Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_C01
         (631 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           25   0.80 
AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.         22   5.7  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   9.9  

>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 24.6 bits (51), Expect = 0.80
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = -3

Query: 122 CTSIAISVDTCNLTSYGAGFSVL*MRHCIKCIC 24
           C   +I VD C+L   G G+    +    +C C
Sbjct: 103 CNDTSIGVDGCDLMCCGRGYKTQEVTVVERCAC 135


>AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.
          Length = 104

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = -3

Query: 431 CDVMNPRNGTWDRSSARWRLRCVARSRAEGELGNRGC 321
           CDV++ ++     + +   +RC+A+ R  G   N  C
Sbjct: 64  CDVLSWQSKWLSINHSACAIRCLAQRRKGGSCRNGVC 100


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +2

Query: 164 APAPRPACSPC 196
           +P+PRP   PC
Sbjct: 883 SPSPRPLVGPC 893


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,231
Number of Sequences: 438
Number of extensions: 1969
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18826962
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)