Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_C02
(546 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70755-3|CAA94782.1| 475|Caenorhabditis elegans Hypothetical pr... 98 4e-21
U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I ho... 74 6e-14
L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophi... 74 6e-14
U80848-1|AAB37990.3| 389|Caenorhabditis elegans Hypothetical pr... 30 1.2
AF016655-9|AAK31440.1| 348|Caenorhabditis elegans Hypothetical ... 28 5.0
Z48045-5|CAD56564.1| 374|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z48045-4|CAA88102.2| 404|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z46791-6|CAA86759.1| 395|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z83238-6|CAB05800.1| 943|Caenorhabditis elegans Hypothetical pr... 27 8.8
U80446-6|AAB37805.2| 783|Caenorhabditis elegans Hypothetical pr... 27 8.8
U61957-3|AAX55702.1| 395|Caenorhabditis elegans Temporarily ass... 27 8.8
U61957-2|AAX55703.1| 386|Caenorhabditis elegans Temporarily ass... 27 8.8
U41508-3|AAN39664.1| 317|Caenorhabditis elegans Set (trithorax/... 27 8.8
U41508-2|AAN39665.2| 552|Caenorhabditis elegans Set (trithorax/... 27 8.8
>Z70755-3|CAA94782.1| 475|Caenorhabditis elegans Hypothetical
protein K06A4.3 protein.
Length = 475
Score = 97.9 bits (233), Expect = 4e-21
Identities = 48/105 (45%), Positives = 58/105 (55%)
Frame = +1
Query: 226 PAFANAGRQAGVEIWRIQNFEPVAVQSKDFGKFYKGDSYIILKTTSDKRNNLSWDIHYWI 405
PA A G++ G+ +WRI F V D G FY GD+YI L D WD+H+W+
Sbjct: 8 PALAEIGKKNGLLVWRINKFVLEPVPEVDHGVFYIGDAYIALYQKYDG----CWDVHFWL 63
Query: 406 GSETSQDEAGAAAILTVGLDDQFGGAAVQHREAMGHESYHFLQYF 540
G S DE G AAI TV +DD GG QHRE +ES FL YF
Sbjct: 64 GKNASTDEIGVAAIKTVEIDDSLGGIPTQHREIQNYESPLFLSYF 108
>U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I
homolog protein.
Length = 1257
Score = 74.1 bits (174), Expect = 6e-14
Identities = 34/101 (33%), Positives = 50/101 (49%)
Frame = +1
Query: 238 NAGRQAGVEIWRIQNFEPVAVQSKDFGKFYKGDSYIILKTTSDKRNNLSWDIHYWIGSET 417
+ G G+ +W I+NF P + G+FY D+Y++LKTT + L I YW+G
Sbjct: 503 DVGSDEGMWVWEIENFYPSIMDEAFHGQFYDADAYLVLKTTREASGQLRHAIFYWLGEHA 562
Query: 418 SQDEAGAAAILTVGLDDQFGGAAVQHREAMGHESYHFLQYF 540
S D+ +A+ VGL + RE M E+ FL F
Sbjct: 563 SLDKGMCSAVHAVGLRNHLNATCRTQREEMNDETEEFLTLF 603
>L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophila
flightless) homologprotein 1 protein.
Length = 1257
Score = 74.1 bits (174), Expect = 6e-14
Identities = 34/101 (33%), Positives = 50/101 (49%)
Frame = +1
Query: 238 NAGRQAGVEIWRIQNFEPVAVQSKDFGKFYKGDSYIILKTTSDKRNNLSWDIHYWIGSET 417
+ G G+ +W I+NF P + G+FY D+Y++LKTT + L I YW+G
Sbjct: 503 DVGSDEGMWVWEIENFYPSIMDEAFHGQFYDADAYLVLKTTREASGQLRHAIFYWLGEHA 562
Query: 418 SQDEAGAAAILTVGLDDQFGGAAVQHREAMGHESYHFLQYF 540
S D+ +A+ VGL + RE M E+ FL F
Sbjct: 563 SLDKGMCSAVHAVGLRNHLNATCRTQREEMNDETEEFLTLF 603
>U80848-1|AAB37990.3| 389|Caenorhabditis elegans Hypothetical
protein T10H10.3 protein.
Length = 389
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 268 WRIQNFEPVAVQSKDFGKFYKGDSYIILKTTSDKRNNLSWDIH 396
W + NFE + K YK + + I+K KRN L+ +IH
Sbjct: 332 WDLFNFEQLTEYEHLMMKLYKQEVFDIVKKYEKKRNVLNREIH 374
>AF016655-9|AAK31440.1| 348|Caenorhabditis elegans Hypothetical
protein C17F4.5 protein.
Length = 348
Score = 27.9 bits (59), Expect = 5.0
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -3
Query: 349 ELYRNLLCRTSQSLSIGLRLVQNSESAKFRHQL 251
+L LL + LSIGL L+ NSE KF L
Sbjct: 95 DLISRLLSGYQEPLSIGLLLIPNSEVLKFPESL 127
>Z48045-5|CAD56564.1| 374|Caenorhabditis elegans Hypothetical
protein C41C4.7b protein.
Length = 374
Score = 27.5 bits (58), Expect = 6.7
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +1
Query: 109 LLVTLGACAYARTAIRQQSVNTQITSLS-DKDARTKARVHP-AFANAGRQAGVEIWRIQN 282
+L++ G C+ A T +R+ + + +TSLS K A T + P A+ N R++ V W I N
Sbjct: 245 VLISFGFCSAAATVLRKIQLLSFVTSLSYIKMAVTCCKYFPQAYFNYTRKSTVG-WSIGN 303
>Z48045-4|CAA88102.2| 404|Caenorhabditis elegans Hypothetical
protein C41C4.7a protein.
Length = 404
Score = 27.5 bits (58), Expect = 6.7
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +1
Query: 109 LLVTLGACAYARTAIRQQSVNTQITSLS-DKDARTKARVHP-AFANAGRQAGVEIWRIQN 282
+L++ G C+ A T +R+ + + +TSLS K A T + P A+ N R++ V W I N
Sbjct: 245 VLISFGFCSAAATVLRKIQLLSFVTSLSYIKMAVTCCKYFPQAYFNYTRKSTVG-WSIGN 303
>Z46791-6|CAA86759.1| 395|Caenorhabditis elegans Hypothetical
protein C09G5.7 protein.
Length = 395
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/58 (24%), Positives = 28/58 (48%)
Frame = +1
Query: 157 QQSVNTQITSLSDKDARTKARVHPAFANAGRQAGVEIWRIQNFEPVAVQSKDFGKFYK 330
+ S N+ +S S K RT+ + P N ++ G +W + + +P + + G+ K
Sbjct: 160 ESSHNSGQSSKSRKSQRTRGKSTPLDRNIFKENGEPVWVVPDRKPGELVMNEHGEMVK 217
>Z83238-6|CAB05800.1| 943|Caenorhabditis elegans Hypothetical
protein T08G3.7 protein.
Length = 943
Score = 27.1 bits (57), Expect = 8.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2
Query: 98 MNFILFYVRINDVRKRHVYRDRQRPAYWS 12
MNF++F D+ R V+RD R YW+
Sbjct: 197 MNFMVF----PDIPARDVFRDNSRKVYWT 221
>U80446-6|AAB37805.2| 783|Caenorhabditis elegans Hypothetical
protein F56A3.1 protein.
Length = 783
Score = 27.1 bits (57), Expect = 8.8
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 2/102 (1%)
Frame = +1
Query: 31 CRSRYTCLLRTSLIRT*NKMKFISVWLLVTLGACAYARTA--IRQQSVNTQITSLSDKDA 204
C S+Y +L + K F +L T + A RTA ++Q + T + LSD
Sbjct: 254 CCSKYKPILNALTV----KETFFRCSVLTTSTSNASRRTASITKRQQMITNL-QLSDWIE 308
Query: 205 RTKARVHPAFANAGRQAGVEIWRIQNFEPVAVQSKDFGKFYK 330
+T+A AF +A AGVE+ ++ + A ++ GKF K
Sbjct: 309 QTEADF--AFRSANIPAGVEVKTWKSEDNSAKHAEITGKFEK 348
>U61957-3|AAX55702.1| 395|Caenorhabditis elegans Temporarily
assigned gene nameprotein 49, isoform a protein.
Length = 395
Score = 27.1 bits (57), Expect = 8.8
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = -3
Query: 442 QPLPLHPD*SRFRSSNVYPMIDCSFYPMSSLELYRNLLCRTSQSLS 305
Q LP++PD +++ NVY +I F PM L+ ++ SLS
Sbjct: 199 QCLPVYPDAGWWKTYNVYLVIIQYFVPMIILDTAYTMIAVKIWSLS 244
>U61957-2|AAX55703.1| 386|Caenorhabditis elegans Temporarily
assigned gene nameprotein 49, isoform b protein.
Length = 386
Score = 27.1 bits (57), Expect = 8.8
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = -3
Query: 442 QPLPLHPD*SRFRSSNVYPMIDCSFYPMSSLELYRNLLCRTSQSLS 305
Q LP++PD +++ NVY +I F PM L+ ++ SLS
Sbjct: 199 QCLPVYPDAGWWKTYNVYLVIIQYFVPMIILDTAYTMIAVKIWSLS 244
>U41508-3|AAN39664.1| 317|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 20,
isoform a protein.
Length = 317
Score = 27.1 bits (57), Expect = 8.8
Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +1
Query: 268 WRIQNFEPVAVQSKDFGKFYKGDSYIILKTTSDKRNNL--SWDIHYWIGSETSQDE 429
WRI+ +V + + YK +S ++ K TS ++ + S+ + + +E Q+E
Sbjct: 8 WRIEVNPSTSVYFNESQELYKPNSNLVFKHTSTNKSTMEGSYRMQLRVNAEIEQEE 63
>U41508-2|AAN39665.2| 552|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 20,
isoform b protein.
Length = 552
Score = 27.1 bits (57), Expect = 8.8
Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +1
Query: 268 WRIQNFEPVAVQSKDFGKFYKGDSYIILKTTSDKRNNL--SWDIHYWIGSETSQDE 429
WRI+ +V + + YK +S ++ K TS ++ + S+ + + +E Q+E
Sbjct: 209 WRIEVNPSTSVYFNESQELYKPNSNLVFKHTSTNKSTMEGSYRMQLRVNAEIEQEE 264
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,162,486
Number of Sequences: 27780
Number of extensions: 273509
Number of successful extensions: 750
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 749
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1102518352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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