Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_D14
(673 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 191 9e-50
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 191 9e-50
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 103 2e-23
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 29 0.61
SPAC1F7.12 |yak3|yakC, SPAC21E11.01|aldose reductase YakC|Schizo... 29 0.81
SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces pombe|c... 28 1.4
SPBC8D2.01 |gsk31||serine/threonine protein kinase Gsk31|Schizos... 27 1.9
SPBC36.07 |iki3||RNA polymerase II elongator subunit Iki3 |Schiz... 27 2.5
SPBP23A10.13 |orc4|orp4|origin recognition complex subunit Orc4|... 27 3.3
SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2 |Schizosacc... 26 4.3
SPBC119.08 |pmk1|spm1|MAP kinase Pmk1 |Schizosaccharomyces pombe... 26 5.7
SPAC1002.10c |sgt1||SGT1 family transcriptional regulator Sgt1|S... 26 5.7
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 25 9.9
SPBC646.04 |pla1||poly|Schizosaccharomyces pombe|chr 2|||Manual 25 9.9
SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomy... 25 9.9
SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase Cdc48|Schizosac... 25 9.9
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 191 bits (465), Expect = 9e-50
Identities = 87/131 (66%), Positives = 105/131 (80%)
Frame = +3
Query: 276 DLEEDHACIPIKKSDPVVSYRETVSEESDQMCLSKSPNKHNRLFMKAQPMPEGLPEDIDD 455
DL+EDHA IP+K S PVVSYRE+VSE S LSKSPNKHNR+FM A+PM E L I+
Sbjct: 544 DLQEDHAGIPLKISPPVVSYRESVSEPSSMTALSKSPNKHNRIFMTAEPMSEELSVAIET 603
Query: 456 GKVNPRDDFKTRARYLSDKYEYDLTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSV 635
G VNPRDDFK RAR ++D++ +D+T+ARKIWCFGP+ TG N++VD +K V YLNEIKDSV
Sbjct: 604 GHVNPRDDFKVRARIMADEFGWDVTDARKIWCFGPDTTGANVVVDQTKAVAYLNEIKDSV 663
Query: 636 VAGFQWAAKEG 668
VA F WA+KEG
Sbjct: 664 VAAFAWASKEG 674
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 191 bits (465), Expect = 9e-50
Identities = 87/131 (66%), Positives = 105/131 (80%)
Frame = +3
Query: 276 DLEEDHACIPIKKSDPVVSYRETVSEESDQMCLSKSPNKHNRLFMKAQPMPEGLPEDIDD 455
DL+EDHA IP+K S PVVSYRE+VSE S LSKSPNKHNR+FM A+PM E L I+
Sbjct: 544 DLQEDHAGIPLKISPPVVSYRESVSEPSSMTALSKSPNKHNRIFMTAEPMSEELSVAIET 603
Query: 456 GKVNPRDDFKTRARYLSDKYEYDLTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSV 635
G VNPRDDFK RAR ++D++ +D+T+ARKIWCFGP+ TG N++VD +K V YLNEIKDSV
Sbjct: 604 GHVNPRDDFKVRARIMADEFGWDVTDARKIWCFGPDTTGANVVVDQTKAVAYLNEIKDSV 663
Query: 636 VAGFQWAAKEG 668
VA F WA+KEG
Sbjct: 664 VAAFAWASKEG 674
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 103 bits (247), Expect = 2e-23
Identities = 51/135 (37%), Positives = 75/135 (55%), Gaps = 4/135 (2%)
Frame = +3
Query: 276 DLEEDHACIPIKKSDPVVSYRETVSEESDQMCLSKSPNKHNRLFMKAQPMPEGLPEDIDD 455
DL ++ I I+ SDPV + ET + S C S +PNK NR+ M +P+ +G+ DI++
Sbjct: 656 DLRTLYSEIEIRVSDPVARFCETAVDTSSIKCFSDTPNKKNRITMVVEPLEKGISNDIEN 715
Query: 456 GKVNPRDDFKTRARYLSDKYEYDLTEARKIWCFGPEGTGPNILVDCSKGV----QYLNEI 623
GKVN K + + Y++DL +R IW FGP+ G NIL D + LN +
Sbjct: 716 GKVNINWPQKRISEFFQKNYDWDLLASRSIWAFGPDDRGTNILRDDTLSTDVDKNVLNSV 775
Query: 624 KDSVVAGFQWAAKEG 668
K+ + GFQW +EG
Sbjct: 776 KEYIKQGFQWGTREG 790
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 29.1 bits (62), Expect = 0.61
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 276 DLEEDHACIPIKKSDPVVSYRETVSEESDQMCLSK 380
DL E A I I+ S P+V YRET D + +K
Sbjct: 619 DLRERFAKIEIQASQPLVPYRETTIATPDLLAKNK 653
Score = 27.5 bits (58), Expect = 1.9
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Frame = +3
Query: 372 LSKSPNKHNRLFMKAQPMPEGLPEDIDDGKVNPRDDFKTRARYLSDKYEYDLTEARK--- 542
+S + +K NR + ++ + + + E + K F R L ++ DL E +
Sbjct: 696 VSSNFSKKNRNVVVSESLTKSMEEVLTPEK------FYERLSKLLEEENSDLGELKNHLD 749
Query: 543 -IWCFGPEGTGPNILVDCSK 599
I FGP+ GPNIL D +K
Sbjct: 750 SIIAFGPKRVGPNILFDKTK 769
>SPAC1F7.12 |yak3|yakC, SPAC21E11.01|aldose reductase
YakC|Schizosaccharomyces pombe|chr 1|||Manual
Length = 340
Score = 28.7 bits (61), Expect = 0.81
Identities = 13/51 (25%), Positives = 24/51 (47%)
Frame = +3
Query: 279 LEEDHACIPIKKSDPVVSYRETVSEESDQMCLSKSPNKHNRLFMKAQPMPE 431
LEE+ + +K SD V + ++ + P +++FM PMP+
Sbjct: 290 LEENFGALKVKLSDATVKEIREACDNAEVIGARYPPGAGSKIFMDTPPMPK 340
>SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 871
Score = 27.9 bits (59), Expect = 1.4
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 13/74 (17%)
Frame = +3
Query: 255 VPNSARGDLEEDHACIP----------IKKSDPVVSYRETVS---EESDQMCLSKSPNKH 395
+PNS D E H P +KK + V R + E + ++KS KH
Sbjct: 191 LPNSVLNDEETLHELFPNASEFTCVRDLKKLEKKVKKRSDLGNKYESTLNSLINKSVKKH 250
Query: 396 NRLFMKAQPMPEGL 437
N+L K +P+P L
Sbjct: 251 NKLVKKHKPLPSTL 264
>SPBC8D2.01 |gsk31||serine/threonine protein kinase
Gsk31|Schizosaccharomyces pombe|chr 2|||Manual
Length = 381
Score = 27.5 bits (58), Expect = 1.9
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3
Query: 665 FLGGPLEPGDDRVLDLVQVLHTL 597
F+G PL PGD V LV+++ L
Sbjct: 220 FIGRPLFPGDSSVEQLVEIIRVL 242
>SPBC36.07 |iki3||RNA polymerase II elongator subunit Iki3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1253
Score = 27.1 bits (57), Expect = 2.5
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 435 LPEDIDDGKVNPRDDFKTRARYLSDKYEYDLTEARK 542
LPE ID+GK++ DD KT + D + K
Sbjct: 194 LPEKIDEGKLSDVDDGKTYICWRGDSQYVSINRLEK 229
>SPBP23A10.13 |orc4|orp4|origin recognition complex subunit
Orc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 972
Score = 26.6 bits (56), Expect = 3.3
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = +3
Query: 525 LTEARKIWCFGPEGTGPNILVD--CSKGVQYLNE 620
L E + GP G+G ++LVD S+ Q +NE
Sbjct: 572 LGEGNSVIIVGPRGSGKSVLVDDILSRAAQEINE 605
>SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 830
Score = 26.2 bits (55), Expect = 4.3
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 336 RETVSEESDQMCLSKSPNKHNRLFMKAQP 422
R T EE + L+KSP+ HNR+ P
Sbjct: 466 RLTDDEEREIRALAKSPDIHNRIIASMAP 494
>SPBC119.08 |pmk1|spm1|MAP kinase Pmk1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 422
Score = 25.8 bits (54), Expect = 5.7
Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = -3
Query: 662 LGG-PLEPGDDRVLDLVQVLHTLRAVDEDVRSGALGAEAPDLTR 534
LGG PL G D V L +LH L DE+ S + A + R
Sbjct: 223 LGGTPLFKGKDFVHQLNLILHQLGTPDEETLSHISSSRAQEYVR 266
>SPAC1002.10c |sgt1||SGT1 family transcriptional regulator
Sgt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 590
Score = 25.8 bits (54), Expect = 5.7
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -1
Query: 373 KHIWSDSSLTVSRYDTTGSDFLIGM 299
+HIW + L + R + G D ++G+
Sbjct: 57 EHIWQNEELNLQRVEYQGKDCILGI 81
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 25.0 bits (52), Expect = 9.9
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +3
Query: 222 NSQKKKKKTRLVPNSARGDLEEDHACIPIKKSDPVVSYR 338
+ +KKKKK + NSA ++++ + +D ++YR
Sbjct: 183 SKRKKKKKKKSKANSASLNVDDQRDFEQVYSTDVAITYR 221
>SPBC646.04 |pla1||poly|Schizosaccharomyces pombe|chr 2|||Manual
Length = 566
Score = 25.0 bits (52), Expect = 9.9
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -1
Query: 439 GRPSGMGWAFMKRRLCLL 386
G P G+ WA M R+C L
Sbjct: 228 GFPGGVAWAMMVARICQL 245
>SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 603
Score = 25.0 bits (52), Expect = 9.9
Identities = 15/65 (23%), Positives = 28/65 (43%)
Frame = +3
Query: 255 VPNSARGDLEEDHACIPIKKSDPVVSYRETVSEESDQMCLSKSPNKHNRLFMKAQPMPEG 434
+P+++ + DH+ P+ V Y +EE+ + SPN F P G
Sbjct: 391 LPSASPPTMFRDHSFAPLVSPSIVSPYGVLENEETGECAFLFSPNASQPHFQPRAP-TFG 449
Query: 435 LPEDI 449
+P ++
Sbjct: 450 IPRNV 454
>SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase
Cdc48|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 25.0 bits (52), Expect = 9.9
Identities = 11/46 (23%), Positives = 22/46 (47%)
Frame = +3
Query: 447 IDDGKVNPRDDFKTRARYLSDKYEYDLTEARKIWCFGPEGTGPNIL 584
+++ K R+ + Y + +T ++ + FGP GTG +L
Sbjct: 502 LEEVKRELRETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLL 547
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,524,231
Number of Sequences: 5004
Number of extensions: 53486
Number of successful extensions: 180
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 179
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 307866294
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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