Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_C15
         (608 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    27   0.19 
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     24   1.3  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   4.1  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    22   5.4  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     22   5.4  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   7.1  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   7.1  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   7.1  
U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.              21   9.4  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   9.4  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   9.4  

>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 26.6 bits (56), Expect = 0.19
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = -2

Query: 370 NDSSIFYEPSGQYYEPFAPN 311
           N S IFY  S QYY  FA N
Sbjct: 198 NSSEIFYTTSQQYYGHFAGN 217


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -2

Query: 406 AANHAPVFIRLGNDSSIFYEPS 341
           A N  PV +   N  SIF EPS
Sbjct: 2   AGNSVPVLLVTANVGSIFEEPS 23


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +1

Query: 460 YHNIPRGVHQLPR*RSCITYDCRSEVSG 543
           Y NI   +   PR R CI +    EV+G
Sbjct: 329 YDNIVLKLLTKPRARGCIIFGSDQEVAG 356


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 517 YDCRSEVSGSIPG 555
           Y+C    +GSIPG
Sbjct: 62  YECEGRSAGSIPG 74


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 517 YDCRSEVSGSIPG 555
           Y+C    +GSIPG
Sbjct: 62  YECEGRSAGSIPG 74


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +2

Query: 275 FQSFEHVMRLRQIWRKGLVVLTARFIKNRAVISQAYK 385
           F+   H    R +    +  + +R ++ RAV++QAYK
Sbjct: 97  FRQDVHSAAYRCVASNSVGRVLSRDVQVRAVVAQAYK 133


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +2

Query: 275 FQSFEHVMRLRQIWRKGLVVLTARFIKNRAVISQAYK 385
           F+   H    R +    +  + +R ++ RAV++QAYK
Sbjct: 97  FRQDVHSAAYRCVASNSVGRVLSRDVQVRAVVAQAYK 133


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 577 NPISLDPTRGSNPRPQNGS 521
           +P    P RGS+P  Q+G+
Sbjct: 322 HPSQYHPHRGSSPHHQHGN 340


>U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.
          Length = 182

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +1

Query: 61  DLYLCNLFVNYLTN*SILSR 120
           +LY  +LFV Y+TN  I S+
Sbjct: 135 ELYEESLFVPYITNFIIYSK 154


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +2

Query: 569 YWVFSTQYH 595
           YW+ S+QYH
Sbjct: 243 YWMSSSQYH 251


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +2

Query: 569 YWVFSTQYH 595
           YW+ S+QYH
Sbjct: 243 YWMSSSQYH 251


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,794
Number of Sequences: 438
Number of extensions: 3389
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17971191
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)