Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_B10
         (149 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X55721-1|CAA39253.1|  836|Homo sapiens granulocyte colony stimul...    27   8.0  
X55720-1|CAA39252.1|  783|Homo sapiens granulocyte colony stimul...    27   8.0  
M59820-1|AAA63178.1|  863|Homo sapiens granulocyte colony-stimul...    27   8.0  
M59818-1|AAA63176.1|  836|Homo sapiens granulocyte colony-stimul...    27   8.0  
DQ424902-1|ABD83667.1|  836|Homo sapiens granulocyte colony-stim...    27   8.0  
BC053585-1|AAH53585.1|  836|Homo sapiens colony stimulating fact...    27   8.0  
AY148100-1|AAN05790.1|  836|Homo sapiens colony stimulating fact...    27   8.0  

>X55721-1|CAA39253.1|  836|Homo sapiens granulocyte colony
           stimulating factor  receptor 25-1 protein.
          Length = 836

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = -1

Query: 146 LHTLAQFG-KLAVKFGLFGLLRFIIRHCGCVDLRCPTVRKR-RWP 18
           L TL   G +L +  GLFGLL  +   CG   L C   RK   WP
Sbjct: 616 LMTLTPEGSELHIILGLFGLLLLLTCLCGTAWLCCSPNRKNPLWP 660


>X55720-1|CAA39252.1|  783|Homo sapiens granulocyte colony
           stimulating factor  receptor D-7 protein.
          Length = 783

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = -1

Query: 146 LHTLAQFG-KLAVKFGLFGLLRFIIRHCGCVDLRCPTVRKR-RWP 18
           L TL   G +L +  GLFGLL  +   CG   L C   RK   WP
Sbjct: 616 LMTLTPEGSELHIILGLFGLLLLLTCLCGTAWLCCSPNRKNPLWP 660


>M59820-1|AAA63178.1|  863|Homo sapiens granulocyte
           colony-stimulating factor receptor protein.
          Length = 863

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = -1

Query: 146 LHTLAQFG-KLAVKFGLFGLLRFIIRHCGCVDLRCPTVRKR-RWP 18
           L TL   G +L +  GLFGLL  +   CG   L C   RK   WP
Sbjct: 616 LMTLTPEGSELHIILGLFGLLLLLTCLCGTAWLCCSPNRKNPLWP 660


>M59818-1|AAA63176.1|  836|Homo sapiens granulocyte
           colony-stimulating factor receptor protein.
          Length = 836

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = -1

Query: 146 LHTLAQFG-KLAVKFGLFGLLRFIIRHCGCVDLRCPTVRKR-RWP 18
           L TL   G +L +  GLFGLL  +   CG   L C   RK   WP
Sbjct: 616 LMTLTPEGSELHIILGLFGLLLLLTCLCGTAWLCCSPNRKNPLWP 660


>DQ424902-1|ABD83667.1|  836|Homo sapiens granulocyte
           colony-stimulating factor receptor protein.
          Length = 836

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = -1

Query: 146 LHTLAQFG-KLAVKFGLFGLLRFIIRHCGCVDLRCPTVRKR-RWP 18
           L TL   G +L +  GLFGLL  +   CG   L C   RK   WP
Sbjct: 616 LMTLTPEGSELHIILGLFGLLLLLTCLCGTAWLCCSPNRKNPLWP 660


>BC053585-1|AAH53585.1|  836|Homo sapiens colony stimulating factor
           3 receptor (granulocyte) protein.
          Length = 836

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = -1

Query: 146 LHTLAQFG-KLAVKFGLFGLLRFIIRHCGCVDLRCPTVRKR-RWP 18
           L TL   G +L +  GLFGLL  +   CG   L C   RK   WP
Sbjct: 616 LMTLTPEGSELHIILGLFGLLLLLTCLCGTAWLCCSPNRKNPLWP 660


>AY148100-1|AAN05790.1|  836|Homo sapiens colony stimulating factor
           3 receptor (granulocyte) protein.
          Length = 836

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = -1

Query: 146 LHTLAQFG-KLAVKFGLFGLLRFIIRHCGCVDLRCPTVRKR-RWP 18
           L TL   G +L +  GLFGLL  +   CG   L C   RK   WP
Sbjct: 616 LMTLTPEGSELHIILGLFGLLLLLTCLCGTAWLCCSPNRKNPLWP 660


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,922,261
Number of Sequences: 237096
Number of extensions: 259765
Number of successful extensions: 418
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 418
length of database: 76,859,062
effective HSP length: 30
effective length of database: 69,746,182
effective search space used: 1325177458
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)