Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_D09
         (357 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23520-3|AAC46555.2|  470|Caenorhabditis elegans Hypothetical pr...    50   4e-07
U23520-2|AAR25655.1|  485|Caenorhabditis elegans Hypothetical pr...    50   4e-07
U80448-6|AAO12417.1|  687|Caenorhabditis elegans Hypothetical pr...    27   2.9  
U80448-5|AAB37819.1|  975|Caenorhabditis elegans Hypothetical pr...    27   2.9  
U64844-11|AAB18311.1|  482|Caenorhabditis elegans Hypothetical p...    27   5.1  
Z92784-3|CAB07194.1|  318|Caenorhabditis elegans Hypothetical pr...    26   8.9  

>U23520-3|AAC46555.2|  470|Caenorhabditis elegans Hypothetical
           protein C35B8.3a protein.
          Length = 470

 Score = 50.4 bits (115), Expect = 4e-07
 Identities = 22/45 (48%), Positives = 32/45 (71%)
 Frame = +2

Query: 131 RFLSSAEISTALRPFYFSVHPDLFGKYPEQRSINEHSLQQLSAFI 265
           R +SS E++ ALRPF F VHPD + K+PE ++ NE SLQ  + ++
Sbjct: 17  RCISSNEVAQALRPFLFLVHPDKYAKFPEIQTQNEKSLQIFNGYM 61


>U23520-2|AAR25655.1|  485|Caenorhabditis elegans Hypothetical
           protein C35B8.3b protein.
          Length = 485

 Score = 50.4 bits (115), Expect = 4e-07
 Identities = 22/45 (48%), Positives = 32/45 (71%)
 Frame = +2

Query: 131 RFLSSAEISTALRPFYFSVHPDLFGKYPEQRSINEHSLQQLSAFI 265
           R +SS E++ ALRPF F VHPD + K+PE ++ NE SLQ  + ++
Sbjct: 32  RCISSNEVAQALRPFLFLVHPDKYAKFPEIQTQNEKSLQIFNGYM 76


>U80448-6|AAO12417.1|  687|Caenorhabditis elegans Hypothetical
           protein F59A3.2b protein.
          Length = 687

 Score = 27.5 bits (58), Expect = 2.9
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +2

Query: 149 EISTALRPFYFSVHPDLFGKYPEQRSINEHSLQQLSAFI 265
           ++   ++P Y S    LF   P  +S+  H+L QL  F+
Sbjct: 422 DVCEKMKPSYLSQLTTLFSSSPSDQSMLAHTLLQLLRFV 460


>U80448-5|AAB37819.1|  975|Caenorhabditis elegans Hypothetical
           protein F59A3.2a protein.
          Length = 975

 Score = 27.5 bits (58), Expect = 2.9
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +2

Query: 149 EISTALRPFYFSVHPDLFGKYPEQRSINEHSLQQLSAFI 265
           ++   ++P Y S    LF   P  +S+  H+L QL  F+
Sbjct: 422 DVCEKMKPSYLSQLTTLFSSSPSDQSMLAHTLLQLLRFV 460


>U64844-11|AAB18311.1|  482|Caenorhabditis elegans Hypothetical
           protein T22F3.8 protein.
          Length = 482

 Score = 26.6 bits (56), Expect = 5.1
 Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
 Frame = +1

Query: 73  LENV*PNKNTMRLRKRCDLSFFKLSRN--IYCV 165
           L+++  NK+   L K+CD+ + KL+ +  I CV
Sbjct: 250 LQSIQKNKSEAHLSKKCDVPYIKLATSPVILCV 282


>Z92784-3|CAB07194.1|  318|Caenorhabditis elegans Hypothetical
           protein F31C3.4 protein.
          Length = 318

 Score = 25.8 bits (54), Expect = 8.9
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 25  TFLFCETFDFLPHPIH 72
           TFL+  TF+ +PH +H
Sbjct: 273 TFLYITTFEVIPHELH 288


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,819,481
Number of Sequences: 27780
Number of extensions: 135955
Number of successful extensions: 300
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 299
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 300
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 482051610
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)