Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_D16
(279 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1445 + 26580293-26580610,26580814-26581314,26581411-265815... 27 2.1
06_03_1208 - 28422941-28423139,28423854-28424434,28424705-284250... 27 2.1
02_01_0623 - 4676847-4676879,4676953-4677115,4677467-4677620,467... 27 2.8
12_01_0161 - 1215892-1216026,1216393-1216462,1216623-1216786,121... 26 3.7
09_04_0435 - 17545879-17546605,17546721-17546782,17547123-175473... 26 3.7
12_01_0220 - 1657554-1657620,1657943-1658109,1658110-1658267,165... 25 6.5
11_04_0340 - 16536571-16536705,16536820-16536951,16537265-165381... 25 6.5
11_01_0218 - 1704459-1704629,1704895-1705119,1705120-1705277,170... 25 6.5
06_03_0291 + 19198302-19198333,19199218-19199734,19200171-192003... 25 6.5
01_06_1545 + 38144624-38145301 25 6.5
01_05_0111 - 18230195-18230239,18230541-18230615,18231379-182315... 25 6.5
12_01_1102 + 11622839-11623341,11623441-11623750 25 8.6
11_01_0069 - 557951-558412,558508-558684,559359-559523 25 8.6
08_02_0040 - 11526922-11527319,11528229-11528511 25 8.6
07_03_0419 - 17993478-17993777,17994045-17994195,17994799-179950... 25 8.6
05_03_0527 - 15025031-15025993 25 8.6
05_03_0524 + 14994170-14995132 25 8.6
02_03_0062 + 14586152-14586461,14586792-14587075,14587807-14588079 25 8.6
>07_03_1445 +
26580293-26580610,26580814-26581314,26581411-26581508,
26581900-26581978,26582065-26582325,26582409-26582576,
26582800-26583237
Length = 620
Score = 27.1 bits (57), Expect = 2.1
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +1
Query: 154 PDTSVDFNAGFKKFDTPFMKSSWEPNFGFSLS 249
PDT+ F AGF K T WE +GF +S
Sbjct: 414 PDTATIFGAGFGKGGTSL--PFWENVYGFDMS 443
>06_03_1208 -
28422941-28423139,28423854-28424434,28424705-28425078,
28425235-28425339,28425902-28425970,28426084-28426156,
28426395-28426478,28426616-28426648,28426731-28426790,
28427535-28427627,28427851-28427970,28428804-28428886,
28428887-28429007,28429114-28429164,28429245-28429333,
28429429-28429561,28430220-28430354,28430581-28430952,
28431679-28431796,28431883-28431998,28432131-28432442
Length = 1106
Score = 27.1 bits (57), Expect = 2.1
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 58 KDKIGASATAAHTDFINRNDYSLDGKLNLFKSPD 159
+D + + A T R D +DGKL++ +SPD
Sbjct: 224 EDFVDEAGNAYETACSERRDNDMDGKLHVAESPD 257
>02_01_0623 -
4676847-4676879,4676953-4677115,4677467-4677620,
4678413-4678554,4678641-4678706,4679389-4679922
Length = 363
Score = 26.6 bits (56), Expect = 2.8
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +1
Query: 166 VDFNAGFKKFDTPFMKSSW 222
VDF G+K D FM+S W
Sbjct: 143 VDFEDGYKTMDIKFMESVW 161
>12_01_0161 -
1215892-1216026,1216393-1216462,1216623-1216786,
1217856-1217896,1218044-1218136,1218226-1218313,
1218520-1218573,1218656-1218771,1218964-1219041,
1219171-1219321,1219399-1219509
Length = 366
Score = 26.2 bits (55), Expect = 3.7
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -2
Query: 251 LESENPKLGSQEDFMKGVSNFLKPALKSTEVSGL 150
L ++ P + EDF K VSNF + +ST +GL
Sbjct: 142 LANKKPLTCAYEDFEKLVSNFRRMRFESTVGAGL 175
>09_04_0435 -
17545879-17546605,17546721-17546782,17547123-17547335,
17547506-17547590,17547904-17548061,17548174-17548294,
17548765-17548927,17548973-17549097,17550800-17550888,
17550970-17551636,17552671-17552717,17553506-17553862
Length = 937
Score = 26.2 bits (55), Expect = 3.7
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -1
Query: 216 GLHEGCIELLEAGVEIDRGVRTLEE 142
G E C +L+ VEID + TLEE
Sbjct: 531 GSSEQCERILDLTVEIDGDINTLEE 555
>12_01_0220 - 1657554-1657620,1657943-1658109,1658110-1658267,
1658362-1658447,1658559-1658808,1659194-1660320,
1662207-1662351,1663555-1663696,1663775-1663828,
1663914-1663985,1664710-1664778,1664885-1664926,
1665024-1665092,1665257-1665394,1665518-1665628,
1665704-1665836,1666834-1666889,1667191-1667901
Length = 1198
Score = 25.4 bits (53), Expect = 6.5
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 29 LSVAE*TICSKIRLVHQRPPLTRTSSIVT 115
L +A + K RL+HQ LT SIVT
Sbjct: 1115 LHIAIVQVSCKFRLLHQNASLTAKESIVT 1143
>11_04_0340 -
16536571-16536705,16536820-16536951,16537265-16538106,
16538480-16538940,16539032-16540314,16540423-16541627,
16541857-16542157
Length = 1452
Score = 25.4 bits (53), Expect = 6.5
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = -1
Query: 180 GVEIDRGVRTLEEVQLSVQGVIVTIDEVRVSGGR*CTNL-IFEHIVYSATDSVE 22
GVE+ GV+ LE +V+ V+ T + R+ +L + ++Y A D ++
Sbjct: 34 GVELTEGVKKLEFEMRNVEMVLATAEGRRIDKKPLIQSLDVLRELLYDAEDVMD 87
>11_01_0218 -
1704459-1704629,1704895-1705119,1705120-1705277,
1705378-1705463,1705574-1705823,1706220-1707246
Length = 638
Score = 25.4 bits (53), Expect = 6.5
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 29 LSVAE*TICSKIRLVHQRPPLTRTSSIVT 115
L +A + K RL+HQ LT SIVT
Sbjct: 501 LHIAIVQVSCKFRLLHQNASLTAKESIVT 529
>06_03_0291 +
19198302-19198333,19199218-19199734,19200171-19200383,
19201067-19201111,19201671-19201945,19202041-19202152,
19202453-19202539,19202727-19202963,19204127-19204825
Length = 738
Score = 25.4 bits (53), Expect = 6.5
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 4/30 (13%)
Frame = +2
Query: 50 ICSKI-RLVHQRP---PLTRTSSIVTITPW 127
IC + RL+ RP +TR++ ++T TPW
Sbjct: 210 ICQYVPRLIRIRPLYLQITRSAGVITETPW 239
>01_06_1545 + 38144624-38145301
Length = 225
Score = 25.4 bits (53), Expect = 6.5
Identities = 11/42 (26%), Positives = 24/42 (57%)
Frame = +2
Query: 50 ICSKIRLVHQRPPLTRTSSIVTITPWTES*TSSRVLTPRSIS 175
ICS RL+H +P L T++ + +P++ + + +++S
Sbjct: 19 ICSTHRLLHPQPQLAATAASSSSSPFSSRSKIGKDIIDKTVS 60
>01_05_0111 -
18230195-18230239,18230541-18230615,18231379-18231566,
18232416-18232739,18232926-18233115
Length = 273
Score = 25.4 bits (53), Expect = 6.5
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 133 KLNLFKSPDTSVDFNAGFKKFDTPFMKSSWEPNF 234
K+ FK+ D + FN+ K F ++S WE F
Sbjct: 121 KIKKFKTGDKVLMFNSRVKLFGHGKLRSKWEGPF 154
>12_01_1102 + 11622839-11623341,11623441-11623750
Length = 270
Score = 25.0 bits (52), Expect = 8.6
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 133 KLNLFKSPDTSVDFNAGFKKFDTPFMKSSWEPNF 234
K+ FK D + FN+ K F ++S WE F
Sbjct: 221 KMKKFKPGDNVLMFNSRVKLFGHGKLRSKWEGPF 254
>11_01_0069 - 557951-558412,558508-558684,559359-559523
Length = 267
Score = 25.0 bits (52), Expect = 8.6
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -1
Query: 213 LHEGCIELLEAGVEIDRGVRTLEEVQLS 130
L C L AGVE +RTLE +LS
Sbjct: 185 LRRACEARLAAGVEAGNVLRTLEVAELS 212
>08_02_0040 - 11526922-11527319,11528229-11528511
Length = 226
Score = 25.0 bits (52), Expect = 8.6
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 133 KLNLFKSPDTSVDFNAGFKKFDTPFMKSSWEPNF 234
K+ FK D + FN+ K F ++S WE F
Sbjct: 44 KIKKFKPGDKVLMFNSRVKLFGHEKLRSKWEGPF 77
>07_03_0419 -
17993478-17993777,17994045-17994195,17994799-17995036,
17995133-17995343,17995440-17995618,17995735-17995833,
17996646-17997531
Length = 687
Score = 25.0 bits (52), Expect = 8.6
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = +1
Query: 55 FKDKIGASATAAHTDFINRNDYSLDGKLNLF---KSPDTSVDF 174
FK++I A HT+ +N + G+ NL P+ S+DF
Sbjct: 413 FKNEIQLIAKLQHTNLVNLRGCCIQGEENLLIYEYMPNKSLDF 455
>05_03_0527 - 15025031-15025993
Length = 320
Score = 25.0 bits (52), Expect = 8.6
Identities = 8/32 (25%), Positives = 19/32 (59%)
Frame = -1
Query: 261 LEIFRE*ESEVRFPGGLHEGCIELLEAGVEID 166
+++ R E++ R P +HE ++LL +++
Sbjct: 228 VQLIRGEETQTRIPAAMHEEILDLLRCFADVE 259
>05_03_0524 + 14994170-14995132
Length = 320
Score = 25.0 bits (52), Expect = 8.6
Identities = 8/32 (25%), Positives = 19/32 (59%)
Frame = -1
Query: 261 LEIFRE*ESEVRFPGGLHEGCIELLEAGVEID 166
+++ R E++ R P +HE ++LL +++
Sbjct: 228 VQLIRGEETQTRIPAAMHEEILDLLRCFADVE 259
>02_03_0062 + 14586152-14586461,14586792-14587075,14587807-14588079
Length = 288
Score = 25.0 bits (52), Expect = 8.6
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 133 KLNLFKSPDTSVDFNAGFKKFDTPFMKSSWEPNF 234
K+ FK D + FN+ K F ++S WE F
Sbjct: 143 KIKKFKPGDKVLMFNSRVKLFGHGKLRSKWEAPF 176
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,645,531
Number of Sequences: 37544
Number of extensions: 113052
Number of successful extensions: 318
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 313
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 318
length of database: 14,793,348
effective HSP length: 70
effective length of database: 12,165,268
effective search space used: 267635896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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