +I   ++      + K+  ++  +F+ ++  I LF++  I
Sbjct: 115 FVCHAMAHSQWILLISFIYRYRVLVDGAPDTKKMIVIVSLFYAMSAVIFLFYFWDI 170



 Score = 20.6 bits (41), Expect(2) = 3.1
 Identities = 5/14 (35%), Positives = 7/14 (50%)
 Frame = -2

Query: 412 CEFCQVKNCMVCHC 371
           C++     C  CHC
Sbjct: 101 CKYVSSSLCFFCHC 114


>Z81049-4|CAJ76935.1|  496|Caenorhabditis elegans Hypothetical
           protein C48D1.1b protein.
          Length = 496

 Score = 27.9 bits (59), Expect = 3.4
 Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
 Frame = +1

Query: 13  LKLSPTRYCDVAFLDLAHDILKCLLKI-LFVHR--KITESQY*HSKTYKITNHSFLYSSI 183
           ++L   R+ D     L+ DIL+CLLK  L +     +TE++       ++ N ++ + S+
Sbjct: 114 MELPELRFMDCTRTSLSGDILECLLKTQLSIPNIISVTEAETSQYNDVRVLNTAYFHKSV 173

Query: 184 E 186
           +
Sbjct: 174 Q 174


>Z81049-3|CAB02846.2|  631|Caenorhabditis elegans Hypothetical
           protein C48D1.1a protein.
          Length = 631

 Score = 27.9 bits (59), Expect = 3.4
 Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
 Frame = +1

Query: 13  LKLSPTRYCDVAFLDLAHDILKCLLKI-LFVHR--KITESQY*HSKTYKITNHSFLYSSI 183
           ++L   R+ D     L+ DIL+CLLK  L +     +TE++       ++ N ++ + S+
Sbjct: 249 MELPELRFMDCTRTSLSGDILECLLKTQLSIPNIISVTEAETSQYNDVRVLNTAYFHKSV 308

Query: 184 E 186
           +
Sbjct: 309 Q 309


>Y14066-1|CAA74394.1|  497|Caenorhabditis elegans catalase 2
           protein.
          Length = 497

 Score = 26.6 bits (56), Expect = 7.8
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +1

Query: 355 SWHLVNNGTPYNFLLDRIH 411
           +W LV N TP  F+ D IH
Sbjct: 138 NWDLVGNNTPIFFIRDAIH 156


>U55384-1|AAC14537.1|  496|Caenorhabditis elegans cytosolic catalase
           protein.
          Length = 496

 Score = 26.6 bits (56), Expect = 7.8
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +1

Query: 355 SWHLVNNGTPYNFLLDRIH 411
           +W LV N TP  F+ D IH
Sbjct: 138 NWDLVGNNTPIFFIRDAIH 156


>AL034488-11|CAD31698.1|  512|Caenorhabditis elegans Hypothetical
           protein Y54G11A.13 protein.
          Length = 512

 Score = 26.6 bits (56), Expect = 7.8
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +1

Query: 355 SWHLVNNGTPYNFLLDRIH 411
           +W LV N TP  F+ D IH
Sbjct: 153 NWDLVGNNTPIFFIRDAIH 171


>AL034488-5|CAA22458.2|  497|Caenorhabditis elegans Hypothetical
           protein Y54G11A.6 protein.
          Length = 497

 Score = 26.6 bits (56), Expect = 7.8
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +1

Query: 355 SWHLVNNGTPYNFLLDRIH 411
           +W LV N TP  F+ D IH
Sbjct: 138 NWDLVGNNTPIFFIRDAIH 156


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,413,727
Number of Sequences: 27780
Number of extensions: 180683
Number of successful extensions: 439
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 439
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 735312162
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)