Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_C14
         (666 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.              26   0.28 
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    24   1.1  
DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.              24   1.5  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    24   1.5  

>DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.
          Length = 150

 Score = 26.2 bits (55), Expect = 0.28
 Identities = 9/18 (50%), Positives = 15/18 (83%)
 Frame = -3

Query: 472 NKERNELVEKEENFKNYG 419
           ++ R +L+ +EENF+NYG
Sbjct: 52  SEARIKLINEEENFRNYG 69


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -3

Query: 481 LVINKERNELVEKEENFKNYGG 416
           L I+  + ELV ++   KNYGG
Sbjct: 251 LYISWHQKELVRRDSRRKNYGG 272


>DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.
          Length = 120

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -1

Query: 633 KRKQGYEEEWVFCPNDNEEENPLRNY 556
           K K+    E VFC N+ EEE   R +
Sbjct: 31  KNKKPLPTECVFCRNNGEEEAYYRKH 56


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +3

Query: 591 LDRTPILPHTPVSSSPVPR 647
           + R PILP  PV   PVP+
Sbjct: 782 IPRIPILPMIPVYCVPVPQ 800


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,066
Number of Sequences: 438
Number of extensions: 3092
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20099475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)