Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_D02
         (657 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    24   1.5  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   1.9  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    23   3.4  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    22   5.9  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    21   7.8  

>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 141 SLVSIQVCITLLLAAPGCPRG 203
           +LV++ +C T  LAAP  P G
Sbjct: 1   ALVAVVLCTTATLAAPQRPSG 21


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 188 RLPPRVHGPRGSSHVGNDEHDP 253
           RL  R+H  RGS H G++   P
Sbjct: 302 RLTLRIHRGRGSVHNGSNNGSP 323


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 461 PGMVVGQHDPGRVGT 417
           P  V+G HD  RVGT
Sbjct: 353 PNWVMGNHDRVRVGT 367


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +3

Query: 552 PVNKNLWSVSYCLVTASXALFITGDALLRRG 644
           P+    + VS CLVT + AL +    L  RG
Sbjct: 273 PLISLYYGVSICLVTFASALAVVTLNLHHRG 303


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +3

Query: 492 IVFGVTGGALCMFSKNGG 545
           +V G +GG++ + + NGG
Sbjct: 30  VVTGASGGSIVVGANNGG 47


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,469
Number of Sequences: 438
Number of extensions: 5400
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19734030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)