Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_B09
         (373 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z32681-6|CAA83605.1|  257|Caenorhabditis elegans Hypothetical pr...   100   3e-22
Z68507-4|CAA92828.2|  414|Caenorhabditis elegans Hypothetical pr...    29   1.1  
U00052-3|AAK21426.1|  308|Caenorhabditis elegans Hypothetical pr...    28   1.9  
Z54342-2|CAA91144.2| 1220|Caenorhabditis elegans Hypothetical pr...    27   4.3  
U13071-1|AAL65794.1|  462|Caenorhabditis elegans Hypothetical pr...    27   5.7  
AC006631-1|AAF39793.2|  787|Caenorhabditis elegans Hypothetical ...    26   9.9  

>Z32681-6|CAA83605.1|  257|Caenorhabditis elegans Hypothetical
           protein F56F3.5 protein.
          Length = 257

 Score =  100 bits (240), Expect = 3e-22
 Identities = 49/110 (44%), Positives = 72/110 (65%)
 Frame = -2

Query: 372 KT*YAQHTQVRAIRKKMWKIITRDVTSSEFREVVNKLIPDSIAKDIEKACHGIYPLRDVC 193
           KT Y + +++R IR +M   I ++VT  + +EVV+KLIPDSI KDIEK C  +YPL++V 
Sbjct: 150 KTSYTKTSKIRKIRSEMIGCIEKEVTGCDLKEVVSKLIPDSIGKDIEKTCSKLYPLQEVY 209

Query: 192 IRKVKVLKSPRFEISKLMXXXXXXXXXXXXXXGDKSERPEGYEPPVQESV 43
           IRKVK++K P+ ++ +L               G+K +RP+ YEPPVQ+ V
Sbjct: 210 IRKVKIIKRPKVDLGRL--HDLHGDSITVGADGEKVDRPDDYEPPVQQEV 257


>Z68507-4|CAA92828.2|  414|Caenorhabditis elegans Hypothetical
           protein M18.6 protein.
          Length = 414

 Score = 29.1 bits (62), Expect = 1.1
 Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 6/39 (15%)
 Frame = +3

Query: 204 EVGRY-RDTPFRYP*RWSPESA-----CSRLHETLNWSH 302
           E+  Y R TP  Y   W PE A     CSR HE L W +
Sbjct: 316 EIRNYDRATPPSYEFTWFPEYAWIIIQCSRCHEHLGWEY 354


>U00052-3|AAK21426.1|  308|Caenorhabditis elegans Hypothetical
           protein K02F3.4 protein.
          Length = 308

 Score = 28.3 bits (60), Expect = 1.9
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 133 QLHQLGDFKTRALQYFHLPNADITKWVDTVT 225
           QLHQ+   +   LQ+ H PN D+   +D  T
Sbjct: 59  QLHQINSAEQSPLQFTHQPNCDLIVVLDEQT 89


>Z54342-2|CAA91144.2| 1220|Caenorhabditis elegans Hypothetical protein
            C08H9.2 protein.
          Length = 1220

 Score = 27.1 bits (57), Expect = 4.3
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -1

Query: 361  RSAYPSPRNQEKNVENHHARCDQFRVS*SREQADSG 254
            R+ Y SPR QE N   HH +    ++  +  Q D G
Sbjct: 1155 RTQYMSPRQQESNNTRHHQQPTSVQMKGAPWQLDLG 1190


>U13071-1|AAL65794.1|  462|Caenorhabditis elegans Hypothetical
           protein T22F7.5 protein.
          Length = 462

 Score = 26.6 bits (56), Expect = 5.7
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -2

Query: 231 KACHGIYPLRDVCIRKVKVLKSPR 160
           K  HG  P +D C+  + + ++PR
Sbjct: 279 KCAHGSSPYKDRCLNNINICEAPR 302


>AC006631-1|AAF39793.2|  787|Caenorhabditis elegans Hypothetical
           protein F27B3.5 protein.
          Length = 787

 Score = 25.8 bits (54), Expect = 9.9
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -2

Query: 324 MWKIITRDVTSSEFREVVNKLIPDSIAKDIE 232
           MWKI   D T  EF+ +V+     +I + +E
Sbjct: 1   MWKIELSDWTDDEFKHIVDFFTNQNILQPLE 31


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,029,625
Number of Sequences: 27780
Number of extensions: 129559
Number of successful extensions: 387
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 379
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 386
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 535612900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)