Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_B15
(646 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC644.06c |cdr1|nim1|GIN4 family protein kinase Cdr1|Schizosac... 29 0.43
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 29 0.76
SPBC19C7.06 |||proline-tRNA ligase |Schizosaccharomyces pombe|ch... 28 1.3
SPAC144.07c |||conserved eukaryotic protein|Schizosaccharomyces ... 27 1.8
SPCC1494.05c |ubp12||ubiquitin C-terminal hydrolase Ubp12|Schizo... 27 1.8
SPAC10F6.01c ||SPAC4C5.05c|sulfite reductase beta subunit |Schiz... 27 1.8
SPBC25H2.03 |||vacuolar protein involved in phosphoinositide met... 27 2.3
SPBC15C4.05 |||ATP-dependent RNA/DNA helicase |Schizosaccharomyc... 27 2.3
SPBC3H7.02 |||sulfate transporter |Schizosaccharomyces pombe|chr... 26 5.3
SPBC646.04 |pla1||poly|Schizosaccharomyces pombe|chr 2|||Manual 26 5.3
SPAC30D11.01c ||SPAC56F8.01|alpha-glucosidase|Schizosaccharomyce... 26 5.3
SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1 |Sc... 25 7.1
SPBC16H5.11c |skb1|rmt5|type II protein arginine N-methyltransfe... 25 7.1
SPAC26F1.08c |||conserved protein|Schizosaccharomyces pombe|chr ... 25 9.3
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 25 9.3
SPAC1952.15c |rec24|mug6|meiotic recombination protein Rec24|Sch... 25 9.3
SPBC4C3.12 |sep1||fork head transcription factor Sep1|Schizosacc... 25 9.3
>SPAC644.06c |cdr1|nim1|GIN4 family protein kinase
Cdr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 593
Score = 29.5 bits (63), Expect = 0.43
Identities = 19/57 (33%), Positives = 32/57 (56%)
Frame = +1
Query: 361 YDISNVRPGTVALQSLPSPQLTADTSYQYQPLSIPAYNRFGGDPSYSTNSVSGSSAG 531
Y NVR ++ LQSLP+P L Q S+P +NR+G + + ++S +++G
Sbjct: 443 YSTDNVRTDSLDLQSLPTPTLE-------QLESVP-FNRYGYVRIFPSTTLSSTASG 491
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 28.7 bits (61), Expect = 0.76
Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +1
Query: 238 YEFVTPLTSLVVVKPNE--TNAVNAESVDKPAFQESSFASVPVYDISNVRPGTVALQSLP 411
Y + + + +V+ N+ T+ + E ++PA +++ S+P Y IS+ R T+ L SLP
Sbjct: 483 YGHTSTIRCIKIVQGNQSTTDTDDVEKENRPASNDAN--SMPPYIISSSRDCTIRLWSLP 540
>SPBC19C7.06 |||proline-tRNA ligase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 716
Score = 27.9 bits (59), Expect = 1.3
Identities = 12/40 (30%), Positives = 16/40 (40%)
Frame = +2
Query: 5 QVLGFCGVLDDGYTRRHFYRNGDLQFLVKNMKTSHWSVSG 124
++ GFC L D DL+ K SHW + G
Sbjct: 519 EIEGFCSKLADRLNAADIRTEADLRAYTPGYKFSHWEMKG 558
>SPAC144.07c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 315
Score = 27.5 bits (58), Expect = 1.8
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 326 LFKNLRLHRSLYMIFPTLDQEP*LCNHSQVRN*PQILRTNTNHYLYQPI 472
L K L+ HR Y+IF Q NH+ ++ +I++T Y+P+
Sbjct: 88 LLKELKKHRDSYVIFDCPGQVELFTNHNSLQ---KIIKTLEKELDYRPV 133
>SPCC1494.05c |ubp12||ubiquitin C-terminal hydrolase
Ubp12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 979
Score = 27.5 bits (58), Expect = 1.8
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +1
Query: 238 YEFVTPLTSLVVVKPNETNAVNAESVDKPAFQESSFASVPVYDISN 375
Y F+T L+ ++++ +E + + +++P S VPVY IS+
Sbjct: 558 YRFLTQLSKSLLMEISEEDEIYLYELERPYEDGSDDILVPVYHISD 603
>SPAC10F6.01c ||SPAC4C5.05c|sulfite reductase beta subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1473
Score = 27.5 bits (58), Expect = 1.8
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = +1
Query: 415 PQLTADTSYQYQPLSIPAYNRFGGDPSYSTNSVSGSSAGLMSLKGGYTGHIYLKSIR-RR 591
P+ A TS + LSI + G D + V GS+A ++ K T + + +R R
Sbjct: 238 PERDAATSEYLESLSIKPFEYSGSDDATDVLLVFGSAASELA-KAAVTSSVAVAIVRVLR 296
Query: 592 PVPPVKWPSSTPLTT 636
P P K P +T
Sbjct: 297 PWLPSKLQEVLPTST 311
>SPBC25H2.03 |||vacuolar protein involved in phosphoinositide
metabolism|Schizosaccharomyces pombe|chr 2|||Manual
Length = 811
Score = 27.1 bits (57), Expect = 2.3
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -1
Query: 358 QGPMQTKILEKPVYQQIPRSLHSFHLVSLLPKTSE 254
+GP+ + I + PV +H+F L L+P SE
Sbjct: 177 EGPVSSSIQDVPVMSTEQPRMHTFSLSELVPLLSE 211
>SPBC15C4.05 |||ATP-dependent RNA/DNA helicase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1428
Score = 27.1 bits (57), Expect = 2.3
Identities = 14/62 (22%), Positives = 27/62 (43%)
Frame = +1
Query: 340 SFASVPVYDISNVRPGTVALQSLPSPQLTADTSYQYQPLSIPAYNRFGGDPSYSTNSVSG 519
+F+S+P+ I + + S + SY+ QP + + R +P + N V
Sbjct: 176 AFSSIPIVSIDEYITWMITENLINSEPSNSSFSYEVQPSNYTTFCRMLDEPLPANNPVQS 235
Query: 520 SS 525
+S
Sbjct: 236 NS 237
>SPBC3H7.02 |||sulfate transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 877
Score = 25.8 bits (54), Expect = 5.3
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Frame = +1
Query: 232 LKYEFVTPLTSLVVVKPNETNAVNAESVDKPAFQESSFASVPVYDI----SNVRPGTVAL 399
L Y+F+ +T VV P + ++ SSF V +Y I +V G VA+
Sbjct: 134 LVYDFIAGITVGCVVVPQGMSYAKVATLPAQYGLYSSFVGVAIYCIFATSKDVSIGPVAV 193
Query: 400 QSLPSPQLTAD 432
SL + ++ A+
Sbjct: 194 MSLVTSKVIAN 204
>SPBC646.04 |pla1||poly|Schizosaccharomyces pombe|chr 2|||Manual
Length = 566
Score = 25.8 bits (54), Expect = 5.3
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -3
Query: 422 NCGLGSDCRATVPGLTLEISYTGTD 348
NC + + G+TLE++Y TD
Sbjct: 412 NCSSEEEAQQVASGVTLEVAYESTD 436
>SPAC30D11.01c ||SPAC56F8.01|alpha-glucosidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 993
Score = 25.8 bits (54), Expect = 5.3
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = -3
Query: 539 LIRPALEPDTELVL*EGSPPNLL*AGIDNGWY-WYEVSAVN 420
LI PALEP+T + +G P D WY WY S +N
Sbjct: 806 LISPALEPNTTYI--QGIIP----GDNDTIWYDWYNHSVIN 840
>SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1233
Score = 25.4 bits (53), Expect = 7.1
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 307 ESVDKPAFQESSFASVPVYDISNVRPGTVALQSLPS 414
E +D P +E S S+P+ D+SN G + + PS
Sbjct: 941 EDIDVP-LREGSLTSIPIDDVSN--SGDITMGEEPS 973
>SPBC16H5.11c |skb1|rmt5|type II protein arginine
N-methyltransferase Skb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 645
Score = 25.4 bits (53), Expect = 7.1
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = -1
Query: 607 SQEVLVSVVLISNICALCNLLLNSSDPHLNLIR 509
S+EVL+ ++ C L +++LN +N++R
Sbjct: 110 SEEVLLKEASYASYCGLSSIILNGPTSPMNVMR 142
>SPAC26F1.08c |||conserved protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 977
Score = 25.0 bits (52), Expect = 9.3
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -2
Query: 393 YGSWSNVGNIIYRDRCKRRFLKSRFINRFRVHCIRFI 283
Y + V NI + +LK+ I+ F + CIRFI
Sbjct: 682 YSGIATVFNITFPPILYGSYLKTSTISPFHLACIRFI 718
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 25.0 bits (52), Expect = 9.3
Identities = 13/52 (25%), Positives = 25/52 (48%)
Frame = -1
Query: 298 LHSFHLVSLLPKTSEV*QIHTSELTLKLSFQDCFPYSCLRREYQRHLFRPII 143
L+ + ++ P+ S ++ S+ K SF FP SC + + + P+I
Sbjct: 27 LNDYEILLESPEDSHAYRVSKSKTLEKASFTKVFPPSCTQLDVFSTICAPLI 78
>SPAC1952.15c |rec24|mug6|meiotic recombination protein
Rec24|Schizosaccharomyces pombe|chr 1|||Manual
Length = 350
Score = 25.0 bits (52), Expect = 9.3
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = -2
Query: 129 IRPETLQWEVFMFLTRN*RSPFL 61
+R +TL E+FMFL R+ +SP +
Sbjct: 164 LRIKTLFEEIFMFLKRDCKSPLV 186
>SPBC4C3.12 |sep1||fork head transcription factor
Sep1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 663
Score = 25.0 bits (52), Expect = 9.3
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = +1
Query: 298 VNAESVDKPAFQESSFASVPVYDISNVRPGTVALQSLPSPQLTADTS 438
V+ +D P+ E+ F+ + V + +V + + PSP L++ S
Sbjct: 297 VDTPGIDAPSDLEAKFSDLGVSSVVSVTSPLQSCTNSPSPPLSSPAS 343
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.130 0.395
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,814,331
Number of Sequences: 5004
Number of extensions: 59522
Number of successful extensions: 172
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 172
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 289756512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)
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