Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_B06
(643 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC685.07c |rpl2701|rpl27-1|60S ribosomal protein L27|Schizosac... 155 7e-39
SPCC74.05 |rpl2702|rpl27-2|60S ribosomal protein L27|Schizosacch... 152 4e-38
SPAC3H1.12c |snt2||Lid2 complex subunit Snt2 |Schizosaccharomyce... 28 1.3
SPAC26A3.10 |||Arf GAP protein|Schizosaccharomyces pombe|chr 1||... 28 1.3
SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase Abc... 28 1.3
SPAC1805.13 |rpl14||60S ribosomal protein L14|Schizosaccharomyce... 27 1.7
SPCC622.18 |rpl6||60S ribosomal protein L6|Schizosaccharomyces p... 27 1.7
SPCC1281.06c |||acyl-coA desaturase |Schizosaccharomyces pombe|c... 27 3.0
SPCC31H12.02c |mug73||membrane transporter |Schizosaccharomyces ... 26 5.3
SPAC26H5.02c |||DNA replication ATPase|Schizosaccharomyces pombe... 26 5.3
SPAC328.01c ||SPAC3A11.01|karyopherin|Schizosaccharomyces pombe|... 25 7.0
SPBC2F12.08c |ceg1|pce1|mRNA guanylyltransferase Ceg1|Schizosacc... 25 7.0
SPAC144.08 |||DNAJ domain protein Jac1 |Schizosaccharomyces pomb... 25 7.0
SPBP23A10.09 |||GINS complex subunit Psf1 |Schizosaccharomyces p... 25 7.0
SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizo... 25 7.0
SPAC25G10.04c |rec10|rec20|meiotic recombination protein Rec10 |... 25 9.3
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 25 9.3
SPAC57A7.05 |||conserved protein |Schizosaccharomyces pombe|chr ... 25 9.3
SPBC211.03c |||guanyl-nucleotide exchange factor|Schizosaccharom... 25 9.3
SPBC365.09c |||human KIN homolog|Schizosaccharomyces pombe|chr 2... 25 9.3
>SPBC685.07c |rpl2701|rpl27-1|60S ribosomal protein
L27|Schizosaccharomyces pombe|chr 2|||Manual
Length = 136
Score = 155 bits (375), Expect = 7e-39
Identities = 68/136 (50%), Positives = 96/136 (70%), Gaps = 2/136 (1%)
Frame = +2
Query: 2 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 181
M KI+KPGKV L+ GR+AG+K ++++ D+G+ P+GHA VAG++RYP KV K MG
Sbjct: 1 MVKILKPGKVALITRGRFAGKKVVILQAIDQGSKSHPFGHAVVAGVERYPLKVTKSMGAK 60
Query: 182 KIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEK--FSAKDLKDPAKRKKLRFNTRVRFEE 355
+I +RS++KPF+K VNYNHLMPTRY+++ K +A K+P +R R + FEE
Sbjct: 61 RIARRSRVKPFIKVVNYNHLMPTRYALELDNLKGLITADTFKEPTQRSAARKTVKKTFEE 120
Query: 356 RYKSGKNKWFFQKLRF 403
+Y+SGK+ WFF LRF
Sbjct: 121 KYQSGKSAWFFTPLRF 136
>SPCC74.05 |rpl2702|rpl27-2|60S ribosomal protein
L27|Schizosaccharomyces pombe|chr 3|||Manual
Length = 136
Score = 152 bits (369), Expect = 4e-38
Identities = 66/136 (48%), Positives = 96/136 (70%), Gaps = 2/136 (1%)
Frame = +2
Query: 2 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 181
M KI+KPGKV LV GR+AG+K ++++N D+G+ P+GHA VAG++RYP KV K MG
Sbjct: 1 MVKILKPGKVALVTRGRFAGKKVVILQNVDQGSKSHPFGHAVVAGVERYPLKVTKSMGAK 60
Query: 182 KIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEK--FSAKDLKDPAKRKKLRFNTRVRFEE 355
+I KRS++KPF+K +NYNHLMPTRY+++ K + +P++R + + FEE
Sbjct: 61 RIAKRSRVKPFIKVINYNHLMPTRYALELDNLKGLVTPTTFSEPSQRSAAKKTVKNTFEE 120
Query: 356 RYKSGKNKWFFQKLRF 403
+Y++GK+ WFF LRF
Sbjct: 121 KYQTGKSAWFFTPLRF 136
>SPAC3H1.12c |snt2||Lid2 complex subunit Snt2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1131
Score = 27.9 bits (59), Expect = 1.3
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
Frame = -1
Query: 385 EPFVLSALVSLFETDPCVETQL---LALSWVF 299
EPF ++ ++S ++ PCV T L + L+W F
Sbjct: 120 EPFQIARIISFEKSRPCVSTNLYDSVRLNWYF 151
>SPAC26A3.10 |||Arf GAP protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 923
Score = 27.9 bits (59), Expect = 1.3
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +3
Query: 480 FFYCKQTFISIINKKNVYDCFKINDSVSKVLYYWV*VPAKIILSSYNMK 626
FF K + +I+ NV++ F + + + + Y+W P L Y K
Sbjct: 98 FFAQKLKYADLISSDNVHEIFLPDSNAANIRYHWEWSPPSGKLLEYECK 146
>SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase
Abc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1463
Score = 27.9 bits (59), Expect = 1.3
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +3
Query: 486 YCKQTFISIINKKNVYDCFKINDSVSKVL 572
+ K I ++ ++YDC+K N+SV VL
Sbjct: 50 WLKSLVIMVLLFTHIYDCYKTNESVWNVL 78
>SPAC1805.13 |rpl14||60S ribosomal protein L14|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 134
Score = 27.5 bits (58), Expect = 1.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 8 KIMKPGKVVLVLSGRYAGRKAIVVKNYD 91
+ ++ G+VVLV G Y G+ A++V D
Sbjct: 6 RYVEVGRVVLVTKGEYTGKLAVIVDIVD 33
>SPCC622.18 |rpl6||60S ribosomal protein L6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 195
Score = 27.5 bits (58), Expect = 1.7
Identities = 8/27 (29%), Positives = 19/27 (70%)
Frame = +2
Query: 14 MKPGKVVLVLSGRYAGRKAIVVKNYDE 94
+ PG V ++L+GR+ G++ +V+ ++
Sbjct: 52 LAPGTVCILLAGRFRGKRVVVLSQLED 78
>SPCC1281.06c |||acyl-coA desaturase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 479
Score = 26.6 bits (56), Expect = 3.0
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +1
Query: 4 G*DYETWKSGAGPQRPVR 57
G + E WKSGAG Q P++
Sbjct: 435 GMEVEVWKSGAGAQLPMK 452
>SPCC31H12.02c |mug73||membrane transporter |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 306
Score = 25.8 bits (54), Expect = 5.3
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Frame = -2
Query: 129 TKACPYGLSDV-PSS*FFTTMALRPAY--RPLRTSTTFPGFIIL 7
T AC YGL +V S+ FF +++R Y R ++ FP I++
Sbjct: 73 TMACNYGLKNVFSSASFFREVSVRMVYYVRYIQWLINFPLIIVM 116
>SPAC26H5.02c |||DNA replication ATPase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 504
Score = 25.8 bits (54), Expect = 5.3
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +2
Query: 203 IKPFVKGVNYNHLMPTRYSVDFSFEKFSAKDLKDPAKRKKLRFNTR 340
+ PF K Y H + T S S KF + K K R +TR
Sbjct: 39 VSPFFKKERYKHHLETNVSSHQSATKFIEPEPSPTKKTKLTRRDTR 84
>SPAC328.01c ||SPAC3A11.01|karyopherin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1234
Score = 25.4 bits (53), Expect = 7.0
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -1
Query: 184 FIFSHPFMNLARVSVDAGDESMSVWFVRCALVVILYDNGFT 62
FI F ++ D ESM F+R A +++ Y G T
Sbjct: 1092 FICQQVFQSVILAIHDPYFESMQSDFIRLACIILSYSQGIT 1132
>SPBC2F12.08c |ceg1|pce1|mRNA guanylyltransferase
Ceg1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 402
Score = 25.4 bits (53), Expect = 7.0
Identities = 14/45 (31%), Positives = 19/45 (42%)
Frame = +2
Query: 266 FSFEKFSAKDLKDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLR 400
+SF F D K+ K K R E Y +N+W F + R
Sbjct: 284 YSFFAFMYVDEKEWEKLKSFNVPLSERIVECYLDDENRWRFLRFR 328
>SPAC144.08 |||DNAJ domain protein Jac1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 225
Score = 25.4 bits (53), Expect = 7.0
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +2
Query: 173 GKNKIHKRSKIKPFVKGVNYNHLMPTR-YSVDFSFEKFSAKDLKDP 307
G + I R K P K VNYNH + S +F K D+ DP
Sbjct: 28 GNHWIFARFKFYPLNKIVNYNHFHSSSCQSEAKNFYKQFEGDISDP 73
>SPBP23A10.09 |||GINS complex subunit Psf1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 202
Score = 25.4 bits (53), Expect = 7.0
Identities = 11/42 (26%), Positives = 23/42 (54%)
Frame = +3
Query: 6 VRL*NLEKWCWSSAAGTQAVKPLS*RITTRAHLTNHTDMLSS 131
+RL L ++CWS ++ S R +LT ++++L++
Sbjct: 94 LRLQRLRQYCWSGGKRMESCLDTSLSTYERDYLTRYSELLAA 135
>SPBC16A3.11 |eso1||sister chromatid cohesion protein
Eso1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 25.4 bits (53), Expect = 7.0
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +2
Query: 137 IDRYPRKVHKRMGKN--KIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSAKDLKDPA 310
+DR R + + K+ +I+ + + P ++G L+ + SFE S KD+K P
Sbjct: 450 VDRNSRGIEGFLKKSNDEIYMSTSVSPSIEG--RAKLLNENMRENNSFELSSEKDIKSPK 507
Query: 311 KRKK 322
+ K+
Sbjct: 508 RLKR 511
>SPAC25G10.04c |rec10|rec20|meiotic recombination protein Rec10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 791
Score = 25.0 bits (52), Expect = 9.3
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -2
Query: 108 LSDVPSS*FFTTMALRPAYRPLRTSTTFPG 19
L ++P + FF T+ AY P S T G
Sbjct: 689 LEEIPYNKFFKTVEKNEAYNPSSKSATIDG 718
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 25.0 bits (52), Expect = 9.3
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +1
Query: 241 NANPLFCRLQL*KIQCKGPKRPS*AQEAAFQH 336
N +P+ QL K++ P++PS A +++F H
Sbjct: 271 NISPVSPFAQLVKLEPTSPQKPSFALDSSFSH 302
>SPAC57A7.05 |||conserved protein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1337
Score = 25.0 bits (52), Expect = 9.3
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = +2
Query: 260 VDFSFEKFSAKDLKDPAKRKKLRFNTRVRFEERYKSGKN 376
+ F K L DP+ R+K F ++ + +Y+ KN
Sbjct: 150 LQFQIPSNEKKSLDDPSPRRKPSFFSKSNLKRKYRYLKN 188
>SPBC211.03c |||guanyl-nucleotide exchange
factor|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1462
Score = 25.0 bits (52), Expect = 9.3
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +2
Query: 260 VDFSFEKFSAKDLKDPAKRKKLRFNTRVRFEER 358
VD++ E+F DP+ + NT ++ E+R
Sbjct: 821 VDYAIERFCQFTALDPSSVPGTQLNTAIKVEDR 853
>SPBC365.09c |||human KIN homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 304
Score = 25.0 bits (52), Expect = 9.3
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +2
Query: 173 GKNKIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEKF 283
G+ KIH + +++ N+ H+ TR+ F KF
Sbjct: 85 GEKKIHFNQFYQEYIRDKNHVHMNATRWHTLSEFCKF 121
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,525,288
Number of Sequences: 5004
Number of extensions: 49606
Number of successful extensions: 140
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 138
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 287744314
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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