Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_B20
(608 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC103567-9|AAL35735.1| 204|Caenorhabditis elegans Hypothetical ... 58 5e-09
AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical ... 52 2e-07
U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical pr... 51 6e-07
AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse trans... 51 7e-07
AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical ... 51 7e-07
AF016451-4|AAB65996.1| 388|Caenorhabditis elegans Activated in ... 30 1.5
U40028-2|AAY55874.1| 1200|Caenorhabditis elegans Hypothetical pr... 29 2.0
AF016428-6|AAK71396.2| 1733|Caenorhabditis elegans Hypothetical ... 29 2.0
AF016451-5|AAB65995.1| 438|Caenorhabditis elegans Activated in ... 29 3.4
AF016451-3|AAB66001.1| 388|Caenorhabditis elegans Prion-like-(q... 29 3.4
AC006625-13|ABI18147.1| 273|Caenorhabditis elegans Abnormal che... 29 3.4
AC006625-12|AAK68272.2| 214|Caenorhabditis elegans Abnormal che... 29 3.4
Z81146-10|CAB54274.2| 796|Caenorhabditis elegans Hypothetical p... 28 4.5
Z81146-9|CAB03528.1| 817|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z81121-2|CAB54308.2| 796|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z81121-1|CAB03351.1| 817|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z70308-14|CAB54254.2| 796|Caenorhabditis elegans Hypothetical p... 28 4.5
Z70308-13|CAA94353.1| 817|Caenorhabditis elegans Hypothetical p... 28 4.5
Z29967-2|CAA82855.1| 722|Caenorhabditis elegans lin-15A protein. 28 4.5
U88182-4|AAB42307.1| 113|Caenorhabditis elegans Hypothetical pr... 28 4.5
AY090019-1|AAM09088.1| 796|Caenorhabditis elegans minibrain kin... 28 4.5
Z83318-5|CAE54897.1| 203|Caenorhabditis elegans Hypothetical pr... 28 6.0
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 27 7.9
>AC103567-9|AAL35735.1| 204|Caenorhabditis elegans Hypothetical
protein Y51F10.8 protein.
Length = 204
Score = 58.0 bits (134), Expect = 5e-09
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Frame = -1
Query: 512 ALERAILGVSQRDQ----IMNEEIRRRNKVTDISRRITKLK*QWDGQIARRTDARWRQRV 345
ALER ++G++ +Q I EE+R ++K+ D I K K W G +ARRTD RW +
Sbjct: 82 ALERKLVGLTLTEQRERNIHREEVREKSKLRDPLIHIKKRKLGWAGHVARRTDGRWTTLM 141
Query: 344 LEWVPCTVRRSVSRP 300
+W P +R V RP
Sbjct: 142 NDWCPRDEKRPVGRP 156
>AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical
protein Y32G9A.9 protein.
Length = 417
Score = 52.4 bits (120), Expect = 2e-07
Identities = 38/117 (32%), Positives = 61/117 (52%), Gaps = 7/117 (5%)
Frame = -1
Query: 512 ALERAILGVS---QRDQIMN-EEIRRRNKVTDISRRITKLK*QWDGQIARRTDARWRQRV 345
+LER ++G++ QR++ ++ E+IR+ + V D + K K W G +ARR D RW +
Sbjct: 297 SLERRLVGITLTQQRERDLHREDIRKMSLVRDPLNFVKKRKLGWAGHVARRKDGRWTTLM 356
Query: 344 LEWVPCTVRRSVSRPTTW*RSRESVECGWRKTVCSGDL*GR---PMSSSGRFSVEWI 183
EW P +R V RP R +S+ RK + + D G P S+ + EW+
Sbjct: 357 TEWRPYGWKRPVGRPPM--RWTDSL----RKEITTRDADGEVITPWSTIAKDRKEWL 407
>U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical protein
F20B4.7 protein.
Length = 891
Score = 51.2 bits (117), Expect = 6e-07
Identities = 38/117 (32%), Positives = 60/117 (51%), Gaps = 7/117 (5%)
Frame = -1
Query: 512 ALERAILGVS---QRDQIMN-EEIRRRNKVTDISRRITKLK*QWDGQIARRTDARWRQRV 345
+LER ++G++ QR++ ++ E+IR + V D + K K W G +ARR D RW +
Sbjct: 771 SLERRLVGITLTQQRERDLHREDIRTMSLVRDPLNFVKKRKLGWAGHVARRKDGRWTTLM 830
Query: 344 LEWVPCTVRRSVSRPTTW*RSRESVECGWRKTVCSGDL*GR---PMSSSGRFSVEWI 183
EW P +R V RP R +S+ RK + + D G P S+ + EW+
Sbjct: 831 TEWRPYGWKRPVGRPPM--RWTDSL----RKEITTRDADGEVITPWSTIAKDRKEWL 881
>AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse
transcriptase protein.
Length = 1066
Score = 50.8 bits (116), Expect = 7e-07
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Frame = -1
Query: 512 ALERAILGVS---QRDQIMN-EEIRRRNKVTDISRRITKLK*QWDGQIARRTDARWRQRV 345
+LER ++G++ QR++ ++ E+IR + V D + K K W G +ARR D RW +
Sbjct: 946 SLERRLVGITLTQQRERDLHREDIRTMSLVRDPLNFVKKRKLGWAGHVARRKDGRWTTLM 1005
Query: 344 LEWVPCTVRRSVSRP 300
EW P +R V RP
Sbjct: 1006 TEWRPYGWKRPVGRP 1020
>AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical
protein K10F12.5 protein.
Length = 805
Score = 50.8 bits (116), Expect = 7e-07
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Frame = -1
Query: 512 ALERAILGVS---QRDQIMN-EEIRRRNKVTDISRRITKLK*QWDGQIARRTDARWRQRV 345
+LER ++G++ QR++ ++ E+IR + V D + K K W G +ARR D RW +
Sbjct: 685 SLERRLVGITLTQQRERDLHREDIRTMSLVRDPLNFVKKRKLGWAGHVARRKDGRWTTLM 744
Query: 344 LEWVPCTVRRSVSRP 300
EW P +R V RP
Sbjct: 745 TEWRPYGWKRPVGRP 759
>AF016451-4|AAB65996.1| 388|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 6 protein.
Length = 388
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 108 VCNRTMSKKNQMVRKQMNH*TETQIY-PFNRKSSTTRHRSP 227
+C +T Q+ + MN T TQ+Y P+N +S + +P
Sbjct: 230 ICQQTAQATQQVYNQNMNQNTNTQMYNPYNTNTSQNANCAP 270
>U40028-2|AAY55874.1| 1200|Caenorhabditis elegans Hypothetical
protein T05A7.11 protein.
Length = 1200
Score = 29.5 bits (63), Expect = 2.0
Identities = 19/57 (33%), Positives = 34/57 (59%)
Frame = +1
Query: 46 VAFNGERVIKIGSFYILKCVQYVTERCQRKIKWCENK*ITKPKHKSIHSTENRPLLD 216
V NG + K SF+ K ++++ +C+ KIK+ E K + K KH + +T +R ++D
Sbjct: 71 VTING-KFCKESSFH--KRIRFLKNKCRVKIKYFEVKELHKLKHWDLQNT-HRIIMD 123
>AF016428-6|AAK71396.2| 1733|Caenorhabditis elegans Hypothetical
protein T05C3.2 protein.
Length = 1733
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/38 (31%), Positives = 25/38 (65%)
Frame = +2
Query: 209 YST*VSPKDLHYKRSCATRIQRIPATFTRSSVYSRYVL 322
YS+ +S D+H KRS +T ++ + +SS+ S++++
Sbjct: 2 YSSSISRSDVHKKRSKSTSTSQLTRSSKKSSIESKFLI 39
>AF016451-5|AAB65995.1| 438|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 7 protein.
Length = 438
Score = 28.7 bits (61), Expect = 3.4
Identities = 12/41 (29%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 108 VCNRTMSKKNQMVRKQMNH*TETQIY-PFNRKSSTTRHRSP 227
+C +T Q+ + MN T TQ+Y P+N ++ + +P
Sbjct: 230 ICQQTAQATQQVYNQNMNQNTNTQMYNPYNTNTNQNANCAP 270
>AF016451-3|AAB66001.1| 388|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 5
protein.
Length = 388
Score = 28.7 bits (61), Expect = 3.4
Identities = 12/41 (29%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 108 VCNRTMSKKNQMVRKQMNH*TETQIY-PFNRKSSTTRHRSP 227
+C +T Q+ + MN T TQ+Y P+N ++ + +P
Sbjct: 230 ICQQTAQATQQVYNQNMNQNTNTQMYNPYNTNTNQNANCAP 270
>AC006625-13|ABI18147.1| 273|Caenorhabditis elegans Abnormal
chemotaxis protein 1,isoform b protein.
Length = 273
Score = 28.7 bits (61), Expect = 3.4
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 99 VCPVCNRTMSKKNQMVRKQMNH*TETQIYP 188
+CPVCNR S+ + +V + H T + YP
Sbjct: 195 MCPVCNRPFSQSSSLVTHRRTH-TGERPYP 223
>AC006625-12|AAK68272.2| 214|Caenorhabditis elegans Abnormal
chemotaxis protein 1,isoform a protein.
Length = 214
Score = 28.7 bits (61), Expect = 3.4
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 99 VCPVCNRTMSKKNQMVRKQMNH*TETQIYP 188
+CPVCNR S+ + +V + H T + YP
Sbjct: 136 MCPVCNRPFSQSSSLVTHRRTH-TGERPYP 164
>Z81146-10|CAB54274.2| 796|Caenorhabditis elegans Hypothetical
protein F49E11.1c protein.
Length = 796
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +3
Query: 264 AFNGFPRPLPGRRSTHATSYGAWYPFENSLPPSGIGSTSN 383
+F P G S+ + + Y +NSLPP+ +GS+ N
Sbjct: 65 SFAAAPTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQN 104
>Z81146-9|CAB03528.1| 817|Caenorhabditis elegans Hypothetical
protein F49E11.1b protein.
Length = 817
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +3
Query: 264 AFNGFPRPLPGRRSTHATSYGAWYPFENSLPPSGIGSTSN 383
+F P G S+ + + Y +NSLPP+ +GS+ N
Sbjct: 65 SFAAAPTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQN 104
>Z81121-2|CAB54308.2| 796|Caenorhabditis elegans Hypothetical
protein F49E11.1c protein.
Length = 796
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +3
Query: 264 AFNGFPRPLPGRRSTHATSYGAWYPFENSLPPSGIGSTSN 383
+F P G S+ + + Y +NSLPP+ +GS+ N
Sbjct: 65 SFAAAPTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQN 104
>Z81121-1|CAB03351.1| 817|Caenorhabditis elegans Hypothetical
protein F49E11.1b protein.
Length = 817
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +3
Query: 264 AFNGFPRPLPGRRSTHATSYGAWYPFENSLPPSGIGSTSN 383
+F P G S+ + + Y +NSLPP+ +GS+ N
Sbjct: 65 SFAAAPTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQN 104
>Z70308-14|CAB54254.2| 796|Caenorhabditis elegans Hypothetical
protein F49E11.1c protein.
Length = 796
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +3
Query: 264 AFNGFPRPLPGRRSTHATSYGAWYPFENSLPPSGIGSTSN 383
+F P G S+ + + Y +NSLPP+ +GS+ N
Sbjct: 65 SFAAAPTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQN 104
>Z70308-13|CAA94353.1| 817|Caenorhabditis elegans Hypothetical
protein F49E11.1b protein.
Length = 817
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +3
Query: 264 AFNGFPRPLPGRRSTHATSYGAWYPFENSLPPSGIGSTSN 383
+F P G S+ + + Y +NSLPP+ +GS+ N
Sbjct: 65 SFAAAPTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQN 104
>Z29967-2|CAA82855.1| 722|Caenorhabditis elegans lin-15A protein.
Length = 722
Score = 28.3 bits (60), Expect = 4.5
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1
Query: 341 EWVPCTVRRSVSRPTTW*RSRESVECGW 258
+W P V +++ R TW RSR+S C W
Sbjct: 686 KWPPHRVSQNIFRQRTWKRSRKS--CSW 711
>U88182-4|AAB42307.1| 113|Caenorhabditis elegans Hypothetical
protein C53C11.2 protein.
Length = 113
Score = 28.3 bits (60), Expect = 4.5
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 76 IGSFYILKCVQYVTERCQRKIKWCENK 156
+G +L CV++VT+R +RK + NK
Sbjct: 46 LGCILLLLCVKFVTDRDERKTQAARNK 72
>AY090019-1|AAM09088.1| 796|Caenorhabditis elegans minibrain kinase
2 protein.
Length = 796
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +3
Query: 264 AFNGFPRPLPGRRSTHATSYGAWYPFENSLPPSGIGSTSN 383
+F P G S+ + + Y +NSLPP+ +GS+ N
Sbjct: 65 SFAAAPTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQN 104
>Z83318-5|CAE54897.1| 203|Caenorhabditis elegans Hypothetical
protein F55B11.5 protein.
Length = 203
Score = 27.9 bits (59), Expect = 6.0
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 112 VTERCQRKIKWCENK*ITKPKHKSIHSTENRPLLD 216
V+E C++ K E K PK KS+ E P++D
Sbjct: 101 VSENCEKPTKVFEEKIEVLPKDKSVSVKEINPMVD 135
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 27.5 bits (58), Expect = 7.9
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Frame = +3
Query: 201 SSTTRHRSPLKISTTNGLAPPAFNGFPRPLPG-RRSTH---ATSYGAWYPFENSLPPSGI 368
SS T S + +T+ P+ +G P P +ST +T+ G ++ PS I
Sbjct: 1247 SSATSLSSSSPVPSTSQSPNPSTSGSSTPTPNPSQSTSPVVSTTTGEMTSHGSTQTPSTI 1306
Query: 369 GSTSNLPIPLSLKFSNSSGN 428
GST P +S SNSSG+
Sbjct: 1307 GSTVTQPSTVS--GSNSSGS 1324
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,271,151
Number of Sequences: 27780
Number of extensions: 318764
Number of successful extensions: 877
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 844
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 877
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -