Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_B07
         (582 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL110501-4|CAB54510.1|  368|Caenorhabditis elegans Hypothetical ...   128   2e-30
AC006794-2|AAK68505.2|  622|Caenorhabditis elegans Hypothetical ...    35   0.037
U23139-7|AAK31492.1|  929|Caenorhabditis elegans Hypothetical pr...    32   0.34 
Z92811-3|CAB07274.1| 1083|Caenorhabditis elegans Hypothetical pr...    31   0.60 
Z92789-9|CAB07223.1| 1083|Caenorhabditis elegans Hypothetical pr...    31   0.60 
AC024753-2|AAF60457.2|  561|Caenorhabditis elegans Hypothetical ...    30   1.0  
Z79639-1|CAB01916.1| 2948|Caenorhabditis elegans Hypothetical pr...    29   2.4  
AC025723-4|AAK29933.2| 1335|Caenorhabditis elegans Rab connectin...    29   2.4  
Z99278-1|CAB16490.1|  793|Caenorhabditis elegans Hypothetical pr...    28   5.6  
Z46934-12|CAA87044.3|  539|Caenorhabditis elegans Hypothetical p...    28   5.6  
AL132904-13|CAC35846.4|  778|Caenorhabditis elegans Hypothetical...    27   7.4  
Z72502-4|CAA96589.1|  750|Caenorhabditis elegans Hypothetical pr...    27   9.7  
Z66497-11|CAH19102.1|  238|Caenorhabditis elegans Hypothetical p...    27   9.7  
Z66497-10|CAH19101.1|  346|Caenorhabditis elegans Hypothetical p...    27   9.7  
Z66497-3|CAE48503.1|  363|Caenorhabditis elegans Hypothetical pr...    27   9.7  
Z66497-2|CAD59153.1|  336|Caenorhabditis elegans Hypothetical pr...    27   9.7  
Z66497-1|CAA91283.1|  521|Caenorhabditis elegans Hypothetical pr...    27   9.7  
AC025721-7|AAK29911.3|  668|Caenorhabditis elegans Half transpor...    27   9.7  

>AL110501-4|CAB54510.1|  368|Caenorhabditis elegans Hypothetical
           protein Y79H2A.6 protein.
          Length = 368

 Score =  128 bits (310), Expect = 2e-30
 Identities = 65/182 (35%), Positives = 104/182 (57%), Gaps = 2/182 (1%)
 Frame = +1

Query: 1   QPGPNVWGTKLPLGQLLAEFPNXXXXXXXXXXXXXXDDGSKVAWVAHDSSINIADSS-QG 177
           +P PN WG K+P GQL++E+                  G ++A+V+HDSS++  DS+   
Sbjct: 185 KPSPNPWGQKMPFGQLMSEY----SVGGWVHRVAFSPSGCRLAFVSHDSSVSFVDSTVDS 240

Query: 178 KTVVKLKTEYLPFLGCSWVTNNSLVVAGHSCIPLLYTHEDNEIKFIAKLDNTQRKESGGL 357
           + V  L T +LPF    W+T NS+V AGH C P+L+    + +K + KLD     +S  +
Sbjct: 241 QKVQNLLTIHLPFTTVEWITENSVVTAGHDCSPVLFVVSQDVLKEVCKLDVPSAAKSSTV 300

Query: 358 -SAMKKFQSLDRHARIETNDTFLDSIHQNAISCISIYKGTKANTRKFSTSGLDGQLVIWD 534
            SA++ F+++DR+   E  +  L ++HQN I+ I  + GT  N  KF+T G DG + +WD
Sbjct: 301 NSALQLFKNIDRNNAAEKINVALKTLHQNRITQILPHSGTVGNVVKFTTCGTDGIVALWD 360

Query: 535 IE 540
           ++
Sbjct: 361 LK 362


>AC006794-2|AAK68505.2|  622|Caenorhabditis elegans Hypothetical
           protein Y50D4A.4 protein.
          Length = 622

 Score = 35.1 bits (77), Expect = 0.037
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +1

Query: 211 PFLGCSWVTNNSLVVAGHSCIPLLYTHEDNEIKFIAKLDN 330
           P L   WVTNN L++  +    LLY +ED +   + K  N
Sbjct: 76  PLLAVEWVTNNQLLLVNNHSAELLYINEDKKSSKLLKATN 115


>U23139-7|AAK31492.1|  929|Caenorhabditis elegans Hypothetical
           protein F13H8.2 protein.
          Length = 929

 Score = 31.9 bits (69), Expect = 0.34
 Identities = 15/45 (33%), Positives = 26/45 (57%)
 Frame = +1

Query: 403 ETNDTFLDSIHQNAISCISIYKGTKANTRKFSTSGLDGQLVIWDI 537
           E ++  + S H+ A++CI       ++   F+T G DG +V+WDI
Sbjct: 92  EDSEPIMFSGHKKAVNCIEF----SSDGLLFATGGKDGVIVLWDI 132


>Z92811-3|CAB07274.1| 1083|Caenorhabditis elegans Hypothetical
           protein T01G1.3 protein.
          Length = 1083

 Score = 31.1 bits (67), Expect = 0.60
 Identities = 14/25 (56%), Positives = 18/25 (72%)
 Frame = +1

Query: 475 KANTRKFSTSGLDGQLVIWDIETLE 549
           KA+ R   +SG DGQ+VIW+ ET E
Sbjct: 266 KADDRLVISSGCDGQVVIWNHETSE 290


>Z92789-9|CAB07223.1| 1083|Caenorhabditis elegans Hypothetical
           protein T01G1.3 protein.
          Length = 1083

 Score = 31.1 bits (67), Expect = 0.60
 Identities = 14/25 (56%), Positives = 18/25 (72%)
 Frame = +1

Query: 475 KANTRKFSTSGLDGQLVIWDIETLE 549
           KA+ R   +SG DGQ+VIW+ ET E
Sbjct: 266 KADDRLVISSGCDGQVVIWNHETSE 290


>AC024753-2|AAF60457.2|  561|Caenorhabditis elegans Hypothetical
           protein Y23H5B.5 protein.
          Length = 561

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = +1

Query: 433 HQNAISCISIYKGTKANTRKFSTSGLDGQLVIWDIETLEKSFE 561
           H++AI C ++   +  N     T G D ++ +WDI + EKS E
Sbjct: 176 HEDAIRCGAV---SSINDHIVLTGGYDHKVRLWDIRSKEKSLE 215


>Z79639-1|CAB01916.1| 2948|Caenorhabditis elegans Hypothetical
           protein F54E4.1 protein.
          Length = 2948

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +1

Query: 454 ISIYKGTKANTRKFSTSGLDGQLVIWDIETLEKSFER 564
           I + + TK+N   FS   +DG L+ W +E L+  F +
Sbjct: 510 ILLRQWTKSNDVLFSIHPVDGSLLTWTVEWLDDHFRQ 546


>AC025723-4|AAK29933.2| 1335|Caenorhabditis elegans Rab connectin
           related protein 2 protein.
          Length = 1335

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +1

Query: 433 HQNAISCISIYKGTKANTRKFSTSGLDGQLVIWDIE 540
           H   I+ IS    T  NTR F ++  DG++ +W+I+
Sbjct: 69  HSQKITAISQTTNTPTNTR-FVSASADGRVCLWEIQ 103


>Z99278-1|CAB16490.1|  793|Caenorhabditis elegans Hypothetical
           protein Y53C12B.1 protein.
          Length = 793

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +1

Query: 481 NTRKFSTSGLDGQLVIWDIETLEK 552
           N  +F T+G DG++V+W   T EK
Sbjct: 618 NESEFVTAGTDGRIVVWKDVTEEK 641


>Z46934-12|CAA87044.3|  539|Caenorhabditis elegans Hypothetical
           protein ZK1320.6 protein.
          Length = 539

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +2

Query: 38  WVNYWLNFRILYQVVDGYIAYRF 106
           W +Y+ N + ++ V+DGY   RF
Sbjct: 433 WKHYYSNAQAIFYVIDGYAVERF 455


>AL132904-13|CAC35846.4|  778|Caenorhabditis elegans Hypothetical
           protein Y111B2A.17 protein.
          Length = 778

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 10/35 (28%), Positives = 20/35 (57%)
 Frame = +1

Query: 433 HQNAISCISIYKGTKANTRKFSTSGLDGQLVIWDI 537
           HQ  I+ +   K ++    +F T G+D ++V+W +
Sbjct: 59  HQKPITVLKRLKSSEIVADEFVTGGVDSRVVLWKL 93


>Z72502-4|CAA96589.1|  750|Caenorhabditis elegans Hypothetical
           protein C08B6.7 protein.
          Length = 750

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 13/50 (26%), Positives = 24/50 (48%)
 Frame = +1

Query: 112 DGSKVAWVAHDSSINIADSSQGKTVVKLKTEYLPFLGCSWVTNNSLVVAG 261
           DG  +A V+HD  + I +    + +  +K+ +   L  SW  +  L+  G
Sbjct: 316 DGKMMATVSHDGFLRIFNYHAQELLAVMKSYFGGLLTLSWSPDAKLIATG 365


>Z66497-11|CAH19102.1|  238|Caenorhabditis elegans Hypothetical
           protein K08F8.1e protein.
          Length = 238

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 15/51 (29%), Positives = 27/51 (52%)
 Frame = +1

Query: 337 RKESGGLSAMKKFQSLDRHARIETNDTFLDSIHQNAISCISIYKGTKANTR 489
           +K +G   A+K  +   + AR E    +L + H+N +S + IY+ T  N +
Sbjct: 5   QKVTGEKFALKVLRDSQK-ARREVELHWLTNAHENVVSILDIYENTFDNVK 54


>Z66497-10|CAH19101.1|  346|Caenorhabditis elegans Hypothetical
           protein K08F8.1d protein.
          Length = 346

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 15/51 (29%), Positives = 27/51 (52%)
 Frame = +1

Query: 337 RKESGGLSAMKKFQSLDRHARIETNDTFLDSIHQNAISCISIYKGTKANTR 489
           +K +G   A+K  +   + AR E    +L + H+N +S + IY+ T  N +
Sbjct: 113 QKVTGEKFALKVLRDSQK-ARREVELHWLTNAHENVVSILDIYENTFDNVK 162


>Z66497-3|CAE48503.1|  363|Caenorhabditis elegans Hypothetical
           protein K08F8.1c protein.
          Length = 363

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 15/51 (29%), Positives = 27/51 (52%)
 Frame = +1

Query: 337 RKESGGLSAMKKFQSLDRHARIETNDTFLDSIHQNAISCISIYKGTKANTR 489
           +K +G   A+K  +   + AR E    +L + H+N +S + IY+ T  N +
Sbjct: 5   QKVTGEKFALKVLRDSQK-ARREVELHWLTNAHENVVSILDIYENTFDNVK 54


>Z66497-2|CAD59153.1|  336|Caenorhabditis elegans Hypothetical
           protein K08F8.1b protein.
          Length = 336

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 15/51 (29%), Positives = 27/51 (52%)
 Frame = +1

Query: 337 RKESGGLSAMKKFQSLDRHARIETNDTFLDSIHQNAISCISIYKGTKANTR 489
           +K +G   A+K  +   + AR E    +L + H+N +S + IY+ T  N +
Sbjct: 163 QKVTGEKFALKVLRDSQK-ARREVELHWLTNAHENVVSILDIYENTFDNVK 212


>Z66497-1|CAA91283.1|  521|Caenorhabditis elegans Hypothetical
           protein K08F8.1a protein.
          Length = 521

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 15/51 (29%), Positives = 27/51 (52%)
 Frame = +1

Query: 337 RKESGGLSAMKKFQSLDRHARIETNDTFLDSIHQNAISCISIYKGTKANTR 489
           +K +G   A+K  +   + AR E    +L + H+N +S + IY+ T  N +
Sbjct: 163 QKVTGEKFALKVLRDSQK-ARREVELHWLTNAHENVVSILDIYENTFDNVK 212


>AC025721-7|AAK29911.3|  668|Caenorhabditis elegans Half transporter
           (pgp related)protein 6 protein.
          Length = 668

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 10/22 (45%), Positives = 17/22 (77%)
 Frame = -1

Query: 159 YVDRTVMRYPSNFTSVIGKRYA 94
           +VD  V R+PS +++V+G+R A
Sbjct: 542 HVDEFVSRFPSGYSTVVGERGA 563


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,274,441
Number of Sequences: 27780
Number of extensions: 301959
Number of successful extensions: 781
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 778
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)