Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_D15
(387 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 33 0.016
SPAC3H1.12c |snt2||Lid2 complex subunit Snt2 |Schizosaccharomyce... 33 0.021
SPAC22E12.04 |ccs1|pccs, pccs|metallochaperone Ccs1 |Schizosacch... 31 0.048
SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2 |Schizo... 29 0.34
SPCC4G3.07c |phf1|swp1, saf50|PHD finger containing protein Phf1... 29 0.34
SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharo... 28 0.44
SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C |Schizosacchar... 28 0.59
SPAC2F7.07c |||histone deacetylase complex subunit Rco1 |Schizos... 27 1.4
SPBP23A10.04 |apc2||anaphase-promoting complex subunit Apc2 |Sch... 26 1.8
SPAC17G8.10c |dma1||mitotic spindle checkpoint protein Dma1|Schi... 26 1.8
SPBC21D10.09c |||ubiquitin-protein ligase E3 |Schizosaccharomyce... 26 2.4
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 25 3.1
SPBC26H8.13c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 25 3.1
SPAC4H3.12c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 4.1
SPBP35G2.10 |mit1||SHREC complex subunit Mit1|Schizosaccharomyce... 25 4.1
SPBC13G1.08c |ash2||Ash2-trithorax family protein|Schizosaccharo... 25 5.5
SPCC126.07c |||human CTD-binding SR-like protein rA9 homolog|Sch... 25 5.5
SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein lig... 24 9.6
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 33.1 bits (72), Expect = 0.016
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
Frame = +3
Query: 99 IMDCAHCNRTMKGCASI-KCSSCSSQYHLECV----SNEHLVTSANSWRCCRCEA 248
+ +C+ C T+ SI C +C +HL C+ N + ++WRC C++
Sbjct: 194 LYECSVCTDTINPSTSIWSCGTCYHVFHLSCIRKWCKNSIEQRNEDAWRCPYCQS 248
>SPAC3H1.12c |snt2||Lid2 complex subunit Snt2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1131
Score = 32.7 bits (71), Expect = 0.021
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 5/49 (10%)
Frame = +3
Query: 111 AHCNRTMKGCA---SIKCSSCSSQYHLECVSNEHLVTSAN--SWRCCRC 242
++C K CA S++C+ C YH++CV L + W C C
Sbjct: 260 SNCKVCKKWCAFDFSVQCADCKKYYHMDCVVPPLLKKPPHGFGWTCATC 308
>SPAC22E12.04 |ccs1|pccs, pccs|metallochaperone Ccs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 297
Score = 31.5 bits (68), Expect = 0.048
Identities = 17/48 (35%), Positives = 19/48 (39%), Gaps = 1/48 (2%)
Frame = +3
Query: 117 CNRTMKGCASIKCSSCSSQYHLECVSNEHL-VTSANSWRCCRCEAMKC 257
C++ K C S K SC SQ C S E S CC E C
Sbjct: 240 CSQEKKSCCSSKKPSCCSQEKKGCCSTEKTSCCSQEKKSCCTSEKPSC 287
Score = 24.2 bits (50), Expect = 7.2
Identities = 16/63 (25%), Positives = 22/63 (34%)
Frame = +3
Query: 87 KLVFIMDCAHCNRTMKGCASIKCSSCSSQYHLECVSNEHLVTSANSWRCCRCEAMKCSPI 266
+L + + + C S K S CS + C S + S CC E C
Sbjct: 215 ELKSVNEGSSCCSKKDSSPSEKPSCCSQEKKSCCSSKKPSCCSQEKKGCCSTEKTSCCSQ 274
Query: 267 ESK 275
E K
Sbjct: 275 EKK 277
Score = 23.8 bits (49), Expect = 9.6
Identities = 13/44 (29%), Positives = 16/44 (36%)
Frame = +3
Query: 138 CASIKCSSCSSQYHLECVSNEHLVTSANSWRCCRCEAMKCSPIE 269
C+ K S CSS+ C + S CC E C E
Sbjct: 240 CSQEKKSCCSSKKPSCCSQEKKGCCSTEKTSCCSQEKKSCCTSE 283
>SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1513
Score = 28.7 bits (61), Expect = 0.34
Identities = 10/46 (21%), Positives = 15/46 (32%)
Frame = +3
Query: 108 CAHCNRTMKGCASIKCSSCSSQYHLECVSNEHLVTSANSWRCCRCE 245
C +C + C C + YH C+ W C C+
Sbjct: 271 CEYCGLDKNPETILLCDGCEAAYHTSCLDPPLTSIPKEDWYCDACK 316
Score = 27.5 bits (58), Expect = 0.78
Identities = 10/33 (30%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +3
Query: 147 IKCSSCSSQYHLECVS-NEHLVTSANSWRCCRC 242
I C+ C ++H +CV N + S + + C C
Sbjct: 1368 IDCTICERRFHYDCVGLNNEIADSVSKFTCPIC 1400
>SPCC4G3.07c |phf1|swp1, saf50|PHD finger containing protein
Phf1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 461
Score = 28.7 bits (61), Expect = 0.34
Identities = 17/75 (22%), Positives = 33/75 (44%), Gaps = 7/75 (9%)
Frame = +3
Query: 69 LQEKKLKLVFIMDCAHCNRTMKGCAS--IKCSSCSSQYHLEC----VSNEHLVTSANSWR 230
L+ K K+ + C+ C R ++ + C C+S YH C + + + W
Sbjct: 180 LKRKSRKVDMVTLCSVCQRGHSPLSNRIVFCDGCNSPYHQLCHHPPIDDATVQDVDAEWF 239
Query: 231 CCRCEAMKC-SPIES 272
C +C+ + P+E+
Sbjct: 240 CMKCQYRRAKQPLET 254
>SPAC343.11c |msc1||multi-copy suppressor of Chk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1588
Score = 28.3 bits (60), Expect = 0.44
Identities = 14/49 (28%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Frame = +3
Query: 99 IMDCAHCNRTMKGCASIKCSSCSSQYHLECVSNEHL-VTSANSWRCCRC 242
I C C +G + + C C S YH CV + + W C C
Sbjct: 296 IPKCKLC--AQEGSSLVTCCICQSNYHYACVEAPFAPFSDIHYWTCNSC 342
Score = 27.9 bits (59), Expect = 0.59
Identities = 9/34 (26%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +3
Query: 144 SIKCSSCSSQYHLECVS-NEHLVTSANSWRCCRC 242
+++C +C +H ECV + +V++ +++ C C
Sbjct: 1469 TVQCHNCLEWFHYECVGLSSDIVSTLSNYACPDC 1502
Score = 23.8 bits (49), Expect = 9.6
Identities = 14/65 (21%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = +3
Query: 147 IKCSSCSSQYHLECVS-NEHLVTSANSWRCCRCEAMKCSPIESKVNPVVHV*PFVYEHSI 323
I+C C YH +C+ ++ + + + C C+ P S P++ + V +
Sbjct: 1185 IECELCHEWYHAKCMKMSKKKLRADEKFICPICDYRVEVPRHSHRPPLIELQKMVDDIPT 1244
Query: 324 VNFYP 338
+ F P
Sbjct: 1245 LPFQP 1249
>SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 988
Score = 27.9 bits (59), Expect = 0.59
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +3
Query: 99 IMDCAHCNRTMKGCASIKCSSCSSQYHLECVS 194
IM CA C ++C +CS H +CV+
Sbjct: 424 IMRCAVCAELFSYSPGLQCENCSFVCHKKCVT 455
>SPAC2F7.07c |||histone deacetylase complex subunit Rco1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 607
Score = 26.6 bits (56), Expect = 1.4
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +3
Query: 108 CAHCNRTMKGCASI-KCSSCSSQYHLECVSNEHLVTSANSWRCCRC 242
C C+++ SI C C+S +H +C+ N L T ++ R +C
Sbjct: 409 CFRCHKSALVSQSILACDYCNSYWHPDCL-NPPLATLPSNLRKWKC 453
Score = 23.8 bits (49), Expect = 9.6
Identities = 8/33 (24%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Frame = +3
Query: 153 CSSCSSQYHLECVSN--EHLVTSANSWRCCRCE 245
C +C + +H C+ E ++W C C+
Sbjct: 278 CETCPNSFHFTCIDPPIEEKNLPDDAWYCNECK 310
>SPBP23A10.04 |apc2||anaphase-promoting complex subunit Apc2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 681
Score = 26.2 bits (55), Expect = 1.8
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -2
Query: 329 VHNTMFVDKRLHMHNRVYFGLYWRALHG-FTPT 234
+ N+ F+D+ +HM N V GL+ L F PT
Sbjct: 438 IENSRFIDQSIHMENYVSKGLHVTILSRLFWPT 470
>SPAC17G8.10c |dma1||mitotic spindle checkpoint protein
Dma1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 267
Score = 26.2 bits (55), Expect = 1.8
Identities = 8/29 (27%), Positives = 15/29 (51%)
Frame = +3
Query: 105 DCAHCNRTMKGCASIKCSSCSSQYHLECV 191
+C C + C ++ + CS YH +C+
Sbjct: 191 ECCICLMPVLPCQALFVAPCSHSYHYKCI 219
>SPBC21D10.09c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1610
Score = 25.8 bits (54), Expect = 2.4
Identities = 13/53 (24%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = +3
Query: 99 IMDCAHCNRTM---KGCASIKCSSCSSQYHLECVSNEHLVTSANSWRCCRCEA 248
+ +CA C + + + +C +C ++H C+ S+NS RC C +
Sbjct: 1555 VEECAICYSVLSVERTLPNKRCGTCRHKFHASCLYK--WFKSSNSSRCPLCRS 1605
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 25.4 bits (53), Expect = 3.1
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 6 KTSKIISKTHIQSKKYSLFIYLQEKKLK 89
+TS+I +K H++S YSL L + LK
Sbjct: 530 ETSRIQAKNHLESYAYSLRNSLDDPNLK 557
>SPBC26H8.13c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 124
Score = 25.4 bits (53), Expect = 3.1
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 108 CAHCNRTMKGCASIKCSSCSSQ 173
CA C R C S CS CS Q
Sbjct: 84 CAICIRQCHKCESNVCSMCSKQ 105
>SPAC4H3.12c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 101
Score = 25.0 bits (52), Expect = 4.1
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +3
Query: 90 LVFIMDCAHCNRTMKGCASIKCSSCSSQYHLECVSNEHLVTSANSWRCC 236
+ ++ A CN ++ A KC Y L C+S L++SA+ CC
Sbjct: 42 IFYVYKIALCNEYIRFLA--KCFL----YILRCMSTVSLLSSAHKMNCC 84
>SPBP35G2.10 |mit1||SHREC complex subunit Mit1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1418
Score = 25.0 bits (52), Expect = 4.1
Identities = 10/38 (26%), Positives = 17/38 (44%), Gaps = 3/38 (7%)
Frame = +3
Query: 84 LKLVFIMDCAHCN---RTMKGCASIKCSSCSSQYHLEC 188
+K + + C C+ G + C CS+ YH +C
Sbjct: 207 IKFLHVCVCVKCHGREHRSSGKNFVYCDHCSNVYHYDC 244
>SPBC13G1.08c |ash2||Ash2-trithorax family
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 652
Score = 24.6 bits (51), Expect = 5.5
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +3
Query: 147 IKCSSCSSQYHLECVS 194
++CS C + +HL C+S
Sbjct: 56 LQCSVCLNMFHLSCLS 71
>SPCC126.07c |||human CTD-binding SR-like protein rA9
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 571
Score = 24.6 bits (51), Expect = 5.5
Identities = 8/29 (27%), Positives = 12/29 (41%)
Frame = +3
Query: 108 CAHCNRTMKGCASIKCSSCSSQYHLECVS 194
C C R+ + C C YH C++
Sbjct: 125 CVICGRSDHAEVLLLCDGCDDAYHTYCLN 153
>SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein ligase
E3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1647
Score = 23.8 bits (49), Expect = 9.6
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -3
Query: 172 CDEHELHFMDAHPFIVRLQCAQSIIKTNFNF 80
CDE E+ P + + C Q+++ T NF
Sbjct: 927 CDEREVLEFGNGPLVSLIFCLQNLLSTVENF 957
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,579,358
Number of Sequences: 5004
Number of extensions: 30823
Number of successful extensions: 96
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 95
length of database: 2,362,478
effective HSP length: 65
effective length of database: 2,037,218
effective search space used: 128344734
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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