Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_D12
(680 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81048-4|CAB02844.1| 219|Caenorhabditis elegans Hypothetical pr... 32 0.44
Z68217-1|CAA92465.1| 461|Caenorhabditis elegans Hypothetical pr... 31 1.0
AC006757-4|AAF60545.1| 610|Caenorhabditis elegans Hypothetical ... 31 1.0
AC006605-6|AAK85446.2| 495|Caenorhabditis elegans Clk-2 upstrea... 30 1.3
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 29 2.3
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 29 2.3
U41510-8|AAK39385.1| 493|Caenorhabditis elegans Hypothetical pr... 29 3.1
AF400666-1|AAL28025.1| 481|Caenorhabditis elegans CUX-7 protein. 29 3.1
AC006692-8|AAF39973.1| 431|Caenorhabditis elegans Hypothetical ... 29 4.1
Z93389-5|CAI79177.1| 212|Caenorhabditis elegans Hypothetical pr... 28 5.4
U97005-9|AAK72085.1| 829|Caenorhabditis elegans Hypothetical pr... 28 7.1
AC084158-19|AAK68582.1| 120|Caenorhabditis elegans Hypothetical... 28 7.1
AF000265-7|AAB52941.1| 893|Caenorhabditis elegans Hypothetical ... 27 9.4
>Z81048-4|CAB02844.1| 219|Caenorhabditis elegans Hypothetical
protein C41G7.6 protein.
Length = 219
Score = 31.9 bits (69), Expect = 0.44
Identities = 23/82 (28%), Positives = 38/82 (46%)
Frame = +1
Query: 88 KSQKEYDPSKEDPKKAEPLRTVKVSILQDDKEKANIKPNFSIQVKFTTDNKASKSPVKHG 267
K +++ D KED KK + K +DDK++A K S + K + +K K
Sbjct: 139 KDEEKKDDKKEDDKKGDKKDEKKDDEKKDDKKEAKSKSKKSKKSKKSKKSKREKKDEDKK 198
Query: 268 IVDSKKHLITNEQDNNNKTEEK 333
D K +++D+ K +EK
Sbjct: 199 DDDKKD---DDKKDDEKKDDEK 217
Score = 29.9 bits (64), Expect = 1.8
Identities = 22/82 (26%), Positives = 39/82 (47%)
Frame = +1
Query: 88 KSQKEYDPSKEDPKKAEPLRTVKVSILQDDKEKANIKPNFSIQVKFTTDNKASKSPVKHG 267
K ++ D K+D KK + + K +DD++K + K S K K+ KS +
Sbjct: 134 KDDEKKDEEKKDDKKEDDKKGDKKDEKKDDEKKDDKKEAKSKSKKSKKSKKSKKSKREKK 193
Query: 268 IVDSKKHLITNEQDNNNKTEEK 333
D K +++D++ K +EK
Sbjct: 194 DEDKKD---DDKKDDDKKDDEK 212
>Z68217-1|CAA92465.1| 461|Caenorhabditis elegans Hypothetical
protein F58G6.1 protein.
Length = 461
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = +1
Query: 316 NKTEEKMLXXXXXXXXXXXXIMNKDAEDNYKQITVCNKRYKSFDDYQSPLQAL 474
N+T+EK+L + ++ A + KQ C K +K +Y S L+ L
Sbjct: 14 NRTKEKLLEGIGKAKATQDEVFDQHAANLNKQSKSCEKLHKDVKNYSSALRTL 66
>AC006757-4|AAF60545.1| 610|Caenorhabditis elegans Hypothetical
protein Y40C7B.5 protein.
Length = 610
Score = 30.7 bits (66), Expect = 1.0
Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 1/98 (1%)
Frame = +1
Query: 157 VSILQDDKEKANIKPNFSIQVKFTTDNKASKSPVKHGIVDSKKHLITNEQDNNNKTEEKM 336
VS LQD+ +K+N +++ ++K K + + V +++I + D + TE M
Sbjct: 121 VSYLQDNSDKSNA----GYSIRYNKEDK--KYTIGNKDVSFNQNIIKIDSDEYDATEGLM 174
Query: 337 LXXXXXXXXXXXXIMNKDAEDNYKQITVC-NKRYKSFD 447
+ KD NY++I VC N Y FD
Sbjct: 175 ELLIKKSPNVNK--IQKDDTSNYQKILVCSNALYNGFD 210
>AC006605-6|AAK85446.2| 495|Caenorhabditis elegans Clk-2 upstream,
human gene xe7related protein 7 protein.
Length = 495
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/71 (23%), Positives = 35/71 (49%)
Frame = +1
Query: 127 KKAEPLRTVKVSILQDDKEKANIKPNFSIQVKFTTDNKASKSPVKHGIVDSKKHLITNEQ 306
K+AE R ++ L+ ++E+ NIK ++VK D+K + + K+ L +
Sbjct: 273 KRAEERRQIETERLRQEEEELNIKRQEELKVKQELDDKDRRREDRERKRREKRELERMAE 332
Query: 307 DNNNKTEEKML 339
+ + E++ L
Sbjct: 333 EEKKRLEKERL 343
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 29.5 bits (63), Expect = 2.3
Identities = 26/112 (23%), Positives = 47/112 (41%), Gaps = 1/112 (0%)
Frame = +1
Query: 1 VFSSTALKHSKSNGH-AIPTNTHSKIMNVTKSQKEYDPSKEDPKKAEPLRTVKVSILQDD 177
V ST L+ K +G T KI+ ++ + + +P++ + + V V + +
Sbjct: 12549 VDDSTVLEEKKDDGDDKSKPKTKKKIIKKKETPESEQVTAAEPEQ-QKISEVDVQSVAET 12607
Query: 178 KEKANIKPNFSIQVKFTTDNKASKSPVKHGIVDSKKHLITNEQDNNNKTEEK 333
+ A KP+ + K SKS S + T E+ N+KT +K
Sbjct: 12608 EVGAKKKPDAEKPTDLSKAKKDSKSKKSDEPEASTEEKSTTEKPTNDKTSKK 12659
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 29.5 bits (63), Expect = 2.3
Identities = 26/112 (23%), Positives = 47/112 (41%), Gaps = 1/112 (0%)
Frame = +1
Query: 1 VFSSTALKHSKSNGH-AIPTNTHSKIMNVTKSQKEYDPSKEDPKKAEPLRTVKVSILQDD 177
V ST L+ K +G T KI+ ++ + + +P++ + + V V + +
Sbjct: 12549 VDDSTVLEEKKDDGDDKSKPKTKKKIIKKKETPESEQVTAAEPEQ-QKISEVDVQSVAET 12607
Query: 178 KEKANIKPNFSIQVKFTTDNKASKSPVKHGIVDSKKHLITNEQDNNNKTEEK 333
+ A KP+ + K SKS S + T E+ N+KT +K
Sbjct: 12608 EVGAKKKPDAEKPTDLSKAKKDSKSKKSDEPEASTEEKSTTEKPTNDKTSKK 12659
>U41510-8|AAK39385.1| 493|Caenorhabditis elegans Hypothetical
protein ZC449.5 protein.
Length = 493
Score = 29.1 bits (62), Expect = 3.1
Identities = 20/100 (20%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Frame = +1
Query: 37 NGHAIPTNTHSKIMNVTKSQKEYDPSKEDPKKAEPLRTVKVSILQDDKEKANIKPNFSIQ 216
+ + PT+ S + K +KE K+D K + + D K K++ +
Sbjct: 281 SSESTPTSEESTEQSTEKPKKEDKKDKKDKKDKKQKKEDSEEDDDDKKSKSSSSSDSKTD 340
Query: 217 VKFTTDNKASKSPVKHGIVD-SKKHLITNEQDNNNKTEEK 333
K T+++ +S V+ +KK L + D++ +++
Sbjct: 341 EKSTSESDSSSEASSEKTVEGTKKTLFSGPPDSDEDDDDE 380
>AF400666-1|AAL28025.1| 481|Caenorhabditis elegans CUX-7 protein.
Length = 481
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/71 (22%), Positives = 35/71 (49%)
Frame = +1
Query: 127 KKAEPLRTVKVSILQDDKEKANIKPNFSIQVKFTTDNKASKSPVKHGIVDSKKHLITNEQ 306
K+AE R ++ L+ ++E+ NI+ ++VK D+K + + K+ L +
Sbjct: 273 KRAEERRQIETERLRQEEEELNIRRQEELKVKQELDDKDRRREDRERKRREKRELERMAE 332
Query: 307 DNNNKTEEKML 339
+ + E++ L
Sbjct: 333 EEKKRLEKERL 343
>AC006692-8|AAF39973.1| 431|Caenorhabditis elegans Hypothetical
protein T28F12.1 protein.
Length = 431
Score = 28.7 bits (61), Expect = 4.1
Identities = 19/76 (25%), Positives = 32/76 (42%)
Frame = +1
Query: 106 DPSKEDPKKAEPLRTVKVSILQDDKEKANIKPNFSIQVKFTTDNKASKSPVKHGIVDSKK 285
DP+ + P + VKV + D A P T + +SP K G+ D +
Sbjct: 347 DPTDKSIADKTPKKEVKVETPKKDGNMAKASPKVKKTPVKTPGKQPGRSPAKPGMEDVTQ 406
Query: 286 HLITNEQDNNNKTEEK 333
++ E+ + K+E K
Sbjct: 407 --LSQEKSKSLKSESK 420
>Z93389-5|CAI79177.1| 212|Caenorhabditis elegans Hypothetical
protein T13F3.8 protein.
Length = 212
Score = 28.3 bits (60), Expect = 5.4
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = +1
Query: 88 KSQKEYDPSKEDPKKAEPLRTVKVSILQDDKE-KANIKPNFSIQVKFTTDNKASKSPVKH 264
K +K+ + +KE KK EP + + + KE K + ++ + D+ K
Sbjct: 73 KVEKKPEENKEAEKKDEPKKEEEKKEEEKKKEEKKEEEKKEEVKEEEKKDDSKRDEKKKD 132
Query: 265 GIVDSKKHLITNEQDNNNKTEEK 333
G KK N++DN K EEK
Sbjct: 133 G---EKKEDDENKEDNEKKKEEK 152
Score = 27.5 bits (58), Expect = 9.4
Identities = 19/82 (23%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +1
Query: 88 KSQKEYDPSKEDPKKAEPLRTVKVSILQDDKEKANIKPNFSIQV--KFTTDNKASKSPVK 261
+ +KE + KE+ K+ E VK +DD ++ K + + + DN+ K K
Sbjct: 94 EEKKEEEKKKEEKKEEEKKEEVKEEEKKDDSKRDEKKKDGEKKEDDENKEDNEKKKEEKK 153
Query: 262 HGIVDSKKHLITNEQDNNNKTE 327
K+ ++ EQ +K +
Sbjct: 154 EDEKPKKEEIVPQEQKYTDKEQ 175
>U97005-9|AAK72085.1| 829|Caenorhabditis elegans Hypothetical protein
F19F10.9 protein.
Length = 829
Score = 27.9 bits (59), Expect = 7.1
Identities = 29/118 (24%), Positives = 48/118 (40%), Gaps = 11/118 (9%)
Frame = +1
Query: 19 LKHSKSNGHAIPTNTHSKIMNVTKSQ-KEYDPSKEDPKKAEPLRTVKVSILQDDKEKANI 195
L++ + H+ P+ H K + + +DP + KKA+ L + + EK +
Sbjct: 676 LQNPNAKSHSGPSLDHLKNKTTQRIDGQRFDPDDRNAKKADRLNSQHRGPVMPFAEKHDY 735
Query: 196 KPNFSIQVKFTTDNKASKSPVK----------HGIVDSKKHLITNEQDNNNKTEEKML 339
KP+ +I D K + K HG KK L ++ N EE+ML
Sbjct: 736 KPDVNISY---VDRKGREMDAKDAYRELSYKFHGRNPGKKQL--EKRANRKDKEERML 788
>AC084158-19|AAK68582.1| 120|Caenorhabditis elegans Hypothetical
protein Y69A2AR.8 protein.
Length = 120
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +1
Query: 67 SKIMNVTKSQKEYDPSKEDPKKAEPLRTVKVSILQD-DKEKA 189
SK T S+KE KE+PKK E +T + S + +KEK+
Sbjct: 74 SKSKKSTDSKKENKDQKEEPKKGEDEKTKEGSKQKSIEKEKS 115
>AF000265-7|AAB52941.1| 893|Caenorhabditis elegans Hypothetical
protein C18E3.3 protein.
Length = 893
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +1
Query: 244 SKSPVKHGIVDSKKHLITNEQDNNNKTEEKML 339
S+S K+G +DS+ + + EQ++ + +EE L
Sbjct: 501 SQSMEKYGYIDSENNYLEMEQEDTSNSEEDQL 532
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,101,528
Number of Sequences: 27780
Number of extensions: 205895
Number of successful extensions: 705
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 704
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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