Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_C06
(717 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L21758-1|AAA16827.1| 264|Caenorhabditis elegans osteonectin pro... 161 5e-40
AF036692-3|AAB88325.1| 264|Caenorhabditis elegans Osteonectin (... 161 5e-40
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 43 2e-04
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 43 2e-04
AF106582-7|ABD94096.1| 806|Caenorhabditis elegans Hypothetical ... 33 0.27
AF106582-6|ABD94095.1| 834|Caenorhabditis elegans Hypothetical ... 33 0.27
AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical ... 31 0.62
AC006620-1|AAF39780.1| 754|Caenorhabditis elegans Hypothetical ... 31 0.62
Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical pr... 31 1.1
U55364-2|AAN84822.2| 317|Caenorhabditis elegans Hypothetical pr... 31 1.1
AF016687-11|ABL01528.1| 646|Caenorhabditis elegans Hypothetical... 30 1.4
U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical p... 30 1.9
AF101305-3|AAF98595.1| 341|Caenorhabditis elegans Serpentine re... 26 2.4
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 29 2.5
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 29 2.5
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 29 2.5
AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical ... 29 3.3
U88315-17|AAK68238.1| 132|Caenorhabditis elegans Hypothetical p... 29 4.4
U88315-16|AAK68237.1| 414|Caenorhabditis elegans Hypothetical p... 29 4.4
AC084158-16|AAK68571.2| 347|Caenorhabditis elegans Hypothetical... 29 4.4
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 28 5.8
U39850-1|AAA81055.3| 618|Caenorhabditis elegans Hypothetical pr... 28 5.8
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 28 5.8
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 28 5.8
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 28 5.8
Z92831-4|CAJ58497.1| 447|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 28 7.7
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 28 7.7
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z50874-11|CAA90766.1| 259|Caenorhabditis elegans Hypothetical p... 28 7.7
>L21758-1|AAA16827.1| 264|Caenorhabditis elegans osteonectin
protein.
Length = 264
Score = 161 bits (391), Expect = 5e-40
Identities = 75/183 (40%), Positives = 109/183 (59%), Gaps = 4/183 (2%)
Frame = +2
Query: 164 DPCMKVHCSAGRVCEINEHGEAICNCIKECP-YETDSRRKVCTNFNETWSSDCEVYRQRC 340
+PC C G+ C + + GE C CI +CP + D KVC N N+T++S C++YR+RC
Sbjct: 51 NPCEDHQCGWGKECVVGKKGEPTCECISKCPELDGDPMDKVCANNNQTFTSLCDLYRERC 110
Query: 341 LCLDHSELCRRAQYHHVQIEYYGTCREMPECSENEMSDFPRRMRDWLFNIMRDLAERREL 520
LC S+ C +A V +EY G C+++ EC+E M+ FP RM DWLF +M++L +RREL
Sbjct: 111 LCKRKSKECSKAFNAKVHLEYLGECKKLDECTEEHMAQFPERMADWLFQVMKELKKRREL 170
Query: 521 TPHYLRMER---EAESNLTRRWTNAAIWKWCDLDAHDNDGFVSRHEFVPDSGRRDVLEHC 691
H L E EAE++ ++ IWK+C+LD +D VS HE +P + +E C
Sbjct: 171 --HKLEWEELLSEAENDDEKKHVYPVIWKFCELDTKPHDKSVSHHELIPITAPVIPMESC 228
Query: 692 IAP 700
I P
Sbjct: 229 IKP 231
>AF036692-3|AAB88325.1| 264|Caenorhabditis elegans Osteonectin
(sparc) related protein1 protein.
Length = 264
Score = 161 bits (391), Expect = 5e-40
Identities = 75/183 (40%), Positives = 109/183 (59%), Gaps = 4/183 (2%)
Frame = +2
Query: 164 DPCMKVHCSAGRVCEINEHGEAICNCIKECP-YETDSRRKVCTNFNETWSSDCEVYRQRC 340
+PC C G+ C + + GE C CI +CP + D KVC N N+T++S C++YR+RC
Sbjct: 51 NPCEDHQCGWGKECVVGKKGEPTCECISKCPELDGDPMDKVCANNNQTFTSLCDLYRERC 110
Query: 341 LCLDHSELCRRAQYHHVQIEYYGTCREMPECSENEMSDFPRRMRDWLFNIMRDLAERREL 520
LC S+ C +A V +EY G C+++ EC+E M+ FP RM DWLF +M++L +RREL
Sbjct: 111 LCKRKSKECSKAFNAKVHLEYLGECKKLDECTEEHMAQFPERMADWLFQVMKELKKRREL 170
Query: 521 TPHYLRMER---EAESNLTRRWTNAAIWKWCDLDAHDNDGFVSRHEFVPDSGRRDVLEHC 691
H L E EAE++ ++ IWK+C+LD +D VS HE +P + +E C
Sbjct: 171 --HKLEWEELLSEAENDDEKKHVYPVIWKFCELDTKPHDKSVSHHELIPITAPVIPMESC 228
Query: 692 IAP 700
I P
Sbjct: 229 IKP 231
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +2
Query: 176 KVHCSAGRVCEINEHGEAICNCIKECP-YETDSRRKVCTNFNETWSSDCEVYRQRC 340
K C C + E+ +A C C +CP YE + ++VC T+SS+C + + C
Sbjct: 515 KEKCDFYSACVVGENEKAECKCPDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSAC 570
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +2
Query: 167 PCMKVHCSAGRVCEINEHGEAICNCIKECPYETDSRRKVCTNFNETWSSDCEVYRQRC 340
PC K+ C C + A C C C D R VC ET+ ++CE+ ++ C
Sbjct: 369 PCEKMECGFWGSCVVKPDRTAECECPNRCE---DVMRPVCATNGETFDNECEMKKKSC 423
Score = 33.5 bits (73), Expect = 0.15
Identities = 18/82 (21%), Positives = 38/82 (46%), Gaps = 5/82 (6%)
Frame = +2
Query: 185 CSAGRVCEINEHGEAICNCIKECPYETDSRRKVCTNFNETWSSDCEVYRQRCLC-----L 349
C +VC + + G+ C CP TD ++VC + +T+S++C + C+ +
Sbjct: 448 CKKPQVCVVVD-GKPKC----VCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFV 502
Query: 350 DHSELCRRAQYHHVQIEYYGTC 415
++ C + + ++Y C
Sbjct: 503 KYNSACEACKLKKEKCDFYSAC 524
Score = 32.7 bits (71), Expect = 0.27
Identities = 15/59 (25%), Positives = 26/59 (44%)
Frame = +2
Query: 164 DPCMKVHCSAGRVCEINEHGEAICNCIKECPYETDSRRKVCTNFNETWSSDCEVYRQRC 340
DPC C G+ C++ C C ++C T + VC +T+ ++C + C
Sbjct: 294 DPCHGHKCPNGQTCQLGVDRRPECKCSEQC---TMNSAHVCGTDGKTYLNECFLKLAAC 349
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/59 (23%), Positives = 20/59 (33%)
Frame = +2
Query: 164 DPCMKVHCSAGRVCEINEHGEAICNCIKECPYETDSRRKVCTNFNETWSSDCEVYRQRC 340
D C+ V C G C +C C CP ++C + S C + C
Sbjct: 585 DECLHVQCRYGEECR-----SGVCVCSYNCPANPPLSARICGENGVLYPSLCHLQLASC 638
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +2
Query: 176 KVHCSAGRVCEINEHGEAICNCIKECP-YETDSRRKVCTNFNETWSSDCEVYRQRC 340
K C C + E+ +A C C +CP YE + ++VC T+SS+C + + C
Sbjct: 523 KEKCDFYSACVVGENEKAECKCPDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSAC 578
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +2
Query: 167 PCMKVHCSAGRVCEINEHGEAICNCIKECPYETDSRRKVCTNFNETWSSDCEVYRQRC 340
PC K+ C C + A C C C D R VC ET+ ++CE+ ++ C
Sbjct: 377 PCEKMECGFWGSCVVKPDRTAECECPNRCE---DVMRPVCATNGETFDNECEMKKKSC 431
Score = 33.5 bits (73), Expect = 0.15
Identities = 18/82 (21%), Positives = 38/82 (46%), Gaps = 5/82 (6%)
Frame = +2
Query: 185 CSAGRVCEINEHGEAICNCIKECPYETDSRRKVCTNFNETWSSDCEVYRQRCLC-----L 349
C +VC + + G+ C CP TD ++VC + +T+S++C + C+ +
Sbjct: 456 CKKPQVCVVVD-GKPKC----VCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFV 510
Query: 350 DHSELCRRAQYHHVQIEYYGTC 415
++ C + + ++Y C
Sbjct: 511 KYNSACEACKLKKEKCDFYSAC 532
Score = 32.7 bits (71), Expect = 0.27
Identities = 15/59 (25%), Positives = 26/59 (44%)
Frame = +2
Query: 164 DPCMKVHCSAGRVCEINEHGEAICNCIKECPYETDSRRKVCTNFNETWSSDCEVYRQRC 340
DPC C G+ C++ C C ++C T + VC +T+ ++C + C
Sbjct: 302 DPCHGHKCPNGQTCQLGVDRRPECKCSEQC---TMNSAHVCGTDGKTYLNECFLKLAAC 357
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/59 (23%), Positives = 20/59 (33%)
Frame = +2
Query: 164 DPCMKVHCSAGRVCEINEHGEAICNCIKECPYETDSRRKVCTNFNETWSSDCEVYRQRC 340
D C+ V C G C +C C CP ++C + S C + C
Sbjct: 593 DECLHVQCRYGEECR-----SGVCVCSYNCPANPPLSARICGENGVLYPSLCHLQLASC 646
>AF106582-7|ABD94096.1| 806|Caenorhabditis elegans Hypothetical
protein W05F2.4b protein.
Length = 806
Score = 32.7 bits (71), Expect = 0.27
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +3
Query: 183 TAAPAVSVRSTSTGKLSATASRSVHTKPTLGARCAQTS 296
T APA + S S K A++S ++ KPT+ + ++TS
Sbjct: 96 TTAPAAKIASASDSKKPASSSSTISVKPTVRQKTSETS 133
>AF106582-6|ABD94095.1| 834|Caenorhabditis elegans Hypothetical
protein W05F2.4a protein.
Length = 834
Score = 32.7 bits (71), Expect = 0.27
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +3
Query: 183 TAAPAVSVRSTSTGKLSATASRSVHTKPTLGARCAQTS 296
T APA + S S K A++S ++ KPT+ + ++TS
Sbjct: 124 TTAPAAKIASASDSKKPASSSSTISVKPTVRQKTSETS 161
>AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical
protein Y79H2A.3a protein.
Length = 2129
Score = 31.5 bits (68), Expect = 0.62
Identities = 28/89 (31%), Positives = 37/89 (41%), Gaps = 4/89 (4%)
Frame = -1
Query: 717 IALVEDGAMQCSRTS----RRPESGTNSCRDTNPSLSCASRSHHFQMAALVQRRVRLDSA 550
I L+ D M +T R+ N R + + SR H + +RR R +
Sbjct: 1485 IDLLNDDDMDSDKTESPLKRKDPRSKNRSRSRDRARRSRSREHKRARSRSAERRRRSRTR 1544
Query: 549 SRSMRR*WGVSSRRSARSRIMLNSQSRMR 463
SRS R SRR RSR S+SR R
Sbjct: 1545 SRSRSR-ERYRSRRDRRSRTKSRSRSRSR 1572
>AC006620-1|AAF39780.1| 754|Caenorhabditis elegans Hypothetical
protein C51G7.3 protein.
Length = 754
Score = 31.5 bits (68), Expect = 0.62
Identities = 28/89 (31%), Positives = 37/89 (41%), Gaps = 4/89 (4%)
Frame = -1
Query: 717 IALVEDGAMQCSRTS----RRPESGTNSCRDTNPSLSCASRSHHFQMAALVQRRVRLDSA 550
I L+ D M +T R+ N R + + SR H + +RR R +
Sbjct: 110 IDLLNDDDMDSDKTESPLKRKDPRSKNRSRSRDRARRSRSREHKRARSRSAERRRRSRTR 169
Query: 549 SRSMRR*WGVSSRRSARSRIMLNSQSRMR 463
SRS R SRR RSR S+SR R
Sbjct: 170 SRSRSR-ERYRSRRDRRSRTKSRSRSRSR 197
>Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Frame = +2
Query: 185 CSAGRVCEINEHGEAICNCIKECPYETDSRRKVCTNFNET--WSSDCEVYRQRC---LCL 349
C G E + HG + C K CP T+ +C + ++T S+C + +C C+
Sbjct: 385 CQDGSEPEFSLHGSSYCWSNKVCPAMTECVAGLCCSISKTRKRQSECLEGQFKCGTGQCI 444
Query: 350 DHSELCRR 373
+ S C R
Sbjct: 445 EESLKCNR 452
>Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Frame = +2
Query: 185 CSAGRVCEINEHGEAICNCIKECPYETDSRRKVCTNFNET--WSSDCEVYRQRC---LCL 349
C G E + HG + C K CP T+ +C + ++T S+C + +C C+
Sbjct: 385 CQDGSEPEFSLHGSSYCWSNKVCPAMTECVAGLCCSISKTRKRQSECLEGQFKCGTGQCI 444
Query: 350 DHSELCRR 373
+ S C R
Sbjct: 445 EESLKCNR 452
>U55364-2|AAN84822.2| 317|Caenorhabditis elegans Hypothetical
protein F21C10.9 protein.
Length = 317
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +1
Query: 241 HQGVSIRNRL*AQGVHKLQRDLVIGLRGVPTALP 342
++G I + + AQ + ++++DLV+GLRGV P
Sbjct: 85 YRGKGIGSMIWAQAMSRIRKDLVLGLRGVVKMAP 118
>AF016687-11|ABL01528.1| 646|Caenorhabditis elegans Hypothetical
protein T21D12.7 protein.
Length = 646
Score = 30.3 bits (65), Expect = 1.4
Identities = 24/90 (26%), Positives = 32/90 (35%), Gaps = 6/90 (6%)
Frame = +2
Query: 191 AGRVCEINEHGEAICNCIKECPYETDSRRKVCTNFNETWSSDCE---VYRQRCLCLDHSE 361
+ R+C+ + H C Y DS K C F T E + C+ SE
Sbjct: 118 SNRICQASVHPGTPCGVPPATRYYFDSSSKTCRPFAFTGCGGNENNFKGKGECMMFCSSE 177
Query: 362 -LCRRAQYH--HVQIEYYGTCREMPECSEN 442
+C R + H I TC E C N
Sbjct: 178 IICPRGEPHADRYSINNIATCMEDKHCPRN 207
>U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical
protein B0507.1 protein.
Length = 615
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/46 (26%), Positives = 15/46 (32%)
Frame = +2
Query: 185 CSAGRVCEINEHGEAICNCIKECPYETDSRRKVCTNFNETWSSDCE 322
CS G C G +C C + Y S K C C+
Sbjct: 215 CSGGAACICGARGNCMCECATDFGYTLASDGKTCQRVRRRLKEKCK 260
>AF101305-3|AAF98595.1| 341|Caenorhabditis elegans Serpentine
receptor, class ab (class a-like) protein 1 protein.
Length = 341
Score = 25.8 bits (54), Expect(2) = 2.4
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +2
Query: 455 FPRRMRDWLFNIMRDLAERRELTPHYLRMEREAESNLTRRWTNAAIWKWC 604
FP R R L + + A E+TP L ER + R + N +KWC
Sbjct: 94 FPSRSRCELRKLYKISAFVVEVTPFVLTAERFVATFRARHYENR--YKWC 141
Score = 22.2 bits (45), Expect(2) = 2.4
Identities = 7/19 (36%), Positives = 10/19 (52%)
Frame = +2
Query: 290 NFNETWSSDCEVYRQRCLC 346
N+ W S CE++ R C
Sbjct: 82 NYVGPWMSGCEIFPSRSRC 100
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
Frame = +2
Query: 170 CMKVHCSAGRVCEIN-EHGEAICNCIKECPYETDSRRKVCTNFNE-TWSSDCEVYR--QR 337
C C+A + + G+ +CN I ECP + + C E T+S D +
Sbjct: 1224 CEPCGCNAAGTDPLQCKDGQCLCNEIGECPCKKNVHGTKCDQCGEGTFSLDSSNLKGCTE 1283
Query: 338 CLCLDHSELCRRA 376
C C + + C ++
Sbjct: 1284 CFCFNRTSNCEQS 1296
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
Frame = +2
Query: 170 CMKVHCSAGRVCEIN-EHGEAICNCIKECPYETDSRRKVCTNFNE-TWSSDCEVYR--QR 337
C C+A + + G+ +CN I ECP + + C E T+S D +
Sbjct: 1224 CEPCGCNAAGTDPLQCKDGQCLCNEIGECPCKKNVHGTKCDQCGEGTFSLDSSNLKGCTE 1283
Query: 338 CLCLDHSELCRRA 376
C C + + C ++
Sbjct: 1284 CFCFNRTSNCEQS 1296
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
Frame = +2
Query: 170 CMKVHCSAGRVCEIN-EHGEAICNCIKECPYETDSRRKVCTNFNE-TWSSDCEVYR--QR 337
C C+A + + G+ +CN I ECP + + C E T+S D +
Sbjct: 1224 CEPCGCNAAGTDPLQCKDGQCLCNEIGECPCKKNVHGTKCDQCGEGTFSLDSSNLKGCTE 1283
Query: 338 CLCLDHSELCRRA 376
C C + + C ++
Sbjct: 1284 CFCFNRTSNCEQS 1296
>AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical
protein E01A2.4 protein.
Length = 504
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = -2
Query: 134 RVTHSGSRRHELSQPPGIVSRPGSPP----CRSRGAPTRRCPRGEAPP 3
R + S RR +S+ P V R SPP RSR P RR R +PP
Sbjct: 112 RRSPSPPRRRRISRSP--VRRSRSPPRRQVSRSRSPPPRRQQRSRSPP 157
>U88315-17|AAK68238.1| 132|Caenorhabditis elegans Hypothetical
protein C37H5.13b protein.
Length = 132
Score = 28.7 bits (61), Expect = 4.4
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = -1
Query: 333 CRYTSQSDDQVSLKFVHTLRLESVSYGHSLMQLQIASPCSLISQTRPALQCTFMHGSSRL 154
CR + +F+ RLES++ G+ + +SP S + T P +Q F H +
Sbjct: 5 CRTARHFVKSTARRFIEQKRLESLTTGNGM-----SSPSSTHANTAPVVQSHFAHRPQHV 59
Query: 153 ISLSGASRD 127
S S +
Sbjct: 60 SSAPSRSME 68
>U88315-16|AAK68237.1| 414|Caenorhabditis elegans Hypothetical
protein C37H5.13a protein.
Length = 414
Score = 28.7 bits (61), Expect = 4.4
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = -1
Query: 333 CRYTSQSDDQVSLKFVHTLRLESVSYGHSLMQLQIASPCSLISQTRPALQCTFMHGSSRL 154
CR + +F+ RLES++ G+ + +SP S + T P +Q F H +
Sbjct: 5 CRTARHFVKSTARRFIEQKRLESLTTGNGM-----SSPSSTHANTAPVVQSHFAHRPQHV 59
Query: 153 ISLSGASRD 127
S S +
Sbjct: 60 SSAPSRSME 68
>AC084158-16|AAK68571.2| 347|Caenorhabditis elegans Hypothetical
protein Y69A2AR.26 protein.
Length = 347
Score = 28.7 bits (61), Expect = 4.4
Identities = 22/103 (21%), Positives = 41/103 (39%), Gaps = 2/103 (1%)
Frame = +2
Query: 317 CEVYRQRCLCLDHSELCRRAQYHHVQIEYYGTCR--EMPECSENEMSDFPRRMRDWLFNI 490
C V+ +R C + C R + + I TCR + +C M+ + RD +
Sbjct: 41 CLVFFRRMTCGEKKWYCLRNRNCEINIATRNTCRACRLQKCLNVGMNPNAIQRRDEIGPR 100
Query: 491 MRDLAERRELTPHYLRMEREAESNLTRRWTNAAIWKWCDLDAH 619
+++ R E ++N +++ NAA C + H
Sbjct: 101 KPKVSKHRLTCAQNFSFSGETQNNFSQKQYNAATSSECAMCLH 143
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/35 (45%), Positives = 16/35 (45%), Gaps = 3/35 (8%)
Frame = -2
Query: 98 SQPPGIVSRPGSP---PCRSRGAPTRRCPRGEAPP 3
S PPG PG P P G PTRR P PP
Sbjct: 241 SDPPGPPGPPGPPTRRPPGPPGPPTRRPPGPPGPP 275
>U39850-1|AAA81055.3| 618|Caenorhabditis elegans Hypothetical
protein F52C9.5 protein.
Length = 618
Score = 28.3 bits (60), Expect = 5.8
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Frame = +2
Query: 248 ECPYETDSRRKVCTNFNETWSSDCEVYRQRCLC-LDHSEL---CRRA----QYHHVQIEY 403
EC +RRK+C NFN+ DC + C+ +D +++ +RA H QIE
Sbjct: 485 ECQDGKQTRRKICANFNQI--EDCAEEVRDCVDEIDSTDMRMSIKRAGELENNDHEQIED 542
Query: 404 YGT-CREMPECSENEMSDFPRRMR 472
T E P ++ E+++ +++R
Sbjct: 543 NNTDASEDPVPTKEEIAEVKQKIR 566
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -2
Query: 98 SQPPGIVSRPGSPPCRSRGAPTRRCPRGEAP 6
S PP P PP + R AP R P G P
Sbjct: 320 SPPPAGTGSPPPPPRQKRQAPERSPPTGSPP 350
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -2
Query: 98 SQPPGIVSRPGSPPCRSRGAPTRRCPRGEAP 6
S PP P PP + R AP R P G P
Sbjct: 341 SPPPAGTGSPPPPPRQKRQAPERSPPTGSPP 371
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -2
Query: 98 SQPPGIVSRPGSPPCRSRGAPTRRCPRGEAP 6
S PP P PP + R AP R P G P
Sbjct: 326 SPPPAGTGSPPPPPRQKRQAPERSPPTGSPP 356
>Z92831-4|CAJ58497.1| 447|Caenorhabditis elegans Hypothetical
protein F22G12.7 protein.
Length = 447
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = +2
Query: 32 ESEHLENGMAESLDERRFQEAERARVSEILNESRDAPDNEINLDDPCMKVHCS 190
E EHLEN + +S + R ++E A +SE+ + + + + +++ CS
Sbjct: 48 EKEHLENSIKKSKNMR--NQSEEAYLSELKRQGLEKHAANVKHQETMLRMSCS 98
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 183 TAAPAVSVRSTSTGKLSATASRSVHTKPTLGARCAQTST 299
T A A + +TS G S+ ASR +T+P + +++ T
Sbjct: 350 TGASASATSATSGGSASSDASRDKYTRPPIVLEASRSQT 388
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 183 TAAPAVSVRSTSTGKLSATASRSVHTKPTLGARCAQTST 299
T A A + +TS G S+ ASR +T+P + +++ T
Sbjct: 350 TGASASATSATSGGSASSDASRDKYTRPPIVLEASRSQT 388
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 183 TAAPAVSVRSTSTGKLSATASRSVHTKPTLGARCAQTST 299
T A A + +TS G S+ ASR +T+P + +++ T
Sbjct: 350 TGASASATSATSGGSASSDASRDKYTRPPIVLEASRSQT 388
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 183 TAAPAVSVRSTSTGKLSATASRSVHTKPTLGARCAQTST 299
T A A + +TS G S+ ASR +T+P + +++ T
Sbjct: 350 TGASASATSATSGGSASSDASRDKYTRPPIVLEASRSQT 388
>Z50874-11|CAA90766.1| 259|Caenorhabditis elegans Hypothetical
protein R10E4.5 protein.
Length = 259
Score = 27.9 bits (59), Expect = 7.7
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Frame = -1
Query: 711 LVEDGAMQCSRTSRRPESGTNSCRDTNPSLSCAS-RSHHFQMAALVQRRVRLDSASRSMR 535
LV G MQC RP+ GT CR T PS + + +S + + ++ + ++ +
Sbjct: 179 LVGFGQMQCQPV--RPKCGTCLCRFTCPSSTAKNVKSETEETSTSIEVKQEVEDEFEDEK 236
Query: 534 R*WGVSSRRSARSRIMLNSQS 472
+ R R++I + ++S
Sbjct: 237 PAKKIKKTRKTRTKIEVKTES 257
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,196,352
Number of Sequences: 27780
Number of extensions: 367770
Number of successful extensions: 1751
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1735
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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