Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_C08
(541 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024756-6|AAK29881.1| 105|Caenorhabditis elegans Glutaredoxin ... 88 4e-18
U40945-3|AAA81721.2| 146|Caenorhabditis elegans Hypothetical pr... 71 7e-13
AC006831-2|AAF39994.2| 119|Caenorhabditis elegans Hypothetical ... 59 2e-09
AC006831-3|ABD63200.1| 96|Caenorhabditis elegans Hypothetical ... 48 4e-06
Z82082-4|CAE45093.1| 210|Caenorhabditis elegans Hypothetical pr... 42 3e-04
U58751-6|AAZ82854.1| 131|Caenorhabditis elegans Hypothetical pr... 38 0.003
Z98866-2|CAB11547.1| 142|Caenorhabditis elegans Hypothetical pr... 32 0.30
AF125951-5|AAL27238.1| 345|Caenorhabditis elegans Hypothetical ... 31 0.40
AF125951-4|AAT68898.1| 342|Caenorhabditis elegans Hypothetical ... 31 0.70
AC006682-1|AAF39956.3| 1853|Caenorhabditis elegans Hypothetical ... 30 0.93
U61947-1|AAB03136.3| 667|Caenorhabditis elegans Thioredoxin red... 29 2.1
AF148217-1|AAD41826.1| 667|Caenorhabditis elegans thioredoxin r... 29 2.1
Z92972-1|CAB07483.1| 283|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z82080-7|CAJ85754.1| 127|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z82080-1|CAB54322.3| 320|Caenorhabditis elegans Hypothetical pr... 27 8.6
>AC024756-6|AAK29881.1| 105|Caenorhabditis elegans Glutaredoxin
protein 10 protein.
Length = 105
Score = 87.8 bits (208), Expect = 4e-18
Identities = 45/95 (47%), Positives = 58/95 (61%), Gaps = 3/95 (3%)
Frame = +1
Query: 7 FIKEAILKDKVVVFSKSYCPYCKLAKDVFQKVK---QPIKVIELDERDDGNIIQDNLSQI 177
F+ + KVVVFSKSYCPYC A+ + V ++ IE+DER D N IQD L +
Sbjct: 5 FVDGLLQSSKVVVFSKSYCPYCHKARAALESVNVKPDALQWIEIDERKDCNEIQDYLGSL 64
Query: 178 TGFRTVPQVFINGNCVGGGSDVKDLYQSGKLEPML 282
TG R+VP+VFING GGG D ++GKL +L
Sbjct: 65 TGARSVPRVFINGKFFGGGDDTAAGAKNGKLAALL 99
>U40945-3|AAA81721.2| 146|Caenorhabditis elegans Hypothetical
protein F10D7.3 protein.
Length = 146
Score = 70.5 bits (165), Expect = 7e-13
Identities = 32/88 (36%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Frame = +1
Query: 22 ILKDKVVVFSKSYCPYCKLAKDVFQKVK-QPIKVIELDERDDGNIIQDNLSQITGFRTVP 198
++ KV+V+SK+YCP+ K K + + +K++ELD + +Q+ L + +G TVP
Sbjct: 41 VMTHKVMVYSKTYCPWSKRLKAILANYEIDDMKIVELDRSNQTEEMQEILKKYSGRTTVP 100
Query: 199 QVFINGNCVGGGSDVKDLYQSGKLEPML 282
Q+FI+G VGG + K + + G+L P+L
Sbjct: 101 QLFISGKFVGGHDETKAIEEKGELRPLL 128
>AC006831-2|AAF39994.2| 119|Caenorhabditis elegans Hypothetical
protein ZK121.1a protein.
Length = 119
Score = 58.8 bits (136), Expect = 2e-09
Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Frame = +1
Query: 10 IKEAILKDKVVVFSKSYCPYCKLAKDVFQKVKQPIKVIELD-----ERDDGNIIQDNLSQ 174
++E + KD VV+++K+ C +C AKD+F V+ K + LD + DD I + L
Sbjct: 13 VQEQVKKDPVVMYTKTSCTFCNRAKDLFSDVRVAYKEVNLDTLKASQPDDYLGIVNGLVY 72
Query: 175 ITGFRTVPQVFINGNCVGGGSDVKDLYQSGKL 270
T +VPQ+F+ G +GG +++ L SG L
Sbjct: 73 TTRQTSVPQIFVCGRFIGGYTELDALRNSGHL 104
>AC006831-3|ABD63200.1| 96|Caenorhabditis elegans Hypothetical
protein ZK121.1b protein.
Length = 96
Score = 48.0 bits (109), Expect = 4e-06
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Frame = +1
Query: 43 VFSKSYCPYCKLAKDVFQKVKQPIKVIELD-----ERDDGNIIQDNLSQITGFRTVPQVF 207
+++K+ C +C AKD+F V+ K + LD + DD I + L T +VPQ+F
Sbjct: 1 MYTKTSCTFCNRAKDLFSDVRVAYKEVNLDTLKASQPDDYLGIVNGLVYTTRQTSVPQIF 60
Query: 208 INGNCVGGGSDVKDLYQSGKL 270
+ G +GG +++ L SG L
Sbjct: 61 VCGRFIGGYTELDALRNSGHL 81
>Z82082-4|CAE45093.1| 210|Caenorhabditis elegans Hypothetical
protein ZC334.7 protein.
Length = 210
Score = 41.9 bits (94), Expect = 3e-04
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Frame = +1
Query: 7 FIKEAILKDKVVVFSKSYCPYCKLAKDVFQKVKQ--PIKVIEL-DERDDGNIIQDNLSQI 177
+I + V++++ C C+ AK + P +EL + D +Q +L ++
Sbjct: 108 YINRQARRYPVMMYTLIQCVPCQRAKHLLATTYGDIPSHFLELVGDEDWQRQLQVDLLKV 167
Query: 178 TGFRTVPQVFINGNCVGGGSDVKDLYQSGKLEPML 282
T T P VF+ GN +GG SD+ +++ SG+L L
Sbjct: 168 TRQATFPYVFVCGNFIGGSSDLFNMHHSGQLRQAL 202
>U58751-6|AAZ82854.1| 131|Caenorhabditis elegans Hypothetical
protein C07G1.8 protein.
Length = 131
Score = 38.3 bits (85), Expect = 0.003
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Frame = +1
Query: 10 IKEAILKDKVVVFSKSYCPYCKLAK-----DVFQKVKQPIKVIELDERDDGNIIQDNLSQ 174
I E + + VV+++K C YC AK D ++ + + + IQ L
Sbjct: 20 IVEEVKEHAVVLYTKDGCGYCVKAKNELYEDGIHYTEKNLNTVSKVIPNPQEYIQ-GLMD 78
Query: 175 ITGFRTVPQVFINGNCVGGGSDVKDL 252
+T RTVPQ+FI G VGG +++ L
Sbjct: 79 LTRQRTVPQIFICGKFVGGYTELNAL 104
>Z98866-2|CAB11547.1| 142|Caenorhabditis elegans Hypothetical
protein Y49E10.2 protein.
Length = 142
Score = 31.9 bits (69), Expect = 0.30
Identities = 22/90 (24%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Frame = +1
Query: 22 ILKDKVVVFSKSYC--PYCKLAKDVFQKVK-QPIKVIELDERDDGNIIQDNLSQITGFRT 192
+ KD VVVF K P C +++V + +K + + D + ++ + + + T
Sbjct: 42 VKKDDVVVFMKGTQQEPACGFSRNVKLVLDFHNVKFQDYNVLTDQEL-REGVKIFSEWPT 100
Query: 193 VPQVFINGNCVGGGSDVKDLYQSGKLEPML 282
+PQV++ G VGG + +++ G++ L
Sbjct: 101 IPQVYVKGEFVGGCDILISMHKDGEISDFL 130
>AF125951-5|AAL27238.1| 345|Caenorhabditis elegans Hypothetical
protein D2063.3a protein.
Length = 345
Score = 31.5 bits (68), Expect = 0.40
Identities = 17/85 (20%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Frame = +1
Query: 10 IKEAILKDKVVVFSKS-----YCPYCKLAKDVFQKVKQPIKVIELDERDDGNIIQDNLSQ 174
+K+ + ++++F K C + + D+ K + ++ E ++ ++ L +
Sbjct: 247 LKKLVSSQRLMLFMKGDRETPKCGFSRTIVDLLNKARADYHTFDILEDEE---VRQGLKK 303
Query: 175 ITGFRTVPQVFINGNCVGGGSDVKD 249
+ + T PQ++++G VGG VK+
Sbjct: 304 FSNWPTYPQLYLDGELVGGLDVVKE 328
Score = 30.7 bits (66), Expect = 0.70
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Frame = +1
Query: 34 KVVVFSKS--YCPYCKLAKDVFQKVKQ-PIKVIELDERDDGNIIQDNLSQITGFRTVPQV 204
KV+VF K P C ++ + + + IK D D ++ L + + + T PQ+
Sbjct: 147 KVMVFMKGDPSAPRCGFSRTIVELLNSHKIKFGSFDIFSD-EAVRQGLKEYSNWPTYPQL 205
Query: 205 FINGNCVGGGSDVKD 249
+ +G +GG VK+
Sbjct: 206 YFDGELIGGLDVVKE 220
>AF125951-4|AAT68898.1| 342|Caenorhabditis elegans Hypothetical
protein D2063.3b protein.
Length = 342
Score = 30.7 bits (66), Expect = 0.70
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Frame = +1
Query: 34 KVVVFSKS--YCPYCKLAKDVFQKVKQ-PIKVIELDERDDGNIIQDNLSQITGFRTVPQV 204
KV+VF K P C ++ + + + IK D D ++ L + + + T PQ+
Sbjct: 147 KVMVFMKGDPSAPRCGFSRTIVELLNSHKIKFGSFDIFSD-EAVRQGLKEYSNWPTYPQL 205
Query: 205 FINGNCVGGGSDVKD 249
+ +G +GG VK+
Sbjct: 206 YFDGELIGGLDVVKE 220
>AC006682-1|AAF39956.3| 1853|Caenorhabditis elegans Hypothetical
protein R193.2 protein.
Length = 1853
Score = 30.3 bits (65), Expect = 0.93
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -3
Query: 233 PPPTQLPLMNT*GTVLKPVICDRLS*IMFP-SSRSSNSMTLI 111
PPPT+LPL+ T GT P + ++ + P +S N + LI
Sbjct: 425 PPPTRLPLITTIGTTTNPAVRTTVNPLFPPIASCKQNVLFLI 466
>U61947-1|AAB03136.3| 667|Caenorhabditis elegans Thioredoxin
reductase protein 1 protein.
Length = 667
Score = 29.1 bits (62), Expect = 2.1
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +1
Query: 103 KQPIKVIELDERDDGNIIQDNLSQITGFRTVPQVFINGNCVGGGSDVKDLYQ 258
++P+++ E+ + Q + +T + P ++I GN VGG ++K L Q
Sbjct: 110 EKPLEIPEIKKLQVSRASQKVIQYLTLHTSWPLMYIKGNAVGGLKELKALKQ 161
>AF148217-1|AAD41826.1| 667|Caenorhabditis elegans thioredoxin
reductase protein.
Length = 667
Score = 29.1 bits (62), Expect = 2.1
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +1
Query: 103 KQPIKVIELDERDDGNIIQDNLSQITGFRTVPQVFINGNCVGGGSDVKDLYQ 258
++P+++ E+ + Q + +T + P ++I GN VGG ++K L Q
Sbjct: 110 EKPLEIPEIKKLQVSRASQKVIQYLTLHTSWPLMYIKGNAVGGLKELKALKQ 161
>Z92972-1|CAB07483.1| 283|Caenorhabditis elegans Hypothetical
protein T19C9.1 protein.
Length = 283
Score = 27.9 bits (59), Expect = 4.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 349 STIIICFLFQNAIEVLNFYILCNAVV 426
ST+I FLF + LNFY+L + V
Sbjct: 7 STVIFSFLFTQTVFYLNFYLLYSIFV 32
>Z82080-7|CAJ85754.1| 127|Caenorhabditis elegans Hypothetical
protein W09G3.1b protein.
Length = 127
Score = 27.1 bits (57), Expect = 8.6
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Frame = +1
Query: 103 KQPIKVIE---LDERDDG-NIIQDNLSQITGFRTVPQVFINGN 219
++PI+ IE +++ D N+I +N Q+T R P F+ GN
Sbjct: 20 REPIRQIERIHVEKAGDSVNVISENCGQLTIARRSPACFLAGN 62
>Z82080-1|CAB54322.3| 320|Caenorhabditis elegans Hypothetical
protein W09G3.1a protein.
Length = 320
Score = 27.1 bits (57), Expect = 8.6
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Frame = +1
Query: 103 KQPIKVIE---LDERDDG-NIIQDNLSQITGFRTVPQVFINGN 219
++PI+ IE +++ D N+I +N Q+T R P F+ GN
Sbjct: 20 REPIRQIERIHVEKAGDSVNVISENCGQLTIARRSPACFLAGN 62
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,425,417
Number of Sequences: 27780
Number of extensions: 165888
Number of successful extensions: 428
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 419
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 424
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1081316076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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