Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_D02
(657 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_07_0065 - 40851101-40851247,40851352-40851495,40851781-408518... 53 2e-07
11_06_0013 - 19252779-19252805,19252947-19253090,19253572-192536... 49 3e-06
02_04_0050 - 19245087-19245113,19245306-19245449,19245546-192456... 47 2e-05
05_01_0406 + 3197189-3197389,3197491-3197628,3198463-3198544,319... 36 0.028
08_02_0933 + 22740123-22740364,22741952-22742390,22743060-227431... 33 0.15
07_01_0895 + 7506460-7507929 30 1.4
05_03_0625 - 16325827-16326495 30 1.4
05_03_0617 - 16257281-16257943 30 1.4
04_03_0825 - 20092781-20092801,20092844-20093079,20093166-200932... 30 1.9
03_02_0161 + 6046949-6047063,6048759-6048844,6049029-6049094,604... 29 3.3
01_05_0627 + 23802235-23802853,23803357-23803430,23804207-238043... 29 3.3
05_03_0458 + 14280953-14281866,14281964-14282912 29 4.3
01_01_0245 + 2013821-2014171,2014278-2014671,2015158-2015289,201... 29 4.3
09_02_0049 + 3566622-3566666,3567362-3567545,3567865-3568007,356... 28 5.7
07_03_0708 - 20865786-20867153 28 5.7
05_02_0119 + 6793292-6793613,6795793-6795952,6796416-6796458,679... 28 7.5
11_06_0610 - 25449085-25453284 27 9.9
11_02_0049 - 7751779-7751925,7752046-7752189,7752398-7752489,775... 27 9.9
09_04_0666 + 19318512-19318578,19319185-19319273,19321344-193221... 27 9.9
05_01_0129 - 872127-872681,872762-873070,873180-873347 27 9.9
>01_07_0065 -
40851101-40851247,40851352-40851495,40851781-40851872,
40851954-40852035,40852127-40852193,40852284-40852375,
40852470-40852586,40852764-40852881,40852969-40853161,
40853258-40853339,40853607-40853744,40853829-40854023
Length = 488
Score = 53.2 bits (122), Expect = 2e-07
Identities = 60/226 (26%), Positives = 93/226 (41%), Gaps = 25/226 (11%)
Frame = +3
Query: 6 QRLAAMYLIVGTLECAFMRST--HNITPGRSLFRDISAGWQQWLATISLVSIQVCITLLL 179
QR+A YL+V LE + + G S+FR + QW+ ++ I + + +
Sbjct: 164 QRIALAYLVVAVLEIVTKNAKVQDQSSSGFSIFRMY---FSQWIVACCILVIYLSLVYGI 220
Query: 180 AAPGCP---RGYMGPG-GRHMSETTNTTLQ-NCTGGIAGYIDRMVLGPEHLYKGGTFKSL 344
P P G+ ++ T T + + GYIDR VLG H+Y ++
Sbjct: 221 YVPDWDFRVSDVKNPNFGKILTVTCGTRGKLSPPCNAVGYIDRKVLGINHMYHRPAWRRH 280
Query: 345 YDTV------------------VPHDPEGILGIFSGVLVVQAGAHATRIMLAYNHARARI 470
D P +PEG+L S VL G H +++ H ++
Sbjct: 281 KDCTDDSPHEGPFKTDSPAWCYAPFEPEGLLSSLSAVLSTIIGVHYGHVLV---HMKSHT 337
Query: 471 MRWVFWSIVFGVTGGALCMFSKNGGPIPVNKNLWSVSYCLVTASXA 608
R WSI+ G+T L + IP+NK L++ SY VTA A
Sbjct: 338 DRLKQWSIM-GITLLILGLTLHFSHAIPLNKQLYTFSYICVTAGAA 382
>11_06_0013 -
19252779-19252805,19252947-19253090,19253572-19253663,
19253757-19253835,19253965-19254031,19254163-19254254,
19254986-19255102,19255254-19255365,19255479-19255594,
19255680-19255756,19255912-19255993,19256077-19256214,
19258806-19259009
Length = 448
Score = 49.2 bits (112), Expect = 3e-06
Identities = 60/234 (25%), Positives = 87/234 (37%), Gaps = 24/234 (10%)
Frame = +3
Query: 6 QRLAAMYLIVGTLECAFMR--STHNITPGRSLFRDISAGWQQWLATISLVSIQVCITLLL 179
QR+A YL+V E R S NI G L I+ Q + LV + I L
Sbjct: 167 QRIAIAYLVVALCEIWLRRVSSGGNIGSGSML---ITRYHHQMFVGLVLVVTYLVILYGL 223
Query: 180 AAPGCPRGYMGPGGRHMSETTNTTLQNCTG---GIAGYIDRMVLGPEHLYKGGTFKSLYD 350
P P ++ TG G IDR VLG +HLY +
Sbjct: 224 HVPDWEYEVTSPDSTVKHFLVKCGVKGDTGPGCNAVGMIDRSVLGIQHLYAHPVYLKTEQ 283
Query: 351 TVV------------------PHDPEGILGIFSGVLVVQAGAHATRIMLAYNHARARIMR 476
+ P DPEG+L ++ G +++ + RI R
Sbjct: 284 CSMASPRNGPLPPNAPSWCEAPFDPEGLLSSLMAIVTCLIGLQIGHVIVHFKKHNERIKR 343
Query: 477 WVFWSIVFGVTGGALCMFSKNGGPIPVNKNLWSVSY-CLVTASXALFITGDALL 635
W S+ G +L +F + +NK+L+S+SY C+ T + LF LL
Sbjct: 344 WSILSLCLLTLGFSLHLFG-----LHMNKSLYSLSYTCVTTGTAGLFFVAIYLL 392
>02_04_0050 -
19245087-19245113,19245306-19245449,19245546-19245637,
19245733-19245811,19245902-19245968,19246084-19246175,
19246267-19246383,19246472-19246583,19246884-19246990,
19247113-19247189,19247351-19247432,19247526-19247663,
19248176-19248234,19249155-19249233
Length = 423
Score = 46.8 bits (106), Expect = 2e-05
Identities = 51/222 (22%), Positives = 89/222 (40%), Gaps = 21/222 (9%)
Frame = +3
Query: 6 QRLAAMYLIVGTLECAFMRSTHNITPGRSLFRDISAGWQQWLATISLVSIQVCITLLLAA 185
QR+A YL+ E +++ ++ G + R Q + + L ++ I +
Sbjct: 145 QRIAIAYLLAAICEI-WLKGDDDVDCGLDVIRRYR---YQLVVALLLSTMYTVILNGVYV 200
Query: 186 PGCPRGYMGPGGRHMSETTNTTLQNCTG---GIAGYIDRMVLGPEHLYKGGTFKSLYDTV 356
P GPG S + ++ TG G +DR +LG +HLY+ +
Sbjct: 201 PDWEYQISGPGSTEKSFSVRCGVRGDTGPACNAVGMLDRTILGIDHLYRRPVYARTKQCS 260
Query: 357 V------------------PHDPEGILGIFSGVLVVQAGAHATRIMLAYNHARARIMRWV 482
+ P DPEG+L ++ G I++ + + RI+ W+
Sbjct: 261 INYPQNGPLPPDAPSWCQAPFDPEGLLSSVMAIVTCLIGLQFGHIIIHFEKHKGRIINWL 320
Query: 483 FWSIVFGVTGGALCMFSKNGGPIPVNKNLWSVSYCLVTASXA 608
S F + A FS + I +NK L+++SY L T+ A
Sbjct: 321 IPS--FSMLALA---FSMDFIGIRMNKPLYTISYALATSGAA 357
>05_01_0406 +
3197189-3197389,3197491-3197628,3198463-3198544,
3198658-3198734,3198829-3198935,3199367-3199505,
3200602-3200718,3200850-3200941,3201096-3201162,
3201249-3201355,3201468-3201546,3201751-3201894,
3202095-3202235
Length = 496
Score = 35.9 bits (79), Expect = 0.028
Identities = 34/137 (24%), Positives = 56/137 (40%), Gaps = 24/137 (17%)
Frame = +3
Query: 279 GYIDRMVLGPEHLYKGGTFKSLYDTVV------------------PHDPEGILGIFSGVL 404
G++DR++LG HLYK +K + V P DPEG+L +
Sbjct: 265 GFVDRVLLGENHLYKNPVYKRTKECSVNSPDYGPLPPNAPDWCLAPFDPEGLLSTLMAAV 324
Query: 405 VVQAGAHATRIMLAYNHARARIMRWVFWSIVFGVTGGAL------CMFSKNGGPIPVNKN 566
G H +++ H + + F S T A+ C+ S ++K
Sbjct: 325 TCFVGLHFGHVLV---HCKTSL---TFASTTGSFTSNAIMATSFHCVNSLRISTSVISKP 378
Query: 567 LWSVSYCLVTASXALFI 617
L++VSY L+T + F+
Sbjct: 379 LYTVSYMLLTGGVSGFL 395
>08_02_0933 +
22740123-22740364,22741952-22742390,22743060-22743172,
22743470-22743575
Length = 299
Score = 33.5 bits (73), Expect = 0.15
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +1
Query: 310 NTCTRVAPSNPCTIPWFPTTLRASWAYSPVC-WSSRPVPTRPGSCWPTT 453
+TC R APSN T+P +L A +P+C W G WP+T
Sbjct: 140 HTCPRFAPSNQATLPSHRGSLSQGPASTPICRWRLARREGIRGWWWPST 188
>07_01_0895 + 7506460-7507929
Length = 489
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 351 TVVPHDPEGILGIFSGVLVVQAGAHATRIM 440
TVV H PEG+LG++ V + GA+ ++
Sbjct: 214 TVVRHLPEGLLGVYDFVAAIAVGANRLYVL 243
>05_03_0625 - 16325827-16326495
Length = 222
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 319 TRVAPSNPCTIPWFPTTLRASWAYSPVCW 405
T ++PS+P P+ PT LR WA PV W
Sbjct: 31 TALSPSSP---PFHPTRLRIRWAPPPVGW 56
>05_03_0617 - 16257281-16257943
Length = 220
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 319 TRVAPSNPCTIPWFPTTLRASWAYSPVCW 405
T ++PS+P P+ PT LR WA PV W
Sbjct: 31 TALSPSSP---PFHPTRLRIRWAPPPVGW 56
>04_03_0825 -
20092781-20092801,20092844-20093079,20093166-20093244,
20093344-20093482,20093533-20093624,20093714-20093830,
20093930-20094041,20094154-20094260,20094351-20094427,
20094517-20094598,20094702-20094839,20095495-20095608
Length = 437
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/64 (28%), Positives = 31/64 (48%)
Frame = +3
Query: 417 GAHATRIMLAYNHARARIMRWVFWSIVFGVTGGALCMFSKNGGPIPVNKNLWSVSYCLVT 596
G +++ + + RIM+W+ S + +L F + +NK L++VSY L T
Sbjct: 315 GLQYGHVIVHFQKHKERIMKWLIPSFSMLILAFSLDFFGMH-----MNKPLYTVSYALAT 369
Query: 597 ASXA 608
A A
Sbjct: 370 AGAA 373
>03_02_0161 +
6046949-6047063,6048759-6048844,6049029-6049094,
6049408-6049860,6049960-6050115,6050319-6050465,
6050570-6050641,6050730-6051293
Length = 552
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -2
Query: 329 ATLVQVFWSQHHSVNVPSDAAGAVLQGRVRRFRHVTTP 216
ATL ++ SQ VP DA A L+ ++ +RH TP
Sbjct: 112 ATLRRIHSSQKDEEVVPFDAIIAPLESDIKAYRHEVTP 149
>01_05_0627 +
23802235-23802853,23803357-23803430,23804207-23804364,
23804640-23804964
Length = 391
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -1
Query: 546 GHRSSRTCTEPHRSHRRLSTRTPNALYEPW 457
G R+S C+ SH + STRT ++ PW
Sbjct: 48 GRRTSTACSAERLSHVKSSTRTSSSRPAPW 77
>05_03_0458 + 14280953-14281866,14281964-14282912
Length = 620
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = -3
Query: 427 AWAPAWTTSTPENMPRMPSGSWGTTVSYKDLKVPP-LYKCSGPSTIRSMYPAMPPVQ 260
++ P S+ N P S T S VPP L S PS+ S P +PP+Q
Sbjct: 16 SYGPTSPPSSCRNAAPSPPSSNSTPTSSTTPTVPPSLTTTSSPSSSPSSPPPLPPLQ 72
>01_01_0245 +
2013821-2014171,2014278-2014671,2015158-2015289,
2015747-2015788,2016096-2017057
Length = 626
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = +1
Query: 319 TRVAPSNPCTIPWFPTTLRASWAYSPVCWSSRPVPTRPGSCWPTTMP 459
T A C IP F TT+ A Y W+S P PG+C ++P
Sbjct: 103 TTFAGDADCPIPDFNTTMGA---YISDRWNSTPPSGIPGNCISVSLP 146
>09_02_0049 +
3566622-3566666,3567362-3567545,3567865-3568007,
3568085-3568148,3571965-3572089,3572430-3572485,
3573364-3573432,3574984-3575169,3575320-3575407
Length = 319
Score = 28.3 bits (60), Expect = 5.7
Identities = 25/75 (33%), Positives = 30/75 (40%), Gaps = 2/75 (2%)
Frame = +2
Query: 77 HPRSVPFPRHL--RWMAAMARDNIACLYSGMHHATTGRPRLPPRVHGPRGSSHVGNDEHD 250
H RS+ L RW AA ++ H A + RP L VH P G H+ DE
Sbjct: 31 HERSIIAEDDLDNRWQAATGEAVSEVIFLSKHTAVSNRPAL--TVH-PIGVPHLREDETP 87
Query: 251 PAELHRRHRWVH*PN 295
P R W PN
Sbjct: 88 PQ--GGRPGWAALPN 100
>07_03_0708 - 20865786-20867153
Length = 455
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -2
Query: 560 VNGYRATVLREHAQSPTGHTEDYR 489
+NG+RAT+ R H SP H+E R
Sbjct: 25 LNGFRATLTRIHQLSPGKHSEAVR 48
>05_02_0119 +
6793292-6793613,6795793-6795952,6796416-6796458,
6797015-6797335
Length = 281
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -3
Query: 433 LVAWAPAWTTSTPENMPRMPSGSW 362
LVAW A TS E RM SG W
Sbjct: 29 LVAWGGAQRTSPVEAAARMESGGW 52
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 27.5 bits (58), Expect = 9.9
Identities = 19/46 (41%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = -3
Query: 400 TPENMPRMPSGSWGTTVS-YKDLKVPPLYKCSGPSTIRSMYPAMPP 266
TPE P PSG GT S K PP S P +S P PP
Sbjct: 817 TPEKSPSPPSGHEGTPPSPVKSSSPPPEAHVSSPPPEKSSSP--PP 860
>11_02_0049 -
7751779-7751925,7752046-7752189,7752398-7752489,
7752745-7752811,7753148-7753264,7753318-7753462,
7753574-7753689,7753789-7753865,7753995-7754076,
7754180-7754317,7754781-7754999
Length = 447
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 531 SKNGGPIPVNKNLWSVSYCLVTASXA 608
S++ IP+NK L+S+SY TA A
Sbjct: 316 SRSFQAIPINKQLYSLSYVCFTAGAA 341
>09_04_0666 +
19318512-19318578,19319185-19319273,19321344-19322171,
19322264-19322419,19322507-19322881
Length = 504
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = -2
Query: 353 GIVQGFEGATLVQVFWSQHHSVNVPSDAAGAVLQGRVRR 237
G + G+ G L + WS HS+ DAA A R R
Sbjct: 40 GKIMGYSGLNLPEDIWSHIHSLMPLRDAARAACVSRAFR 78
>05_01_0129 - 872127-872681,872762-873070,873180-873347
Length = 343
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/46 (30%), Positives = 17/46 (36%)
Frame = -2
Query: 488 PEHPTHYTSPGMVVGQHDPGRVGTGLDDQHTGEYAQDALRVVGNHG 351
P T Y +P HD G V DD A D ++ V G
Sbjct: 120 PHRDTEYYAPKKKKKNHDAGAVAVEDDDDELATVAHDKIKHVRERG 165
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,035,476
Number of Sequences: 37544
Number of extensions: 614393
Number of successful extensions: 1983
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1977
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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