Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_B19
         (219 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41510-1|ABP49525.1|  327|Caenorhabditis elegans Hypothetical pr...    28   0.78 
U40939-5|AAA81703.3|  343|Caenorhabditis elegans Hypothetical pr...    27   1.4  
U40800-3|AAA81490.1|  467|Caenorhabditis elegans Squashed vulva ...    27   1.4  
U23511-14|AAC46799.1|  357|Caenorhabditis elegans Hypothetical p...    27   1.4  
AY147933-1|AAN39843.1|  467|Caenorhabditis elegans UDP-glucuroni...    27   1.4  
U64862-7|AAB52622.1|  374|Caenorhabditis elegans Hypothetical pr...    27   2.4  
U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical p...    26   3.2  
U28735-9|AAM69113.1| 1299|Caenorhabditis elegans Hypothetical pr...    26   3.2  
Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical pr...    25   5.5  
Z99709-12|CAI79146.1|  349|Caenorhabditis elegans Hypothetical p...    25   7.3  
U58761-4|AAB00715.1|  631|Caenorhabditis elegans Hypothetical pr...    25   7.3  
AF067937-7|AAN84819.1|  392|Caenorhabditis elegans Hypothetical ...    25   7.3  
AF067937-6|AAF99915.1|  426|Caenorhabditis elegans Hypothetical ...    25   7.3  
U41016-10|AAA82321.2| 1656|Caenorhabditis elegans Hypothetical p...    25   9.6  

>U41510-1|ABP49525.1|  327|Caenorhabditis elegans Hypothetical
          protein ZC449.6 protein.
          Length = 327

 Score = 28.3 bits (60), Expect = 0.78
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = +1

Query: 25 VTGGGGFLGARLADYLLEN 81
          +TGGGGFLGA L   L +N
Sbjct: 9  ITGGGGFLGAHLIAALQKN 27


>U40939-5|AAA81703.3|  343|Caenorhabditis elegans Hypothetical
          protein F13D11.4 protein.
          Length = 343

 Score = 27.5 bits (58), Expect = 1.4
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +1

Query: 16 KVTVTGGGGFLGARLADYLLEN 81
          KV VTG  GF+G    + LL+N
Sbjct: 7  KVLVTGASGFIGTHCVEILLKN 28


>U40800-3|AAA81490.1|  467|Caenorhabditis elegans Squashed vulva
           protein 1 protein.
          Length = 467

 Score = 27.5 bits (58), Expect = 1.4
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +1

Query: 16  KVTVTGGGGFLGARLADYLL 75
           ++ +TGG GF+G+ L D L+
Sbjct: 138 RILITGGAGFVGSHLVDKLM 157


>U23511-14|AAC46799.1|  357|Caenorhabditis elegans Hypothetical
          protein C32D5.12 protein.
          Length = 357

 Score = 27.5 bits (58), Expect = 1.4
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +1

Query: 19 VTVTGGGGFLGARLADYLLENE 84
          V VTGG G +G  +   LLENE
Sbjct: 4  VAVTGGAGLVGRYVVQRLLENE 25


>AY147933-1|AAN39843.1|  467|Caenorhabditis elegans UDP-glucuronic
           acid decarboxylase protein.
          Length = 467

 Score = 27.5 bits (58), Expect = 1.4
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +1

Query: 16  KVTVTGGGGFLGARLADYLL 75
           ++ +TGG GF+G+ L D L+
Sbjct: 138 RILITGGAGFVGSHLVDKLM 157


>U64862-7|AAB52622.1|  374|Caenorhabditis elegans Hypothetical
          protein ZC8.1 protein.
          Length = 374

 Score = 26.6 bits (56), Expect = 2.4
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +1

Query: 25 VTGGGGFLGARLADYLLENECPLRV 99
          + GGGGFLGA +   L +  C  R+
Sbjct: 6  IVGGGGFLGAHVISALQKIGCKERI 30


>U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical
           protein F48E3.8a protein.
          Length = 2427

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +1

Query: 82  ECPLRVSALLLTDVHQPTLSPKRHADSRVS 171
           ECP R+SA+    VHQ T +P      +V+
Sbjct: 625 ECPPRMSAIDKKCVHQQTAAPGEPCSEKVA 654


>U28735-9|AAM69113.1| 1299|Caenorhabditis elegans Hypothetical
           protein F48E3.8b protein.
          Length = 1299

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +1

Query: 82  ECPLRVSALLLTDVHQPTLSPKRHADSRVS 171
           ECP R+SA+    VHQ T +P      +V+
Sbjct: 625 ECPPRMSAIDKKCVHQQTAAPGEPCSEKVA 654


>Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical protein
            F18C12.1 protein.
          Length = 4171

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 21/62 (33%), Positives = 31/62 (50%)
 Frame = +1

Query: 7    RNMKVTVTGGGGFLGARLADYLLENECPLRVSALLLTDVHQPTLSPKRHADSRVSTLAAD 186
            R +KV V GG G L     +   +NE  L V ALLL  + + T S     +S +  + ++
Sbjct: 1815 RALKV-VLGGCGALRRTQTN---KNETDLVVQALLLNTLSKLTFSDSERFNSLIDDIFSN 1870

Query: 187  VT 192
            VT
Sbjct: 1871 VT 1872


>Z99709-12|CAI79146.1|  349|Caenorhabditis elegans Hypothetical
           protein C47B2.6b protein.
          Length = 349

 Score = 25.0 bits (52), Expect = 7.3
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
 Frame = +1

Query: 13  MKVTVTGGGGFLGARLADYLLENECPLR-----VSALLLTDVHQPTLSPKRHA 156
           M + VTG  GF+G+     LL +   +       +A+ +TD H   +S KR A
Sbjct: 1   MHILVTGAAGFIGSHTVLELLNSGYTVLCIDNFANAISVTDEHGNAISLKRVA 53


>U58761-4|AAB00715.1|  631|Caenorhabditis elegans Hypothetical
          protein C01F1.3a protein.
          Length = 631

 Score = 25.0 bits (52), Expect = 7.3
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +1

Query: 19 VTVTGGGGFLGARLADYL 72
          V +TGG GF+G+   +Y+
Sbjct: 8  VVITGGCGFIGSNFVNYI 25


>AF067937-7|AAN84819.1|  392|Caenorhabditis elegans Hypothetical
          protein F22F7.1b protein.
          Length = 392

 Score = 25.0 bits (52), Expect = 7.3
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 19 VTVTGGGGFLGARLADYLLENE 84
          V V G  GF GA + +YL+ +E
Sbjct: 6  VVVYGASGFTGAYVVEYLVNSE 27


>AF067937-6|AAF99915.1|  426|Caenorhabditis elegans Hypothetical
          protein F22F7.1a protein.
          Length = 426

 Score = 25.0 bits (52), Expect = 7.3
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 19 VTVTGGGGFLGARLADYLLENE 84
          V V G  GF GA + +YL+ +E
Sbjct: 6  VVVYGASGFTGAYVVEYLVNSE 27


>U41016-10|AAA82321.2| 1656|Caenorhabditis elegans Hypothetical
            protein R11G1.1 protein.
          Length = 1656

 Score = 24.6 bits (51), Expect = 9.6
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +1

Query: 115  TDVHQPTLSPKRHADSRVST 174
            +DV  P LSP RHA   VS+
Sbjct: 1408 SDVDMPRLSPARHAPPVVSS 1427


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.316    0.133    0.378 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,864,033
Number of Sequences: 27780
Number of extensions: 51448
Number of successful extensions: 186
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 186
length of database: 12,740,198
effective HSP length: 52
effective length of database: 11,295,638
effective search space used: 225912760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)