Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_D12
         (680 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    27   0.17 
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    27   0.17 
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    27   0.17 
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    27   0.17 
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    25   0.88 
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    23   3.6  
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    22   4.7  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   6.2  

>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 27.1 bits (57), Expect = 0.17
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = -1

Query: 638 DYDYTNYRTFDSSQINE*IMKKNDFYNV 555
           +Y Y+NY  ++++  N    KK  +YN+
Sbjct: 88  NYKYSNYNNYNNNNYNNNNYKKLQYYNI 115


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 27.1 bits (57), Expect = 0.17
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = -1

Query: 638 DYDYTNYRTFDSSQINE*IMKKNDFYNV 555
           +Y Y+NY  ++++  N    KK  +YN+
Sbjct: 88  NYKYSNYNNYNNNNYNNNNYKKLQYYNI 115


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 27.1 bits (57), Expect = 0.17
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = -1

Query: 638 DYDYTNYRTFDSSQINE*IMKKNDFYNV 555
           +Y Y+NY  ++++  N    KK  +YN+
Sbjct: 88  NYKYSNYNNYNNNNYNNNNYKKLQYYNI 115


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 27.1 bits (57), Expect = 0.17
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = -1

Query: 638 DYDYTNYRTFDSSQINE*IMKKNDFYNV 555
           +Y Y+NY  ++++  N    KK  +YN+
Sbjct: 88  NYKYSNYNNYNNNNYNNNNYKKLQYYNI 115


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 10/33 (30%), Positives = 20/33 (60%)
 Frame = +1

Query: 7   SSTALKHSKSNGHAIPTNTHSKIMNVTKSQKEY 105
           +ST+   S++N   +P N + K +N+   ++EY
Sbjct: 430 NSTSAGFSQTNKTWLPVNENYKSLNLAAQKREY 462


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -1

Query: 647 QFGDYDYTNYRTFDSSQ 597
           Q G+YDYT    FD  Q
Sbjct: 59  QSGEYDYTKNYPFDVDQ 75


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
 Frame = -1

Query: 212 IEKLGFIFAFSLSSC--KILTLTVLSGSAFLGSS--FEGSYSFCDLVTFMILLCVFV 54
           I+ L FIF F  + C   ILTL VL     LG S   E   +F  +   ++   +FV
Sbjct: 8   IKYLLFIFNFVFAVCGLGILTLGVLIHLQILGVSKQIETGLAFPSITLIVLGSIIFV 64


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 250 SPVKHGIVDSKKHLITNEQDNNNKTEE 330
           SP++  I  S+  + T     N+KTEE
Sbjct: 294 SPIEPEIEISQNSVSTGSDKENHKTEE 320


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,958
Number of Sequences: 438
Number of extensions: 2882
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20708550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)