Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_A24
         (592 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82267-3|CAB05191.1|  186|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z81015-4|CAB02658.2| 1170|Caenorhabditis elegans Hypothetical pr...    29   3.3  
AC024785-4|AAF60602.3|  466|Caenorhabditis elegans C-type lectin...    29   3.3  
Z81527-6|CAB04275.1|  739|Caenorhabditis elegans Hypothetical pr...    28   5.7  
Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical pr...    27   7.5  
AF003388-4|AAB54269.1| 1150|Caenorhabditis elegans Hypothetical ...    27   7.5  
AF016425-6|AAY86242.1|  104|Caenorhabditis elegans Hypothetical ...    27   10.0 

>Z82267-3|CAB05191.1|  186|Caenorhabditis elegans Hypothetical
           protein F38C2.5 protein.
          Length = 186

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = +2

Query: 449 PSIPQVPDFNTVGGGLDYMFKDQIGASATVXHTDF 553
           P +PQ   +     GL   F D  GASA+   TDF
Sbjct: 151 PLMPQFSSWFAPSSGLSREFLDNFGASASSSSTDF 185


>Z81015-4|CAB02658.2| 1170|Caenorhabditis elegans Hypothetical
           protein C11E4.6 protein.
          Length = 1170

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = -1

Query: 523 TNLVLEHVVQSATNSVEIGNLRNAGHVLSSESLCAEVMVIIVEQVDFASG 374
           T + LE V++ ++NS E     N       ++LC +  ++    VDF SG
Sbjct: 652 TAIFLEDVMRPSSNSAESPPSPNTSKAFIFDALCGKSRLVDSTNVDFFSG 701


>AC024785-4|AAF60602.3|  466|Caenorhabditis elegans C-type lectin
           protein 72 protein.
          Length = 466

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 12/36 (33%), Positives = 23/36 (63%), Gaps = 4/36 (11%)
 Frame = +2

Query: 329 TLTNTHIP----GFGDKLTAAGKVNLFHNDYHDLSA 424
           T  ++H+P    GFGD  T +  +++ +N Y+D+S+
Sbjct: 230 TYVSSHLPDSTLGFGDSTTGSNVLDVINNFYNDISS 265


>Z81527-6|CAB04275.1|  739|Caenorhabditis elegans Hypothetical
           protein F35E12.7a protein.
          Length = 739

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 25/116 (21%), Positives = 45/116 (38%)
 Frame = +2

Query: 47  SASTAGTCSLKSLATTSNSMMISRSSGATPGCAGKRVLSLSTLTVPQVL*SRYL*LATKT 226
           S++T  T  ++S  T       S ++  TP     + +S +++  P         L T  
Sbjct: 545 SSTTKSTRPMQSTTTYQKLAQASSTASTTPIPITTQNISTASIATPSTKTPITPSLITTR 604

Query: 227 TSSVLLAPLIFLNQLSLEAVTAGLAYDNVNGHGATLTNTHIPGFGDKLTAAGKVNL 394
           +S+  L+P++          T   A  + +    T   T IPG     T +  V+L
Sbjct: 605 SSTTKLSPIVITKSSLAYTATPTSAAPSTSALTITTHTTPIPGVLTSKTTSKTVDL 660


>Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical protein
            F36H2.3 protein.
          Length = 1388

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 21/74 (28%), Positives = 27/74 (36%)
 Frame = +2

Query: 11   MSPSYSSCLFSWSASTAGTCSLKSLATTSNSMMISRSSGATPGCAGKRVLSLSTLTVPQV 190
            M P  S    + S +  G  +  S AT SN M      G      G      S LT+P  
Sbjct: 1004 MGPFPSGTTVTGSCTNGGAITGASTATCSNGMWNPTFLGTCSLIGGSTTGQCSALTIPSG 1063

Query: 191  L*SRYL*LATKTTS 232
              + Y   +  TTS
Sbjct: 1064 AQATYSPFSLSTTS 1077


>AF003388-4|AAB54269.1| 1150|Caenorhabditis elegans Hypothetical
           protein R10F2.6 protein.
          Length = 1150

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +1

Query: 442 EHAQHSSSSRFQHCWWRIGLHVQGPDWC 525
           EH    SS R+ H W R+ +    PD C
Sbjct: 688 EHLYRCSSPRYTHDWARVRMSSDQPDDC 715


>AF016425-6|AAY86242.1|  104|Caenorhabditis elegans Hypothetical
           protein F59A7.11 protein.
          Length = 104

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 14/53 (26%), Positives = 25/53 (47%)
 Frame = +1

Query: 28  LVSVLLVGVNSRYVLVEEPGYYIEQYDDQPEQWGNSRVRRQAGALTINSDGTS 186
           L++ LL  +    V+   PG   +  +D  +     R RR  G  T+ +DG++
Sbjct: 4   LINSLLFTIAILAVVWGYPGQQADHVEDLTKNRNEPRARRDLGTETVRADGSA 56


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,985,547
Number of Sequences: 27780
Number of extensions: 295769
Number of successful extensions: 871
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 870
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)