Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_C03
         (595 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50311-12|AAA92315.1|  169|Caenorhabditis elegans Hypothetical p...    42   4e-04
Z81097-4|CAB03176.1|  100|Caenorhabditis elegans Hypothetical pr...    34   0.088
U29377-10|AAA68717.1|  140|Caenorhabditis elegans Hypothetical p...    31   0.62 
AF016450-10|AAB65990.1|  166|Caenorhabditis elegans Hypothetical...    30   1.1  
Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical pr...    29   1.9  
Z81110-2|CAB03259.1|  802|Caenorhabditis elegans Hypothetical pr...    29   1.9  
U64605-3|AAF98605.3|  423|Caenorhabditis elegans Hypothetical pr...    29   3.3  
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l...    29   3.3  
U46675-3|AAB52643.1|  375|Caenorhabditis elegans Activated in bl...    28   5.8  
Z71177-2|CAA94867.1|  425|Caenorhabditis elegans Hypothetical pr...    27   7.6  
U55366-7|AAA97985.2|  323|Caenorhabditis elegans Serpentine rece...    27   7.6  

>U50311-12|AAA92315.1|  169|Caenorhabditis elegans Hypothetical
           protein C25E10.10 protein.
          Length = 169

 Score = 41.5 bits (93), Expect = 4e-04
 Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
 Frame = +3

Query: 75  IPIRKCPA-GEHSVLYCPQQAEPSCDNPTVHEMDPPSGLCDVPQCFCNVPNVRNLKTGKC 251
           IPIRK    G+  +  C    EP+CDN    E D    +C    C C    VR+  TGKC
Sbjct: 70  IPIRKPECEGDEELKACGSACEPTCDNENP-ECDL---VCMTNVCQCKKGLVRDSATGKC 125

Query: 252 IKLSKC 269
           ++ +KC
Sbjct: 126 VEKNKC 131


>Z81097-4|CAB03176.1|  100|Caenorhabditis elegans Hypothetical
           protein K07A1.6 protein.
          Length = 100

 Score = 33.9 bits (74), Expect = 0.088
 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
 Frame = +3

Query: 144 CDNPTVHEMDPPSGLCDVP----QCFCNVPNVR-NLKTGKCIKLSKC 269
           C+    H   PP   C +P     C CN    R N  TG+C++L +C
Sbjct: 51  CEKSCTHPRQPPFSQCKLPCIPYSCRCNPGFYRDNQGTGRCVRLRRC 97


>U29377-10|AAA68717.1|  140|Caenorhabditis elegans Hypothetical
           protein K05F1.10 protein.
          Length = 140

 Score = 31.1 bits (67), Expect = 0.62
 Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 7/68 (10%)
 Frame = +3

Query: 87  KCPAGEHSVLYCPQQAEPSCDNPTVHEMDPPSGL-------CDVPQCFCNVPNVRNLKTG 245
           +C   EH ++  P++    CD    +   PP  L       C  P+C CN   VR+ K G
Sbjct: 52  ECQKHEHHLICGPER---HCDRTCENLFSPPHCLNHLHHAKCYFPRCVCNDGYVRSEK-G 107

Query: 246 KCIKLSKC 269
            CI+ S C
Sbjct: 108 ICIRPSHC 115


>AF016450-10|AAB65990.1|  166|Caenorhabditis elegans Hypothetical
           protein B0238.12 protein.
          Length = 166

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 21/68 (30%), Positives = 30/68 (44%)
 Frame = +3

Query: 66  GQGIPIRKCPAGEHSVLYCPQQAEPSCDNPTVHEMDPPSGLCDVPQCFCNVPNVRNLKTG 245
           GQ +P   C         C    EPSC NP  + M     + +V  C C    VRN  T 
Sbjct: 32  GQRLP---CRGRNEEYKTCGTACEPSCTNP--NPMCTKQCINNV--CQCRSGYVRNEITR 84

Query: 246 KCIKLSKC 269
           +C++ ++C
Sbjct: 85  QCVRQAQC 92


>Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical
           protein T01D3.3b protein.
          Length = 1011

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 15/51 (29%), Positives = 19/51 (37%)
 Frame = +3

Query: 75  IPIRKCPAGEHSVLYCPQQAEPSCDNPTVHEMDPPSGLCDVPQCFCNVPNV 227
           IP + C     +   C  +   SCD P          L   P CFC +P V
Sbjct: 478 IPEQHCEHPLKNYQSCGSKCPASCDRPLSQAASIDCALSCEPGCFCRLPYV 528


>Z81110-2|CAB03259.1|  802|Caenorhabditis elegans Hypothetical
           protein T01D3.3a protein.
          Length = 802

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 15/51 (29%), Positives = 19/51 (37%)
 Frame = +3

Query: 75  IPIRKCPAGEHSVLYCPQQAEPSCDNPTVHEMDPPSGLCDVPQCFCNVPNV 227
           IP + C     +   C  +   SCD P          L   P CFC +P V
Sbjct: 269 IPEQHCEHPLKNYQSCGSKCPASCDRPLSQAASIDCALSCEPGCFCRLPYV 319


>U64605-3|AAF98605.3|  423|Caenorhabditis elegans Hypothetical
           protein C05D9.3 protein.
          Length = 423

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 15/47 (31%), Positives = 19/47 (40%)
 Frame = +3

Query: 87  KCPAGEHSVLYCPQQAEPSCDNPTVHEMDPPSGLCDVPQCFCNVPNV 227
           +CP   H V     + E  C   +   +   SG C   QC CN P V
Sbjct: 253 ECPLASHGVSKA-SELEDKCRFNSSSPVCSASGKCKCGQCQCNKPTV 298


>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
            lipoprotein receptorrelated protein 2 protein.
          Length = 2192

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 18/66 (27%), Positives = 27/66 (40%), Gaps = 4/66 (6%)
 Frame = +3

Query: 75   IPIRKCPAGEHSVLYCPQQAEPS----CDNPTVHEMDPPSGLCDVPQCFCNVPNVRNLKT 242
            I IR     +H+V +   Q  P     C + TV   D       +P+C C       + T
Sbjct: 1570 IQIRVAHPAKHTVSHITHQKNPCQSDYCPSNTVCVPDQDKNGILIPKCLCGPGRFFEVST 1629

Query: 243  GKCIKL 260
             KC++L
Sbjct: 1630 KKCMQL 1635


>U46675-3|AAB52643.1|  375|Caenorhabditis elegans Activated in
           blocked unfolded proteinresponse protein 10 protein.
          Length = 375

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +3

Query: 120 CPQQAEPSCDNPTVHEMDPPSGLCDVPQCFC 212
           C QQA+P+CD   V + +P +     P C C
Sbjct: 259 CCQQAQPACDCAPVVQQNPCACQQAQPSCDC 289


>Z71177-2|CAA94867.1|  425|Caenorhabditis elegans Hypothetical
           protein AC3.3 protein.
          Length = 425

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 11/48 (22%), Positives = 15/48 (31%)
 Frame = +3

Query: 84  RKCPAGEHSVLYCPQQAEPSCDNPTVHEMDPPSGLCDVPQCFCNVPNV 227
           ++C         C QQ  P C  P+  +       C  P      P V
Sbjct: 293 QQCQTSCQQTQQCQQQCTPQCQQPSAPQCQQCQSACQAPVATTAAPQV 340


>U55366-7|AAA97985.2|  323|Caenorhabditis elegans Serpentine
           receptor, class x protein74 protein.
          Length = 323

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +1

Query: 502 LFTINLNILDSHKIYLIXSTXTVF 573
           LFT  LN L  H+I+L  ST  V+
Sbjct: 246 LFTFGLNSLSDHRIWLFVSTMLVW 269


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,833,755
Number of Sequences: 27780
Number of extensions: 229801
Number of successful extensions: 551
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 519
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 548
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)