Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_D09
         (357 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY739658-1|AAU85297.1|  664|Apis mellifera hyperpolarization-act...    26   0.12 
AY280848-1|AAQ16312.1|  632|Apis mellifera hyperpolarization-act...    26   0.12 
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     22   2.5  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   3.3  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   3.3  
AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex det...    21   4.4  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    20   7.6  

>AY739658-1|AAU85297.1|  664|Apis mellifera
           hyperpolarization-activated ion channelvariant L
           protein.
          Length = 664

 Score = 26.2 bits (55), Expect = 0.12
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -3

Query: 70  ELDAEGNRTFHKIEKYSLDNY 8
           EL  EG R FHK + +  D+Y
Sbjct: 643 ELSREGRRIFHKSDTFHKDSY 663


>AY280848-1|AAQ16312.1|  632|Apis mellifera
           hyperpolarization-activated ion channel protein.
          Length = 632

 Score = 26.2 bits (55), Expect = 0.12
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -3

Query: 70  ELDAEGNRTFHKIEKYSLDNY 8
           EL  EG R FHK + +  D+Y
Sbjct: 611 ELSREGRRIFHKSDTFHKDSY 631


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 2.5
 Identities = 13/20 (65%), Positives = 13/20 (65%)
 Frame = +2

Query: 140 SSAEISTALRPFYFSVHPDL 199
           SSAE  TAL  FYF VH  L
Sbjct: 92  SSAEHFTALGNFYF-VHESL 110


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 3.3
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = +1

Query: 37  CETFDFLPHPIHLENV*PNKNTMRLR 114
           CE   FL  P+  E   PNK    L+
Sbjct: 229 CEDMRFLDEPLSGETNDPNKTEYTLK 254


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 3.3
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = +1

Query: 37  CETFDFLPHPIHLENV*PNKNTMRLR 114
           CE   FL  P+  E   PNK    L+
Sbjct: 229 CEDMRFLDEPLSGETNDPNKTEYTLK 254


>AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex
           determiner protein.
          Length = 385

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +1

Query: 166 KTVLLQRTSRSLWKISRTKKYQ*TFTSTTQRFYRSST 276
           K +L +RTSR  +  SR ++ +      + R YR ++
Sbjct: 260 KKLLEERTSRKRYSRSREREQKSYKNENSYRKYRETS 296


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = +1

Query: 172 VLLQRTSRSLWKISRTKKYQ*TFTSTTQRFYRSST 276
           +L +RTSR  +  SR ++ +      + R YR ++
Sbjct: 262 LLEERTSRKRYSCSREREQKSYKNENSYRKYRETS 296


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,656
Number of Sequences: 438
Number of extensions: 1724
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8308335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)