Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_C19
         (681 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismuta...   165   9e-43
AY745232-1|AAU93511.1|   75|Anopheles gambiae SOD3A protein.          105   1e-24
AY745233-1|AAU93512.1|  100|Anopheles gambiae SOD3B protein.           97   5e-22
AJ439060-9|CAD27760.1|  348|Anopheles gambiae putative translati...    25   2.2  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   6.7  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   8.9  

>AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismutase
           2 protein.
          Length = 211

 Score =  165 bits (402), Expect = 9e-43
 Identities = 77/152 (50%), Positives = 98/152 (64%), Gaps = 2/152 (1%)
 Frame = +1

Query: 82  PAKAVCVLHGD--VSGTVFFDQKDESSPVVVSGEVKGLSKGKHGFHVHEFGDNTNGCTSA 255
           P KA+  L G   VSG V   Q   + PV +   V GL+ GKHGFH+HE GD T+GC S 
Sbjct: 20  PRKAIVYLQGTSGVSGNVTISQPSCTEPVFIDINVVGLTPGKHGFHIHEKGDLTDGCAST 79

Query: 256 GAHFNPLKQEHGAPDSDTRHIGDLGNIEASSDGGVTKVCIQDSQISLVGPNSIVGRTLVV 435
           G H+NP K  HGAP+   RH+GDLGNI A+ + G+ K    D+ +SL G  S++GR +V+
Sbjct: 80  GGHYNPDKVSHGAPNDQVRHVGDLGNI-AADENGIAKTSYSDTVVSLYGARSVIGRAIVI 138

Query: 436 HADPDDLGLGGHELSKSTGNAGARIACGVIGL 531
           HA+ DDLG   H  S  TGNAG R+ACGVIG+
Sbjct: 139 HAEVDDLGKTNHPDSLKTGNAGGRVACGVIGI 170


>AY745232-1|AAU93511.1|   75|Anopheles gambiae SOD3A protein.
          Length = 75

 Score =  105 bits (252), Expect = 1e-24
 Identities = 50/76 (65%), Positives = 62/76 (81%)
 Frame = +1

Query: 313 HIGDLGNIEASSDGGVTKVCIQDSQISLVGPNSIVGRTLVVHADPDDLGLGGHELSKSTG 492
           H GD+GNI A  + G  KV +  +QI+L G  ++VGR+LVVHADPDDLG+GGHELSK+TG
Sbjct: 1   HAGDMGNIVAD-ENGEAKVDLTATQIALSGALNVVGRSLVVHADPDDLGVGGHELSKTTG 59

Query: 493 NAGARIACGVIGLAKI 540
           +AGAR+ACGVIGL KI
Sbjct: 60  DAGARLACGVIGLCKI 75


>AY745233-1|AAU93512.1|  100|Anopheles gambiae SOD3B protein.
          Length = 100

 Score = 97.1 bits (231), Expect = 5e-22
 Identities = 46/91 (50%), Positives = 63/91 (69%)
 Frame = +1

Query: 265 FNPLKQEHGAPDSDTRHIGDLGNIEASSDGGVTKVCIQDSQISLVGPNSIVGRTLVVHAD 444
           +NP   +HGAPD    H+GDLGNI A S G + K+ I + +++LVG  SI+GRTL +   
Sbjct: 1   YNPDGNDHGAPDDANCHVGDLGNIVAYSTG-LAKIQIANKKLTLVGDRSIIGRTLSISEY 59

Query: 445 PDDLGLGGHELSKSTGNAGARIACGVIGLAK 537
            DDLG G H+ SK+TGN+G  IAC +IG+A+
Sbjct: 60  EDDLGRGKHDYSKTTGNSGNCIACAIIGVAR 90


>AJ439060-9|CAD27760.1|  348|Anopheles gambiae putative translation
           initiation factor protein.
          Length = 348

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 15/50 (30%), Positives = 21/50 (42%)
 Frame = -1

Query: 546 NLNLG*SDDTAGNTGSSIACRLAQFVTSKSEIIRIRMDYQSASNNAVGSN 397
           NL L  +DD  G   S +A         K E I   ++   + N A+G N
Sbjct: 94  NLKLA-ADDVKGQVESLLANETVTVDGMKQEAIEYMLEKDISDNRAIGDN 142


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 11/38 (28%), Positives = 17/38 (44%)
 Frame = -3

Query: 358 HHHHWKLQYFLGLQCDEYPNQVHHAPALVG*SELQQRC 245
           H HH   Q+        + N  HH P+L+  S  ++ C
Sbjct: 647 HQHHQAHQHQGQHHAQHHSNGTHHGPSLM--SSARESC 682


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -3

Query: 424 CVQQCCWVQLTRSE 383
           CV  CCWV L   E
Sbjct: 786 CVWDCCWVWLKFQE 799


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 698,912
Number of Sequences: 2352
Number of extensions: 15155
Number of successful extensions: 83
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 80
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)