Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_C20
(459 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L07517-1|AAA35866.1| 169|Homo sapiens mucin protein. 31 2.5
L07518-1|AAB61945.1| 505|Homo sapiens mucin protein. 30 3.3
BC093660-1|AAH93660.1| 931|Homo sapiens transient receptor pote... 29 5.8
BC093658-1|AAH93658.1| 931|Homo sapiens transient receptor pote... 29 5.8
AJ271068-1|CAC01686.1| 876|Homo sapiens transient receptor pote... 29 5.8
AJ271067-1|CAC01685.1| 815|Homo sapiens transient receptor pote... 29 5.8
AJ271066-1|CAC01684.1| 931|Homo sapiens transient receptor pote... 29 5.8
AJ006276-1|CAA06943.1| 931|Homo sapiens transient receptor pote... 29 5.8
AF080394-1|AAC63289.2| 931|Homo sapiens transient receptor pote... 29 5.8
AB058756-1|BAB47482.1| 708|Homo sapiens KIAA1853 protein protein. 29 5.8
>L07517-1|AAA35866.1| 169|Homo sapiens mucin protein.
Length = 169
Score = 30.7 bits (66), Expect = 2.5
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +1
Query: 7 TTTTISVPKHSPLKTCQIFLKFRTSTLSVPEWTTCSRTRLVHLRPPLTP 153
+T T+ P H+ + T T T ++P TT T H PP+TP
Sbjct: 67 STHTVITPTHAQMATSASI--HSTPTGTIPPLTTLMNTGSTHTAPPVTP 113
>L07518-1|AAB61945.1| 505|Homo sapiens mucin protein.
Length = 505
Score = 30.3 bits (65), Expect = 3.3
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +1
Query: 7 TTTTISVPKHSPLKTCQIFLKFRTSTLSVPEWTTCSRTRLVHLRPPLTP 153
+T T+ P H+ + T T T+ P TT T H PP+TP
Sbjct: 8 STHTVIAPTHAQMATSASIHSAPTGTIPPP--TTLKATGSTHTAPPITP 54
>BC093660-1|AAH93660.1| 931|Homo sapiens transient receptor
potential cation channel, subfamily C, member 6 protein.
Length = 931
Score = 29.5 bits (63), Expect = 5.8
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 7/53 (13%)
Frame = -3
Query: 313 KYLENEKL-VLGSHEDL------MKGVSNFFQPALKSSDVVGVLKRFSFPPRE 176
K E +KL +LGSHEDL K V + QP+++SS+ L F+ PPR+
Sbjct: 803 KINEEKKLGILGSHEDLSKLSLDKKQVGHNKQPSIRSSEDFH-LNSFNNPPRQ 854
>BC093658-1|AAH93658.1| 931|Homo sapiens transient receptor
potential cation channel, subfamily C, member 6 protein.
Length = 931
Score = 29.5 bits (63), Expect = 5.8
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 7/53 (13%)
Frame = -3
Query: 313 KYLENEKL-VLGSHEDL------MKGVSNFFQPALKSSDVVGVLKRFSFPPRE 176
K E +KL +LGSHEDL K V + QP+++SS+ L F+ PPR+
Sbjct: 803 KINEEKKLGILGSHEDLSKLSLDKKQVGHNKQPSIRSSEDFH-LNSFNNPPRQ 854
>AJ271068-1|CAC01686.1| 876|Homo sapiens transient receptor
potential channel 6, variant delta377-431 protein.
Length = 876
Score = 29.5 bits (63), Expect = 5.8
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 7/53 (13%)
Frame = -3
Query: 313 KYLENEKL-VLGSHEDL------MKGVSNFFQPALKSSDVVGVLKRFSFPPRE 176
K E +KL +LGSHEDL K V + QP+++SS+ L F+ PPR+
Sbjct: 748 KINEEKKLGILGSHEDLSKLSLDKKQVGHNKQPSIRSSEDFH-LNSFNNPPRQ 799
>AJ271067-1|CAC01685.1| 815|Homo sapiens transient receptor
potential channel 6, variant delta316-431 protein.
Length = 815
Score = 29.5 bits (63), Expect = 5.8
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 7/53 (13%)
Frame = -3
Query: 313 KYLENEKL-VLGSHEDL------MKGVSNFFQPALKSSDVVGVLKRFSFPPRE 176
K E +KL +LGSHEDL K V + QP+++SS+ L F+ PPR+
Sbjct: 687 KINEEKKLGILGSHEDLSKLSLDKKQVGHNKQPSIRSSEDFH-LNSFNNPPRQ 738
>AJ271066-1|CAC01684.1| 931|Homo sapiens transient receptor
potential channel 6 protein.
Length = 931
Score = 29.5 bits (63), Expect = 5.8
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 7/53 (13%)
Frame = -3
Query: 313 KYLENEKL-VLGSHEDL------MKGVSNFFQPALKSSDVVGVLKRFSFPPRE 176
K E +KL +LGSHEDL K V + QP+++SS+ L F+ PPR+
Sbjct: 803 KINEEKKLGILGSHEDLSKLSLDKKQVGHNKQPSIRSSEDFH-LNSFNNPPRQ 854
>AJ006276-1|CAA06943.1| 931|Homo sapiens transient receptor
potential protein protein.
Length = 931
Score = 29.5 bits (63), Expect = 5.8
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 7/53 (13%)
Frame = -3
Query: 313 KYLENEKL-VLGSHEDL------MKGVSNFFQPALKSSDVVGVLKRFSFPPRE 176
K E +KL +LGSHEDL K V + QP+++SS+ L F+ PPR+
Sbjct: 803 KINEEKKLGILGSHEDLSKLSLDKKQVGHNKQPSIRSSEDFH-LNSFNNPPRQ 854
>AF080394-1|AAC63289.2| 931|Homo sapiens transient receptor
potential protein 6 protein.
Length = 931
Score = 29.5 bits (63), Expect = 5.8
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 7/53 (13%)
Frame = -3
Query: 313 KYLENEKL-VLGSHEDL------MKGVSNFFQPALKSSDVVGVLKRFSFPPRE 176
K E +KL +LGSHEDL K V + QP+++SS+ L F+ PPR+
Sbjct: 803 KINEEKKLGILGSHEDLSKLSLDKKQVGHNKQPSIRSSEDFH-LNSFNNPPRQ 854
>AB058756-1|BAB47482.1| 708|Homo sapiens KIAA1853 protein protein.
Length = 708
Score = 29.5 bits (63), Expect = 5.8
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -1
Query: 183 PESSRYDQRHRCERRSQMHQSCP*TCSPLRHR 88
P S + HRC RSQ +S P +C RHR
Sbjct: 274 PRKSHRHRHHRCPSRSQSSESRPSSCES-RHR 304
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,279,601
Number of Sequences: 237096
Number of extensions: 1223686
Number of successful extensions: 2528
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2470
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2528
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3872123864
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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