BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_C01
(631 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ845189-1|CAH60166.1| 515|Tribolium castaneum putative esteras... 24 1.2
AJ845188-1|CAH60165.1| 517|Tribolium castaneum putative esteras... 24 1.2
EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetyla... 22 3.7
AM292362-1|CAL23174.2| 398|Tribolium castaneum gustatory recept... 22 3.7
AJ845187-1|CAH60164.1| 515|Tribolium castaneum esterase protein. 22 3.7
AJ844897-1|CAH59956.1| 517|Tribolium castaneum esterase protein. 22 3.7
AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less prot... 22 4.9
>AJ845189-1|CAH60166.1| 515|Tribolium castaneum putative esterase
protein.
Length = 515
Score = 23.8 bits (49), Expect = 1.2
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 511 VGYQFSVKLVPDLDADNLQ 567
+GY F KL P+L A +L+
Sbjct: 427 IGYLFKTKLSPELKAGSLE 445
>AJ845188-1|CAH60165.1| 517|Tribolium castaneum putative esterase
protein.
Length = 517
Score = 23.8 bits (49), Expect = 1.2
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 511 VGYQFSVKLVPDLDADNLQ 567
+GY F KL P+L A +L+
Sbjct: 429 IGYLFKTKLSPELKAGSLE 447
>EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetylase
1 protein.
Length = 534
Score = 22.2 bits (45), Expect = 3.7
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -3
Query: 425 VMNPRNGTWDRSSARWRLRCV 363
+ NPR T ++ WR +CV
Sbjct: 465 IQNPRTITESKNFEPWREKCV 485
>AM292362-1|CAL23174.2| 398|Tribolium castaneum gustatory receptor
candidate 41 protein.
Length = 398
Score = 22.2 bits (45), Expect = 3.7
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = -3
Query: 479 TRIQRYCEALRPVGQCCDVMNPRNGTWDRSSARW 378
TR++R L GQ C + P+ + + RW
Sbjct: 7 TRVKRASNQLFRFGQFCAICVPKITSTNNEVPRW 40
>AJ845187-1|CAH60164.1| 515|Tribolium castaneum esterase protein.
Length = 515
Score = 22.2 bits (45), Expect = 3.7
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +1
Query: 511 VGYQFSVKLVPDLDADNLQ 567
+GY F KL P+L +L+
Sbjct: 427 IGYLFKTKLSPELKTGSLE 445
>AJ844897-1|CAH59956.1| 517|Tribolium castaneum esterase protein.
Length = 517
Score = 22.2 bits (45), Expect = 3.7
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +1
Query: 511 VGYQFSVKLVPDLDADNLQ 567
+GY F KL P+L +L+
Sbjct: 429 IGYLFKTKLSPELKTGSLE 447
>AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less
protein.
Length = 312
Score = 21.8 bits (44), Expect = 4.9
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +2
Query: 155 SRGAPAPRPACSPCGR 202
+RG P PA S CG+
Sbjct: 289 TRGTPRTTPASSRCGQ 304
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,260
Number of Sequences: 336
Number of extensions: 1716
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16188355
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -