Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_D12
(680 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces pombe... 28 1.4
SPAC4D7.01c |sec71|sec7a, SPAP8A3.15c|Sec7 domain|Schizosaccharo... 28 1.4
SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||M... 27 2.5
SPAC4C5.04 |rad31|uba4|SUMO E1-like activator enzyme Rad31|Schiz... 27 2.5
SPAC6G9.15c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 3.3
SPBC32F12.10 |||phosphoglucomutase |Schizosaccharomyces pombe|ch... 27 3.3
SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pomb... 26 4.4
SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase Hrp1|Schizosac... 25 7.7
SPBC83.11 |||triose phosphate transporter|Schizosaccharomyces po... 25 7.7
SPCC1672.11c |||P-type ATPase |Schizosaccharomyces pombe|chr 3||... 25 7.7
SPAC1420.01c ||SPAC56E4.08c|DUF1752 family protein|Schizosacchar... 25 7.7
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 25 7.7
SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr 1|||... 25 7.7
>SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 871
Score = 27.9 bits (59), Expect = 1.4
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +1
Query: 130 KAEPLRTVKVSILQDDKEKANIKPNFSIQVKFTTDNKAS 246
KA+ LRT S+L DD+ +AN+ + ++ NK S
Sbjct: 829 KAKELRTRPPSLLIDDENEANLTSSIGLKKNAKQKNKKS 867
>SPAC4D7.01c |sec71|sec7a, SPAP8A3.15c|Sec7
domain|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1811
Score = 27.9 bits (59), Expect = 1.4
Identities = 21/62 (33%), Positives = 32/62 (51%)
Frame = +1
Query: 118 EDPKKAEPLRTVKVSILQDDKEKANIKPNFSIQVKFTTDNKASKSPVKHGIVDSKKHLIT 297
+DP + E L+ K LQ+ +K N KP I++ ++ ASK+P D K LI+
Sbjct: 688 DDPSQFENLKHRKKQ-LQEAIQKFNYKPKEGIKILLSSHFIASKTP-----TDIAKFLIS 741
Query: 298 NE 303
E
Sbjct: 742 TE 743
>SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1052
Score = 27.1 bits (57), Expect = 2.5
Identities = 22/96 (22%), Positives = 40/96 (41%)
Frame = +1
Query: 52 PTNTHSKIMNVTKSQKEYDPSKEDPKKAEPLRTVKVSILQDDKEKANIKPNFSIQVKFTT 231
P N +S NV +++K+Y PS++D K V + Q I+ +I V+
Sbjct: 738 PINENS---NVEEAEKDYQPSEKDDKSLIGGILSTVEMTQSTDVNDEIENTLTIPVEVEH 794
Query: 232 DNKASKSPVKHGIVDSKKHLITNEQDNNNKTEEKML 339
+ K ++ D K + +N N E ++
Sbjct: 795 SDNIDKGSEEN---DLGKEAVDEANNNQNDVLESVV 827
>SPAC4C5.04 |rad31|uba4|SUMO E1-like activator enzyme
Rad31|Schizosaccharomyces pombe|chr 1|||Manual
Length = 307
Score = 27.1 bits (57), Expect = 2.5
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Frame = -1
Query: 242 ALLSVVNFT*IEKLGFIFAFSLSS---CKILTLTVLSGSAFLGSSFEGSY--SFCDLV 84
+L+S ++ I K + A L C+I LT + ++F +S G Y +FCDL+
Sbjct: 108 SLISEIDEGKISKFSMVIATQLDYEEFCRINELTRICNASFYATSCFGLYGFAFCDLI 165
>SPAC6G9.15c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 498
Score = 26.6 bits (56), Expect = 3.3
Identities = 21/83 (25%), Positives = 36/83 (43%)
Frame = +1
Query: 73 IMNVTKSQKEYDPSKEDPKKAEPLRTVKVSILQDDKEKANIKPNFSIQVKFTTDNKASKS 252
IM VTKS K KKA ++ + + E +N+ S+ T+ N K+
Sbjct: 156 IMGVTKSSKNLVEDAHKSKKASTNSSINNMVSTVNSENSNVNNGSSLNGN-TSSNLKRKA 214
Query: 253 PVKHGIVDSKKHLITNEQDNNNK 321
V G D K+ + N+ ++ +
Sbjct: 215 NVTLG--DYKRLKVKNKNPSSQE 235
>SPBC32F12.10 |||phosphoglucomutase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 554
Score = 26.6 bits (56), Expect = 3.3
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 19 LKHSKSNGHAIPTNTHSKIMNVTKSQKEYDPSKEDP 126
+K++ NG P + KI ++TK+ EY K P
Sbjct: 125 IKYNLGNGGPAPESVTEKIYSITKTISEYKMVKIPP 160
>SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1334
Score = 26.2 bits (55), Expect = 4.4
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +1
Query: 64 HSKIMNVTKSQKEYDPSKEDPKKAEPLRTV 153
H + V +S + Y+ P+K EP RTV
Sbjct: 5 HPNALGVNESSRAYEEIFGAPRKREPARTV 34
>SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase
Hrp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1373
Score = 25.4 bits (53), Expect = 7.7
Identities = 16/71 (22%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +1
Query: 127 KKAEPLRTVKVSILQDDKEKANIKPNFSIQVKFTTDNKASKSPVKHGIVD-SKKHLITNE 303
+K++P K S+ DD++ + + FSI T+ + S K V+ +++ +
Sbjct: 131 RKSKPAPKQKKSVASDDEDAYDKRHRFSINSASGTEIRTSLRSSKGKSVNYNEQEFYDDF 190
Query: 304 QDNNNKTEEKM 336
+D + EE++
Sbjct: 191 EDEEEEVEEQV 201
>SPBC83.11 |||triose phosphate transporter|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 434
Score = 25.4 bits (53), Expect = 7.7
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = -1
Query: 197 FIFAFSLSSCKILTLTVLSGSAFLGSSFEGSYSFCDLVTFMILLCVFV 54
F+F S+ +L L+ L SFE S L+ +I C+FV
Sbjct: 116 FMFRHVYSAMTYFSLVPLTFGVTLACSFELSADIVGLLYALISTCIFV 163
>SPCC1672.11c |||P-type ATPase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1315
Score = 25.4 bits (53), Expect = 7.7
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 552 LYVIKIILFHNSFINLTTVKCPIVGIIIIA 641
+++I +I F S INL T+ PI III A
Sbjct: 538 MFIIALIGFVFSSINLLTLGVPIATIIIRA 567
>SPAC1420.01c ||SPAC56E4.08c|DUF1752 family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 580
Score = 25.4 bits (53), Expect = 7.7
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Frame = +1
Query: 166 LQDDKEKANIKPN-----FSIQVKFTTDNKASKSPVKHGIVDSK 282
+QDDK K +KPN F ++ F T + AS S + VDS+
Sbjct: 335 VQDDKSKQLLKPNPTQPYFYLRGSFDTGHSASSS-ICSAAVDSE 377
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 25.4 bits (53), Expect = 7.7
Identities = 24/117 (20%), Positives = 52/117 (44%), Gaps = 7/117 (5%)
Frame = +1
Query: 7 SSTALKHSKSNGHAIPTNTHSKIMNVTKSQKEYDPSKE-DPKKAEPLRTVKVSILQDDKE 183
++ ++K K P + + ++ +E + + + D EP++ K + + DD
Sbjct: 904 AAKSIKPQKPEPALKPVEGTADPKSTKRNHQETEKTADTDVSSTEPVKRQKTADVNDDVG 963
Query: 184 KANIKPNFSIQV---KFTTDNKAS---KSPVKHGIVDSKKHLITNEQDNNNKTEEKM 336
+ +K + S QV + T++ K+ KSP + D + +T E N+ + M
Sbjct: 964 EEEVKQSVSEQVDSAQLTSEPKSESLPKSPEEKS--DDTSNDVTTENTNDINGDSNM 1018
>SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 948
Score = 25.4 bits (53), Expect = 7.7
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 253 PVKHGIVDSKKHLITNEQDN 312
PV+HG+VDS+ + +D+
Sbjct: 137 PVRHGVVDSETKFVIERKDS 156
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,230,941
Number of Sequences: 5004
Number of extensions: 38491
Number of successful extensions: 129
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 129
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 313902888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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