Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_B07
(582 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK223015-1|BAD96735.1| 365|Homo sapiens actin related protein 2... 173 5e-43
BC054027-1|AAH54027.1| 370|Homo sapiens actin related protein 2... 172 7e-43
BC047889-1|AAH47889.2| 370|Homo sapiens actin related protein 2... 172 7e-43
BC039594-1|AAH39594.2| 370|Homo sapiens actin related protein 2... 172 7e-43
AB209059-1|BAD92296.1| 401|Homo sapiens actin related protein 2... 172 9e-43
Y08999-1|CAA70203.1| 370|Homo sapiens Sop2p-like protein protein. 170 4e-42
BC007555-1|AAH07555.1| 372|Homo sapiens actin related protein 2... 146 4e-35
BC002988-1|AAH02988.2| 372|Homo sapiens actin related protein 2... 146 4e-35
BC002562-1|AAH02562.1| 372|Homo sapiens actin related protein 2... 146 4e-35
AF006084-1|AAB64189.1| 372|Homo sapiens p41-Arc protein. 146 4e-35
BC139834-1|AAI39835.1| 415|Homo sapiens WDR32 protein protein. 30 6.8
BC108686-1|AAI08687.1| 412|Homo sapiens WDR32 protein protein. 30 6.8
BC022967-1|AAH22967.1| 326|Homo sapiens WDR22 protein protein. 30 6.8
BC011959-1|AAH11959.2| 320|Homo sapiens WDR32 protein protein. 30 6.8
AL138752-6|CAI13878.1| 559|Homo sapiens WD repeat domain 32 pro... 30 6.8
AK074532-1|BAC11043.1| 412|Homo sapiens protein ( Homo sapiens ... 30 6.8
AB058727-1|BAB47453.1| 958|Homo sapiens KIAA1824 protein protein. 30 6.8
>AK223015-1|BAD96735.1| 365|Homo sapiens actin related protein 2/3
complex subunit 1A variant protein.
Length = 365
Score = 173 bits (420), Expect = 5e-43
Identities = 77/191 (40%), Positives = 127/191 (66%), Gaps = 1/191 (0%)
Frame = +1
Query: 1 QPGPNVWGTKLPLGQLLAEFPNXXXXXXXXXXXXXXDDGSKVAWVAHDSSINIADSSQGK 180
+P WG+K+P GQL++EF GS++AWV+HDS++++AD+S+
Sbjct: 174 KPASTPWGSKMPFGQLMSEFGGSGTGGWVHGVSFSAS-GSRLAWVSHDSTVSVADASKSV 232
Query: 181 TVVKLKTEYLPFLGCSWVTNNSLVVAGHSCIPLLYTHEDNE-IKFIAKLDNTQRKESGGL 357
V LKTE+LP L S+V+ NS+V AGH C P+L+ ++D+ + F++KLD ++ +
Sbjct: 233 QVSTLKTEFLPLLSVSFVSENSVVAAGHDCCPMLFNYDDHGCLTFVSKLDIPKQSIQRNM 292
Query: 358 SAMKKFQSLDRHARIETNDTFLDSIHQNAISCISIYKGTKANTRKFSTSGLDGQLVIWDI 537
SAM++F+++D+ A E +T L+++HQN+I+ +SIY+ K + RKF T+G+DG + IWD
Sbjct: 293 SAMERFRNMDKRATTEDRNTALETLHQNSITQVSIYEVDKQDCRKFCTTGIDGAMTIWDF 352
Query: 538 ETLEKSFERLK 570
+TLE S + L+
Sbjct: 353 KTLESSIQGLR 363
>BC054027-1|AAH54027.1| 370|Homo sapiens actin related protein 2/3
complex, subunit 1A, 41kDa protein.
Length = 370
Score = 172 bits (419), Expect = 7e-43
Identities = 77/191 (40%), Positives = 126/191 (65%), Gaps = 1/191 (0%)
Frame = +1
Query: 1 QPGPNVWGTKLPLGQLLAEFPNXXXXXXXXXXXXXXDDGSKVAWVAHDSSINIADSSQGK 180
+P WG+K+P GQL++EF GS++AWV+HDS++++AD+S+
Sbjct: 179 KPASTPWGSKMPFGQLMSEFGGSGTGGWVHGVSFSAS-GSRLAWVSHDSTVSVADASKSV 237
Query: 181 TVVKLKTEYLPFLGCSWVTNNSLVVAGHSCIPLLYTHEDNE-IKFIAKLDNTQRKESGGL 357
V LKTE+LP L S+V+ NS+V AGH C P+L+ ++D + F++KLD ++ +
Sbjct: 238 QVSTLKTEFLPLLSVSFVSENSVVAAGHDCCPMLFNYDDRGCLTFVSKLDIPKQSIQRNM 297
Query: 358 SAMKKFQSLDRHARIETNDTFLDSIHQNAISCISIYKGTKANTRKFSTSGLDGQLVIWDI 537
SAM++F+++D+ A E +T L+++HQN+I+ +SIY+ K + RKF T+G+DG + IWD
Sbjct: 298 SAMERFRNMDKRATTEDRNTALETLHQNSITQVSIYEVDKQDCRKFCTTGIDGAMTIWDF 357
Query: 538 ETLEKSFERLK 570
+TLE S + L+
Sbjct: 358 KTLESSIQGLR 368
>BC047889-1|AAH47889.2| 370|Homo sapiens actin related protein 2/3
complex, subunit 1A, 41kDa protein.
Length = 370
Score = 172 bits (419), Expect = 7e-43
Identities = 77/191 (40%), Positives = 126/191 (65%), Gaps = 1/191 (0%)
Frame = +1
Query: 1 QPGPNVWGTKLPLGQLLAEFPNXXXXXXXXXXXXXXDDGSKVAWVAHDSSINIADSSQGK 180
+P WG+K+P GQL++EF GS++AWV+HDS++++AD+S+
Sbjct: 179 KPASTPWGSKMPFGQLMSEFGGSGTGGWVHGVSFSAS-GSRLAWVSHDSTVSVADASKSV 237
Query: 181 TVVKLKTEYLPFLGCSWVTNNSLVVAGHSCIPLLYTHEDNE-IKFIAKLDNTQRKESGGL 357
V LKTE+LP L S+V+ NS+V AGH C P+L+ ++D + F++KLD ++ +
Sbjct: 238 QVSTLKTEFLPLLSVSFVSENSVVAAGHDCCPMLFNYDDRGCLTFVSKLDIPKQSIQRNM 297
Query: 358 SAMKKFQSLDRHARIETNDTFLDSIHQNAISCISIYKGTKANTRKFSTSGLDGQLVIWDI 537
SAM++F+++D+ A E +T L+++HQN+I+ +SIY+ K + RKF T+G+DG + IWD
Sbjct: 298 SAMERFRNMDKRATTEDRNTALETLHQNSITQVSIYEVDKQDCRKFCTTGIDGAMTIWDF 357
Query: 538 ETLEKSFERLK 570
+TLE S + L+
Sbjct: 358 KTLESSIQGLR 368
>BC039594-1|AAH39594.2| 370|Homo sapiens actin related protein 2/3
complex, subunit 1A, 41kDa protein.
Length = 370
Score = 172 bits (419), Expect = 7e-43
Identities = 77/191 (40%), Positives = 126/191 (65%), Gaps = 1/191 (0%)
Frame = +1
Query: 1 QPGPNVWGTKLPLGQLLAEFPNXXXXXXXXXXXXXXDDGSKVAWVAHDSSINIADSSQGK 180
+P WG+K+P GQL++EF GS++AWV+HDS++++AD+S+
Sbjct: 179 KPASTPWGSKMPFGQLMSEFGGSGTGGWVHGVSFSAS-GSRLAWVSHDSTVSVADASKSV 237
Query: 181 TVVKLKTEYLPFLGCSWVTNNSLVVAGHSCIPLLYTHEDNE-IKFIAKLDNTQRKESGGL 357
V LKTE+LP L S+V+ NS+V AGH C P+L+ ++D + F++KLD ++ +
Sbjct: 238 QVSTLKTEFLPLLSVSFVSENSVVAAGHDCCPMLFNYDDRGCLTFVSKLDIPKQSIQRNM 297
Query: 358 SAMKKFQSLDRHARIETNDTFLDSIHQNAISCISIYKGTKANTRKFSTSGLDGQLVIWDI 537
SAM++F+++D+ A E +T L+++HQN+I+ +SIY+ K + RKF T+G+DG + IWD
Sbjct: 298 SAMERFRNMDKRATTEDRNTALETLHQNSITQVSIYEVDKQDCRKFCTTGIDGAMTIWDF 357
Query: 538 ETLEKSFERLK 570
+TLE S + L+
Sbjct: 358 KTLESSIQGLR 368
>AB209059-1|BAD92296.1| 401|Homo sapiens actin related protein 2/3
complex subunit 1A variant protein.
Length = 401
Score = 172 bits (418), Expect = 9e-43
Identities = 77/191 (40%), Positives = 126/191 (65%), Gaps = 1/191 (0%)
Frame = +1
Query: 1 QPGPNVWGTKLPLGQLLAEFPNXXXXXXXXXXXXXXDDGSKVAWVAHDSSINIADSSQGK 180
+P WG+K+P GQL++EF GS++AWV+HDS++++AD+S+
Sbjct: 210 KPASTPWGSKMPFGQLMSEFGGSGTGGWVHGVSFSAS-GSRLAWVSHDSTVSVADASKSV 268
Query: 181 TVVKLKTEYLPFLGCSWVTNNSLVVAGHSCIPLLYTHEDNE-IKFIAKLDNTQRKESGGL 357
V LKTE+LP L S+V+ NS+V AGH C P+L+ ++D + F++KLD ++ +
Sbjct: 269 QVSTLKTEFLPLLSVSFVSENSVVAAGHDCCPMLFNYDDRGCLTFVSKLDIPKQSIQRNM 328
Query: 358 SAMKKFQSLDRHARIETNDTFLDSIHQNAISCISIYKGTKANTRKFSTSGLDGQLVIWDI 537
SAM++F+++D+ A E +T L+++HQN+I+ +SIY+ K + RKF T+G+DG + IWD
Sbjct: 329 SAMERFRNMDKRATTEDRNTALETLHQNSITQVSIYEVDKQDCRKFCTTGIDGAMTIWDF 388
Query: 538 ETLEKSFERLK 570
+TLE S + L+
Sbjct: 389 KTLESSIQCLR 399
>Y08999-1|CAA70203.1| 370|Homo sapiens Sop2p-like protein protein.
Length = 370
Score = 170 bits (413), Expect = 4e-42
Identities = 76/185 (41%), Positives = 124/185 (67%), Gaps = 1/185 (0%)
Frame = +1
Query: 19 WGTKLPLGQLLAEFPNXXXXXXXXXXXXXXDDGSKVAWVAHDSSINIADSSQGKTVVKLK 198
WG+K+P GQL++EF GS++AWV+HDS++++AD+S+ V LK
Sbjct: 185 WGSKMPFGQLMSEFGGSGTGGWVHGVSFSAS-GSRLAWVSHDSTVSVADASKSVQVSTLK 243
Query: 199 TEYLPFLGCSWVTNNSLVVAGHSCIPLLYTHEDNE-IKFIAKLDNTQRKESGGLSAMKKF 375
TE+LP L S+V+ NS+V AGH C P+L+ ++D + F++KLD ++ +SAM++F
Sbjct: 244 TEFLPLLSVSFVSENSVVAAGHDCCPMLFIYDDRGCLTFVSKLDIPKQSIQRNMSAMERF 303
Query: 376 QSLDRHARIETNDTFLDSIHQNAISCISIYKGTKANTRKFSTSGLDGQLVIWDIETLEKS 555
+++D+ A E +T L+++HQN+I+ +SIY+ K + RKF T+G+DG + IWD +TLE S
Sbjct: 304 RNMDKRATTEDRNTALETLHQNSITQVSIYEVDKQDCRKFCTTGIDGAMTIWDFKTLESS 363
Query: 556 FERLK 570
+ L+
Sbjct: 364 IQGLR 368
>BC007555-1|AAH07555.1| 372|Homo sapiens actin related protein 2/3
complex, subunit 1B, 41kDa protein.
Length = 372
Score = 146 bits (355), Expect = 4e-35
Identities = 73/195 (37%), Positives = 118/195 (60%), Gaps = 5/195 (2%)
Frame = +1
Query: 1 QPGPNVWGTKLPLGQLLAEFPNXXXXXXXXXXXXXXDDGSKVAWVAHDSSINIADSSQGK 180
+P P WG+K+P G+L+ E + GS+VAWV+HDS++ +AD+ +
Sbjct: 179 RPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSAS---GSRVAWVSHDSTVCLADADKKM 235
Query: 181 TVVKLKTEYLPFLGCSWVTNNSLVVAGHSCIPLLYTHE--DNEIKFIAKLDNTQRKESGG 354
V L +E LP L +++T+NSLV AGH C P+L+T++ + F +LD ++ G
Sbjct: 236 AVATLASETLPLLALTFITDNSLVAAGHDCFPVLFTYDAAAGMLSFGGRLDVPKQSSQRG 295
Query: 355 LSAMKKFQSLDRHARIETNDTF---LDSIHQNAISCISIYKGTKANTRKFSTSGLDGQLV 525
L+A ++FQ+LD+ A E LDS+H+N++S IS+ G KA +F T+G+DG +
Sbjct: 296 LTARERFQNLDKKASSEGGTAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMS 355
Query: 526 IWDIETLEKSFERLK 570
IWD+++LE + + LK
Sbjct: 356 IWDVKSLESALKDLK 370
>BC002988-1|AAH02988.2| 372|Homo sapiens actin related protein 2/3
complex, subunit 1B, 41kDa protein.
Length = 372
Score = 146 bits (355), Expect = 4e-35
Identities = 73/195 (37%), Positives = 118/195 (60%), Gaps = 5/195 (2%)
Frame = +1
Query: 1 QPGPNVWGTKLPLGQLLAEFPNXXXXXXXXXXXXXXDDGSKVAWVAHDSSINIADSSQGK 180
+P P WG+K+P G+L+ E + GS+VAWV+HDS++ +AD+ +
Sbjct: 179 RPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSAS---GSRVAWVSHDSTVCLADADKKM 235
Query: 181 TVVKLKTEYLPFLGCSWVTNNSLVVAGHSCIPLLYTHE--DNEIKFIAKLDNTQRKESGG 354
V L +E LP L +++T+NSLV AGH C P+L+T++ + F +LD ++ G
Sbjct: 236 AVATLASETLPLLALTFITDNSLVAAGHDCFPVLFTYDAAAGMLSFGGRLDVPKQSSQRG 295
Query: 355 LSAMKKFQSLDRHARIETNDTF---LDSIHQNAISCISIYKGTKANTRKFSTSGLDGQLV 525
L+A ++FQ+LD+ A E LDS+H+N++S IS+ G KA +F T+G+DG +
Sbjct: 296 LTARERFQNLDKKASSEGGTAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMS 355
Query: 526 IWDIETLEKSFERLK 570
IWD+++LE + + LK
Sbjct: 356 IWDVKSLESALKDLK 370
>BC002562-1|AAH02562.1| 372|Homo sapiens actin related protein 2/3
complex, subunit 1B, 41kDa protein.
Length = 372
Score = 146 bits (355), Expect = 4e-35
Identities = 73/195 (37%), Positives = 118/195 (60%), Gaps = 5/195 (2%)
Frame = +1
Query: 1 QPGPNVWGTKLPLGQLLAEFPNXXXXXXXXXXXXXXDDGSKVAWVAHDSSINIADSSQGK 180
+P P WG+K+P G+L+ E + GS+VAWV+HDS++ +AD+ +
Sbjct: 179 RPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSAS---GSRVAWVSHDSTVCLADADKKM 235
Query: 181 TVVKLKTEYLPFLGCSWVTNNSLVVAGHSCIPLLYTHE--DNEIKFIAKLDNTQRKESGG 354
V L +E LP L +++T+NSLV AGH C P+L+T++ + F +LD ++ G
Sbjct: 236 AVATLASETLPLLALTFITDNSLVAAGHDCFPVLFTYDAAAGMLSFGGRLDVPKQSSQRG 295
Query: 355 LSAMKKFQSLDRHARIETNDTF---LDSIHQNAISCISIYKGTKANTRKFSTSGLDGQLV 525
L+A ++FQ+LD+ A E LDS+H+N++S IS+ G KA +F T+G+DG +
Sbjct: 296 LTARERFQNLDKKASSEGGTAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMS 355
Query: 526 IWDIETLEKSFERLK 570
IWD+++LE + + LK
Sbjct: 356 IWDVKSLESALKDLK 370
>AF006084-1|AAB64189.1| 372|Homo sapiens p41-Arc protein.
Length = 372
Score = 146 bits (355), Expect = 4e-35
Identities = 73/195 (37%), Positives = 118/195 (60%), Gaps = 5/195 (2%)
Frame = +1
Query: 1 QPGPNVWGTKLPLGQLLAEFPNXXXXXXXXXXXXXXDDGSKVAWVAHDSSINIADSSQGK 180
+P P WG+K+P G+L+ E + GS+VAWV+HDS++ +AD+ +
Sbjct: 179 RPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSAS---GSRVAWVSHDSTVCLADADKKM 235
Query: 181 TVVKLKTEYLPFLGCSWVTNNSLVVAGHSCIPLLYTHE--DNEIKFIAKLDNTQRKESGG 354
V L +E LP L +++T+NSLV AGH C P+L+T++ + F +LD ++ G
Sbjct: 236 AVATLASETLPLLALTFITDNSLVAAGHDCFPVLFTYDAAAGMLSFGGRLDVPKQSSQRG 295
Query: 355 LSAMKKFQSLDRHARIETNDTF---LDSIHQNAISCISIYKGTKANTRKFSTSGLDGQLV 525
L+A ++FQ+LD+ A E LDS+H+N++S IS+ G KA +F T+G+DG +
Sbjct: 296 LTARERFQNLDKKASSEGGTAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMS 355
Query: 526 IWDIETLEKSFERLK 570
IWD+++LE + + LK
Sbjct: 356 IWDVKSLESALKDLK 370
>BC139834-1|AAI39835.1| 415|Homo sapiens WDR32 protein protein.
Length = 415
Score = 29.9 bits (64), Expect = 6.8
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 481 NTRKFSTSGLDGQLVIWD 534
NTR TSG DG ++IWD
Sbjct: 120 NTRLLVTSGFDGNVIIWD 137
>BC108686-1|AAI08687.1| 412|Homo sapiens WDR32 protein protein.
Length = 412
Score = 29.9 bits (64), Expect = 6.8
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 481 NTRKFSTSGLDGQLVIWD 534
NTR TSG DG ++IWD
Sbjct: 117 NTRLLVTSGFDGNVIIWD 134
>BC022967-1|AAH22967.1| 326|Homo sapiens WDR22 protein protein.
Length = 326
Score = 29.9 bits (64), Expect = 6.8
Identities = 14/46 (30%), Positives = 29/46 (63%)
Frame = +1
Query: 400 IETNDTFLDSIHQNAISCISIYKGTKANTRKFSTSGLDGQLVIWDI 537
+E+++T H++A+ +S+ + N F++S DG+++IWDI
Sbjct: 130 VESSETLDVFAHEDAVYGLSV---SPVNDNIFASSSDDGRVLIWDI 172
>BC011959-1|AAH11959.2| 320|Homo sapiens WDR32 protein protein.
Length = 320
Score = 29.9 bits (64), Expect = 6.8
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 481 NTRKFSTSGLDGQLVIWD 534
NTR TSG DG ++IWD
Sbjct: 25 NTRLLVTSGFDGNVIIWD 42
>AL138752-6|CAI13878.1| 559|Homo sapiens WD repeat domain 32
protein.
Length = 559
Score = 29.9 bits (64), Expect = 6.8
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 481 NTRKFSTSGLDGQLVIWD 534
NTR TSG DG ++IWD
Sbjct: 264 NTRLLVTSGFDGNVIIWD 281
>AK074532-1|BAC11043.1| 412|Homo sapiens protein ( Homo sapiens
cDNA FLJ90051 fis, clone HEMBA1002551, weakly similar to
PUTATIVE SERINE/THREONINE-PROTEIN KINASE PKWA (EC
2.7.1.-). ).
Length = 412
Score = 29.9 bits (64), Expect = 6.8
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 481 NTRKFSTSGLDGQLVIWD 534
NTR TSG DG ++IWD
Sbjct: 117 NTRLLVTSGFDGNVIIWD 134
>AB058727-1|BAB47453.1| 958|Homo sapiens KIAA1824 protein protein.
Length = 958
Score = 29.9 bits (64), Expect = 6.8
Identities = 14/46 (30%), Positives = 29/46 (63%)
Frame = +1
Query: 400 IETNDTFLDSIHQNAISCISIYKGTKANTRKFSTSGLDGQLVIWDI 537
+E+++T H++A+ +S+ + N F++S DG+++IWDI
Sbjct: 146 VESSETLDVFAHEDAVYGLSV---SPVNDNIFASSSDDGRVLIWDI 188
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,812,643
Number of Sequences: 237096
Number of extensions: 1818905
Number of successful extensions: 5068
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 4344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5044
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6042162242
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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