Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_B09
         (373 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    22   2.7  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    21   4.7  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   4.7  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    20   8.2  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    20   8.2  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    20   8.2  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    20   8.2  

>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 10/27 (37%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
 Frame = +3

Query: 57  PVVRNPLAFLTCLQPLP--VYRCRLHR 131
           P VRN   ++ C +P P  V+   L R
Sbjct: 208 PAVRNEAFYICCEEPYPDIVFNITLRR 234


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 21.0 bits (42), Expect = 4.7
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 343 PRNQEKNVENHH 308
           P+NQ KN  N+H
Sbjct: 111 PKNQYKNQNNNH 122


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.0 bits (42), Expect = 4.7
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = -1

Query: 337 NQEKNVENHHARCDQFRVS*SREQADS 257
           N+EK+  NHH   D  +++    ++D+
Sbjct: 58  NKEKSKNNHHCNQDTEKLNQLEIESDN 84


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 7/17 (41%), Positives = 14/17 (82%)
 Frame = -2

Query: 318 KIITRDVTSSEFREVVN 268
           K ++RD  SS+F+++V+
Sbjct: 312 KNVSRDSNSSDFKKLVD 328


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 140 WSCTVKAAAVNGERLETSQKGQRV 69
           WS TVKAA    +R+   +  ++V
Sbjct: 393 WSATVKAAISEVQRVVLGRLCEKV 416


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 140 WSCTVKAAAVNGERLETSQKGQRV 69
           WS TVKAA    +R+   +  ++V
Sbjct: 431 WSATVKAAISEVQRVVLGRLCEKV 454


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +3

Query: 261 SACSRLHETLNWS 299
           +AC+ L+E + WS
Sbjct: 49  TACAALYERVEWS 61


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,302
Number of Sequences: 438
Number of extensions: 1773
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8928360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)