Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_C02
(546 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0871 + 8502396-8502417,8503606-8503732,8503891-8503990,850... 131 3e-31
04_04_1062 - 30498158-30498271,30498358-30498518,30498606-304989... 127 7e-30
06_03_0999 - 26752410-26752523,26752601-26752830,26752914-267531... 119 2e-27
05_01_0383 + 2990812-2990855,2991364-2991463,2991554-2991622,299... 85 3e-17
03_03_0001 + 13611070-13611172,13611812-13611873,13612001-136120... 76 2e-14
11_01_0218 - 1704459-1704629,1704895-1705119,1705120-1705277,170... 31 0.79
05_07_0331 - 29324967-29326256,29326919-29327020,29327226-293272... 29 2.4
12_01_0220 - 1657554-1657620,1657943-1658109,1658110-1658267,165... 29 3.2
10_05_0031 + 8356046-8356361,8356439-8356648,8356735-8357043,835... 28 4.2
03_01_0469 - 3613062-3613745,3613952-3614512,3614600-3614690,361... 28 5.6
10_01_0336 + 3707065-3707174,3707183-3708185 27 7.4
08_01_0691 - 6115476-6116423,6116871-6117299 27 9.8
07_01_0116 - 855122-855352,856733-857059,857095-858481,858636-85... 27 9.8
>08_01_0871 +
8502396-8502417,8503606-8503732,8503891-8503990,
8504725-8504793,8504870-8505043,8505196-8505373,
8505462-8505594,8505702-8505864,8507031-8507181,
8507266-8507366,8507633-8507788,8508105-8508173,
8508256-8508324,8508403-8508540,8508639-8508767,
8509013-8509053,8510019-8510106,8510199-8510339,
8510428-8510553,8510671-8510736,8510994-8511291,
8511387-8511595,8511689-8511802
Length = 953
Score = 131 bits (317), Expect = 3e-31
Identities = 59/95 (62%), Positives = 73/95 (76%)
Frame = +1
Query: 256 GVEIWRIQNFEPVAVQSKDFGKFYKGDSYIILKTTSDKRNNLSWDIHYWIGSETSQDEAG 435
G+EIWRI+NF+PV + + +GKF+ GDSYIILKTT+ K +L DIHYWIG +TSQDE+G
Sbjct: 51 GLEIWRIENFKPVPIPASSYGKFFMGDSYIILKTTALKNGSLRHDIHYWIGKDTSQDESG 110
Query: 436 AAAILTVGLDDQFGGAAVQHREAMGHESYHFLQYF 540
AAILTV LD GG AVQ+RE G+E+ FL YF
Sbjct: 111 TAAILTVELDAALGGRAVQYREIQGNETDKFLSYF 145
Score = 42.3 bits (95), Expect = 2e-04
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Frame = +1
Query: 259 VEIWRIQNFEPVAVQSKDFGKFYKGDSYII--LKTTSDKRNNLSWDIHYWIGSETSQDEA 432
+++WRI + + + + S D KFY GD YI + DK L I W G ++ +++
Sbjct: 405 LQVWRINDKDKILLPSADQSKFYTGDCYIFQYMYPGDDKEECL---IGSWFGKKSIEEDR 461
Query: 433 GAAAILTVGLDDQFGGAAVQHREAMGHESYHFLQYFTS 546
A L + + AVQ R G E F F S
Sbjct: 462 VTAISLASKMVESAKFQAVQTRLYEGKEPIQFFVIFQS 499
>04_04_1062 -
30498158-30498271,30498358-30498518,30498606-30498924,
30499412-30499477,30499601-30499726,30499821-30499961,
30500482-30500535,30501508-30501636,30501733-30501870,
30501993-30502061,30502135-30502203,30502468-30502623,
30503795-30503895,30503986-30504136,30504475-30504520,
30504539-30504637,30504796-30504928,30505018-30505195,
30505282-30505524,30505612-30505680,30505986-30506085,
30506898-30507007
Length = 923
Score = 127 bits (306), Expect = 7e-30
Identities = 57/96 (59%), Positives = 70/96 (72%)
Frame = +1
Query: 253 AGVEIWRIQNFEPVAVQSKDFGKFYKGDSYIILKTTSDKRNNLSWDIHYWIGSETSQDEA 432
+G+E+WRI+NF+PV V + GKFY GDSYIILKTT+ K + D+HYW+G +TSQDEA
Sbjct: 37 SGLEVWRIENFKPVPVPTSSHGKFYMGDSYIILKTTALKNGSFRHDLHYWLGKDTSQDEA 96
Query: 433 GAAAILTVGLDDQFGGAAVQHREAMGHESYHFLQYF 540
G AAILTV LD GG AVQ+RE G E+ L YF
Sbjct: 97 GTAAILTVELDAALGGRAVQYREVQGGETEKLLSYF 132
Score = 37.1 bits (82), Expect = 0.009
Identities = 26/97 (26%), Positives = 39/97 (40%), Gaps = 1/97 (1%)
Frame = +1
Query: 259 VEIWRIQNFEPVAVQSKDFGKFYKGDSYIILKT-TSDKRNNLSWDIHYWIGSETSQDEAG 435
+++WR+ + S D K Y GD YI T T D + I W G ++ +++
Sbjct: 409 LQVWRVNGDGKTLLSSSDQSKLYTGDCYIFQYTYTGDDKEECL--IGTWFGKKSVEEDRT 466
Query: 436 AAAILTVGLDDQFGGAAVQHREAMGHESYHFLQYFTS 546
+A L + A Q R G E F F S
Sbjct: 467 SAISLASKMFQAAKFQAAQARLYEGKEPIQFFVIFQS 503
>06_03_0999 -
26752410-26752523,26752601-26752830,26752914-26753169,
26753763-26753828,26753921-26754046,26754148-26754288,
26754377-26754387,26754523-26754670,26755326-26755454,
26755573-26755710,26755808-26755876,26755955-26756023,
26756565-26756720,26756885-26756985,26757068-26757215,
26757540-26757702,26757833-26757965,26758049-26758226,
26758330-26758572,26758664-26758732,26759063-26759187,
26759727-26759766,26760756-26760812,26762831-26762935
Length = 1004
Score = 119 bits (286), Expect = 2e-27
Identities = 53/96 (55%), Positives = 68/96 (70%)
Frame = +1
Query: 253 AGVEIWRIQNFEPVAVQSKDFGKFYKGDSYIILKTTSDKRNNLSWDIHYWIGSETSQDEA 432
+G+EIWRI+ + V V + G+F+ GDSY+ILKTT+ K + DIHYW+G +TSQDEA
Sbjct: 76 SGLEIWRIEKLQAVPVPKESHGRFFTGDSYVILKTTALKNGSFRHDIHYWLGKDTSQDEA 135
Query: 433 GAAAILTVGLDDQFGGAAVQHREAMGHESYHFLQYF 540
G AAI TV LD GG AVQ+RE G+E+ FL YF
Sbjct: 136 GTAAIKTVELDAALGGRAVQYREVQGNETERFLSYF 171
Score = 36.7 bits (81), Expect = 0.012
Identities = 24/94 (25%), Positives = 37/94 (39%)
Frame = +1
Query: 259 VEIWRIQNFEPVAVQSKDFGKFYKGDSYIILKTTSDKRNNLSWDIHYWIGSETSQDEAGA 438
+++WR+ E + + KFY GD YI + + I W G ++ QDE
Sbjct: 453 LQVWRVNGTEKTFLSFSEQCKFYSGDCYIFQYSYPGEEGE-ECLIGTWFGKKSVQDEKTT 511
Query: 439 AAILTVGLDDQFGGAAVQHREAMGHESYHFLQYF 540
A + + + AV R G E F F
Sbjct: 512 AISVASKMVESLKFQAVMVRLYEGKEPAEFFSIF 545
>05_01_0383 +
2990812-2990855,2991364-2991463,2991554-2991622,
2991724-2991960,2992045-2992228,2992307-2992442,
2992529-2992691,2992958-2993108,2993154-2993278,
2993349-2993504,2993792-2993860,2993951-2994019,
2994127-2994264,2994626-2994773,2994856-2994866,
2995212-2995352,2995441-2995569,2995860-2995899,
2996020-2996348,2996902-2996919
Length = 818
Score = 85.4 bits (202), Expect = 3e-17
Identities = 40/107 (37%), Positives = 57/107 (53%)
Frame = +1
Query: 220 VHPAFANAGRQAGVEIWRIQNFEPVAVQSKDFGKFYKGDSYIILKTTSDKRNNLSWDIHY 399
V AF G + G++IW I +A++ GKFY G++YIIL T K ++HY
Sbjct: 4 VDDAFLGVGDKPGLDIWCIMGSNLIAIEKSLHGKFYTGNTYIILSTVELKSGVRQHNVHY 63
Query: 400 WIGSETSQDEAGAAAILTVGLDDQFGGAAVQHREAMGHESYHFLQYF 540
W+G E +++ A+ + LD G VQ+RE G ES FL YF
Sbjct: 64 WVGEEAKEEDCLTASDKAIELDVALGSNTVQYRETQGEESDKFLSYF 110
Score = 34.3 bits (75), Expect = 0.064
Identities = 24/96 (25%), Positives = 41/96 (42%)
Frame = +1
Query: 259 VEIWRIQNFEPVAVQSKDFGKFYKGDSYIILKTTSDKRNNLSWDIHYWIGSETSQDEAGA 438
+++W + N + +++ + Y GD YII + + + W G + ++ A
Sbjct: 402 LKVWLVDNGSVTLLCTEEQEQLYNGDCYIIRYSYIEDGKDYHL-FFAWSGLNSINEDRVA 460
Query: 439 AAILTVGLDDQFGGAAVQHREAMGHESYHFLQYFTS 546
AA L G+ D G AV + G E F F S
Sbjct: 461 AASLMSGMIDSVKGHAVVAQVFEGREPEMFFLVFKS 496
>03_03_0001 +
13611070-13611172,13611812-13611873,13612001-13612072,
13612158-13612394,13612473-13612650,13612731-13612863,
13613686-13613845,13613925-13614078,13614159-13614262,
13614354-13614512,13615399-13615467,13615543-13615611,
13615772-13615909,13616044-13616124,13616805-13616933,
13617717-13617864,13618007-13618017,13618094-13618234,
13618314-13618439,13619164-13619220,13619355-13619453,
13619540-13619762,13620236-13620480,13621325-13621438
Length = 1003
Score = 76.2 bits (179), Expect = 2e-14
Identities = 34/52 (65%), Positives = 39/52 (75%)
Frame = +1
Query: 385 WDIHYWIGSETSQDEAGAAAILTVGLDDQFGGAAVQHREAMGHESYHFLQYF 540
+DIH+WIG ++SQDEAG AAI TV LD GG AVQHRE G+ES FL YF
Sbjct: 67 FDIHFWIGKDSSQDEAGTAAIKTVELDTMLGGRAVQHRELQGYESDKFLSYF 118
Score = 48.0 bits (109), Expect = 5e-06
Identities = 35/132 (26%), Positives = 58/132 (43%), Gaps = 2/132 (1%)
Frame = +1
Query: 151 IRQQSVNTQITSLSDKDARTKARVHPAFANAGRQAGVEIWRIQNFEPVAVQSKDFGKFYK 330
++QQ V+ I S A V P G+ +E++ + A+ ++ GKFY
Sbjct: 369 LKQQGVD--IKGASKSSAPVDEEVPPLLEGDGK---LEVYCVNGSAKTALPKEELGKFYS 423
Query: 331 GDSYIILKT--TSDKRNNLSWDIHYWIGSETSQDEAGAAAILTVGLDDQFGGAAVQHREA 504
GD YI+L T + DKR + + YWIG ++ ++ A + + G + R
Sbjct: 424 GDCYIVLYTYHSGDKRE--EFYLTYWIGKDSIPEDQEMAFQTANSIWNSLKGRPILGRIY 481
Query: 505 MGHESYHFLQYF 540
G E F+ F
Sbjct: 482 QGKEPPQFIALF 493
>11_01_0218 -
1704459-1704629,1704895-1705119,1705120-1705277,
1705378-1705463,1705574-1705823,1706220-1707246
Length = 638
Score = 30.7 bits (66), Expect = 0.79
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +1
Query: 388 DIHYWIGSETSQDEAGAAAILTVGLDDQFGGAAVQHREAMGHESY 522
D+H ++ S ++ + AA G FGG H +A G ++Y
Sbjct: 303 DLHMFVWSSSASPVSERAAAAAAGAVHVFGGGGADHGDAKGAQAY 347
>05_07_0331 -
29324967-29326256,29326919-29327020,29327226-29327278,
29327628-29327674,29327762-29327841,29327933-29328016,
29328383-29328433,29328925-29329050,29329231-29329347,
29329710-29329851,29329986-29330053,29330509-29330608,
29330713-29330840,29330929-29330997,29331083-29331205
Length = 859
Score = 29.1 bits (62), Expect = 2.4
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +1
Query: 247 RQAGVEIWRIQNFEPVAVQSKDFGKFYKGDSYIILKTTSDKRNNLSWDIHYWIGSETS 420
++ V +WR+ EP+ V SK FG +IL+ + RN L +W TS
Sbjct: 569 QRVAVCVWRLATGEPLRVVSKRFGLGISTCHKLILEVCAAIRNLLMPRFLHWPDHPTS 626
>12_01_0220 - 1657554-1657620,1657943-1658109,1658110-1658267,
1658362-1658447,1658559-1658808,1659194-1660320,
1662207-1662351,1663555-1663696,1663775-1663828,
1663914-1663985,1664710-1664778,1664885-1664926,
1665024-1665092,1665257-1665394,1665518-1665628,
1665704-1665836,1666834-1666889,1667191-1667901
Length = 1198
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +1
Query: 388 DIHYWI-GSETSQDEAGAAAILTVGLDDQFGGAAVQHREAMGHESY 522
D+H ++ S S AAA G FGG H +A G ++Y
Sbjct: 916 DLHMFVWSSSASPVSERAAAAAAAGAVHVFGGGGADHGDAKGAQAY 961
>10_05_0031 +
8356046-8356361,8356439-8356648,8356735-8357043,
8357225-8357347,8357428-8357502,8357597-8357687,
8357775-8357866,8357890-8358020
Length = 448
Score = 28.3 bits (60), Expect = 4.2
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = -3
Query: 463 RGRQSRWQPLPLHPD*SRFRSSNVYPMIDCSFYPMSSLELYRNLLCRTSQSLSI 302
RG QP PLHP +R R +V ++D + S L L + Q+LSI
Sbjct: 340 RGAPVGEQPAPLHPKSTRKRKVSVKVLLDKTSKKKSDLSLQGLWIDVLDQNLSI 393
>03_01_0469 -
3613062-3613745,3613952-3614512,3614600-3614690,
3614782-3614870,3614962-3615027,3615309-3615423,
3615521-3615966
Length = 683
Score = 27.9 bits (59), Expect = 5.6
Identities = 15/63 (23%), Positives = 33/63 (52%)
Frame = +1
Query: 10 VDQ*AGRCRSRYTCLLRTSLIRT*NKMKFISVWLLVTLGACAYARTAIRQQSVNTQITSL 189
VD G S++ +L T+ + + F+S+ LV +G C + I+ + N++ + +
Sbjct: 293 VDTSEGPKNSKWIFVLSTTRVLYIGTVPFLSIKQLVNIGICHLSIVHIQYMNHNSETSPI 352
Query: 190 SDK 198
+D+
Sbjct: 353 TDE 355
>10_01_0336 + 3707065-3707174,3707183-3708185
Length = 370
Score = 27.5 bits (58), Expect = 7.4
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -2
Query: 509 PIASRCCTAAPPNWSS 462
P A CC A+PP W S
Sbjct: 26 PTAPSCCIASPPTWRS 41
>08_01_0691 - 6115476-6116423,6116871-6117299
Length = 458
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +1
Query: 478 GAAVQHREAMGHESYHFLQ 534
G+AV H GH +HFLQ
Sbjct: 155 GSAVHHSAVDGHSMFHFLQ 173
>07_01_0116 -
855122-855352,856733-857059,857095-858481,858636-858895
Length = 734
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -2
Query: 518 LSWPIASRCCTAAPPNWSSRPTVK 447
L W IA+ CC PPN+ +K
Sbjct: 500 LIWHIATCCCEKKPPNYQHEEELK 523
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,884,623
Number of Sequences: 37544
Number of extensions: 334926
Number of successful extensions: 1004
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 974
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1001
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1222086348
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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