Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_D14
         (673 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    28   0.093
X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    23   3.5  
EF013227-1|ABK54581.1|  119|Apis mellifera elongation factor 1-a...    23   3.5  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    22   6.1  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    22   6.1  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    21   8.1  

>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 27.9 bits (59), Expect = 0.093
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +3

Query: 555 GPEGTGPNILVDCSKGVQYLNEIKDSVVA 641
           GP   GP+ ++D + GV Y  +I  + +A
Sbjct: 294 GPNSQGPSSVIDTNTGVDYFTQINRNGIA 322


>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 147 HTPQMFCYNCKLKCKFIE 200
           +TP + C+   + CKF E
Sbjct: 357 YTPVLDCHTAHIACKFAE 374


>EF013227-1|ABK54581.1|  119|Apis mellifera elongation factor
           1-alpha protein.
          Length = 119

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 147 HTPQMFCYNCKLKCKFIE 200
           +TP + C+   + CKF E
Sbjct: 68  YTPVLDCHTAHIACKFAE 85


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 417 QPMPEGLPEDIDDGKVNPR 473
           +P+PE L ED+   +V PR
Sbjct: 20  KPLPENLKEDLIVYQVYPR 38


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 417 QPMPEGLPEDIDDGKVNPR 473
           +P+PE L ED+   +V PR
Sbjct: 20  KPLPENLKEDLIVYQVYPR 38


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +3

Query: 147 HTPQMFCYNCKLKCKFIE 200
           +TP + C+   + CKF +
Sbjct: 357 YTPVLDCHTAHIACKFAD 374


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,608
Number of Sequences: 438
Number of extensions: 3167
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20343105
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)