Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_C08
         (541 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    23   2.0  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   6.1  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   6.1  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    21   8.1  

>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 243 QRFVPIW*IGANVDW 287
           Q F+ IW +G+ +DW
Sbjct: 674 QCFINIWLLGSRLDW 688


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 241 VKDLYQSGKLEPML 282
           VKD+Y+  K EPM+
Sbjct: 60  VKDIYEKYKNEPMV 73


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +1

Query: 160  DNLSQITGFRTVPQVFING 216
            D +  + G  + P+VF+NG
Sbjct: 1515 DKIKFVPGTTSQPEVFVNG 1533


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +1

Query: 415 NAVVVYFNTKITMSNIY 465
           +AV +YF  ++ +SN+Y
Sbjct: 694 SAVDMYFRRQVELSNMY 710


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,330
Number of Sequences: 438
Number of extensions: 2159
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15336375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)