Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_D20
(570 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z30342-1|CAA82998.1| 356|Drosophila melanogaster torso like pro... 66 4e-11
X75614-1|CAA53285.1| 353|Drosophila melanogaster torso-like pro... 66 4e-11
AY071336-1|AAL48958.1| 353|Drosophila melanogaster RE37079p pro... 66 4e-11
AE014297-3041|AAN13883.1| 353|Drosophila melanogaster CG6705-PB... 66 4e-11
AE014297-3040|AAF55919.1| 353|Drosophila melanogaster CG6705-PA... 66 4e-11
Y14277-1|CAA74654.1| 1116|Drosophila melanogaster nuclear protei... 29 3.3
AY061410-1|AAL28958.1| 1127|Drosophila melanogaster LD34181p pro... 29 3.3
AE014134-1198|AAF52463.2| 1127|Drosophila melanogaster CG3423-PA... 29 3.3
AJ277789-1|CAB93525.1| 1738|Drosophila melanogaster mismatch dep... 28 7.7
AF132141-1|AAD33588.1| 1095|Drosophila melanogaster G/T mismatch... 28 7.7
AE014135-90|AAF59338.1| 1738|Drosophila melanogaster CG1981-PA p... 28 7.7
>Z30342-1|CAA82998.1| 356|Drosophila melanogaster torso like
protein.
Length = 356
Score = 65.7 bits (153), Expect = 4e-11
Identities = 28/50 (56%), Positives = 40/50 (80%), Gaps = 3/50 (6%)
Frame = +2
Query: 383 DSELGVGKAINIFMRYGYLSICMRVVPRNDT---EGWVFREPTVSVFRDV 523
+S+L +GKAINIF+RYGYL I MRV+P ND + WVF+EPT +++R++
Sbjct: 26 ESQLRIGKAINIFLRYGYLGISMRVIPLNDNSEPDRWVFKEPTKNIYRNL 75
>X75614-1|CAA53285.1| 353|Drosophila melanogaster torso-like
protein.
Length = 353
Score = 65.7 bits (153), Expect = 4e-11
Identities = 28/50 (56%), Positives = 40/50 (80%), Gaps = 3/50 (6%)
Frame = +2
Query: 383 DSELGVGKAINIFMRYGYLSICMRVVPRNDT---EGWVFREPTVSVFRDV 523
+S+L +GKAINIF+RYGYL I MRV+P ND + WVF+EPT +++R++
Sbjct: 23 ESQLRIGKAINIFLRYGYLGISMRVIPLNDNSEPDRWVFKEPTKNIYRNL 72
>AY071336-1|AAL48958.1| 353|Drosophila melanogaster RE37079p
protein.
Length = 353
Score = 65.7 bits (153), Expect = 4e-11
Identities = 28/50 (56%), Positives = 40/50 (80%), Gaps = 3/50 (6%)
Frame = +2
Query: 383 DSELGVGKAINIFMRYGYLSICMRVVPRNDT---EGWVFREPTVSVFRDV 523
+S+L +GKAINIF+RYGYL I MRV+P ND + WVF+EPT +++R++
Sbjct: 23 ESQLRIGKAINIFLRYGYLGISMRVIPLNDNSEPDRWVFKEPTKNIYRNL 72
>AE014297-3041|AAN13883.1| 353|Drosophila melanogaster CG6705-PB,
isoform B protein.
Length = 353
Score = 65.7 bits (153), Expect = 4e-11
Identities = 28/50 (56%), Positives = 40/50 (80%), Gaps = 3/50 (6%)
Frame = +2
Query: 383 DSELGVGKAINIFMRYGYLSICMRVVPRNDT---EGWVFREPTVSVFRDV 523
+S+L +GKAINIF+RYGYL I MRV+P ND + WVF+EPT +++R++
Sbjct: 23 ESQLRIGKAINIFLRYGYLGISMRVIPLNDNSEPDRWVFKEPTKNIYRNL 72
>AE014297-3040|AAF55919.1| 353|Drosophila melanogaster CG6705-PA,
isoform A protein.
Length = 353
Score = 65.7 bits (153), Expect = 4e-11
Identities = 28/50 (56%), Positives = 40/50 (80%), Gaps = 3/50 (6%)
Frame = +2
Query: 383 DSELGVGKAINIFMRYGYLSICMRVVPRNDT---EGWVFREPTVSVFRDV 523
+S+L +GKAINIF+RYGYL I MRV+P ND + WVF+EPT +++R++
Sbjct: 23 ESQLRIGKAINIFLRYGYLGISMRVIPLNDNSEPDRWVFKEPTKNIYRNL 72
>Y14277-1|CAA74654.1| 1116|Drosophila melanogaster nuclear protein
SA protein.
Length = 1116
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = -1
Query: 429 YLMKMLIALPTPSSESSVVAARHSATARSNTVGVRTITLKLLILHN 292
+LM +I+L T S+S V A RH+AT + + + + LL+ +N
Sbjct: 217 FLMDNVISLLTGLSDSQVRAFRHTATLAAMKLMTALVDVALLVSNN 262
>AY061410-1|AAL28958.1| 1127|Drosophila melanogaster LD34181p
protein.
Length = 1127
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = -1
Query: 429 YLMKMLIALPTPSSESSVVAARHSATARSNTVGVRTITLKLLILHN 292
+LM +I+L T S+S V A RH+AT + + + + LL+ +N
Sbjct: 228 FLMDNVISLLTGLSDSQVRAFRHTATLAAMKLMTALVDVALLVSNN 273
>AE014134-1198|AAF52463.2| 1127|Drosophila melanogaster CG3423-PA
protein.
Length = 1127
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = -1
Query: 429 YLMKMLIALPTPSSESSVVAARHSATARSNTVGVRTITLKLLILHN 292
+LM +I+L T S+S V A RH+AT + + + + LL+ +N
Sbjct: 228 FLMDNVISLLTGLSDSQVRAFRHTATLAAMKLMTALVDVALLVSNN 273
>AJ277789-1|CAB93525.1| 1738|Drosophila melanogaster mismatch depedent
uracil/thymineDNA glycosylase protein.
Length = 1738
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -3
Query: 322 HHTETPDPAQYPIKHQSSFQLA*TVIITSYGYNIDNSFTN 203
HH YPI +QS++ +I ++ G N++NS N
Sbjct: 1564 HHNSCDTNIDYPIHNQSAYHHTPHLIGSALGTNVNNSEPN 1603
>AF132141-1|AAD33588.1| 1095|Drosophila melanogaster G/T
mismatch-specific thymineDNA glycosylase protein.
Length = 1095
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -3
Query: 322 HHTETPDPAQYPIKHQSSFQLA*TVIITSYGYNIDNSFTN 203
HH YPI +QS++ +I ++ G N++NS N
Sbjct: 921 HHNSCDTNIDYPIHNQSAYHHTPHLIGSALGTNVNNSEPN 960
>AE014135-90|AAF59338.1| 1738|Drosophila melanogaster CG1981-PA
protein.
Length = 1738
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -3
Query: 322 HHTETPDPAQYPIKHQSSFQLA*TVIITSYGYNIDNSFTN 203
HH YPI +QS++ +I ++ G N++NS N
Sbjct: 1564 HHNSCDTNIDYPIHNQSAYHHTPHLIGSALGTNVNNSEPN 1603
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,874,338
Number of Sequences: 53049
Number of extensions: 572470
Number of successful extensions: 1294
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1249
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1289
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2234671092
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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