Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_A22
         (572 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    23   2.8  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    23   2.8  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    22   5.0  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    21   6.6  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    21   6.6  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    21   6.6  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    21   6.6  
DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholi...    21   8.7  

>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -1

Query: 413 VYKVPNVIS*IFYFYHNLLCVTIMYYIII 327
           V+K+  +   I Y    L C T +YYIII
Sbjct: 90  VFKIAPIFKGIGYATCVLSCWTNIYYIII 118


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -1

Query: 413 VYKVPNVIS*IFYFYHNLLCVTIMYYIII 327
           V+K+  +   I Y    L C T +YYIII
Sbjct: 143 VFKIAPIFKGIGYATCVLSCWTNIYYIII 171


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/29 (24%), Positives = 18/29 (62%)
 Frame = -2

Query: 565 SFHVLICKRLTI*RVTDVTTFILLSFMCI 479
           +F+++I ++     V  +   +L+SF+C+
Sbjct: 224 TFYIIIRRKTLFYTVNLILPTVLISFLCV 252


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -1

Query: 236 SYQSPRGHNKLQIYEKKNIDSVL 168
           ++  P  H++    E+KN+D+VL
Sbjct: 17  THSFPGAHDEDSKEERKNVDTVL 39


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -1

Query: 236 SYQSPRGHNKLQIYEKKNIDSVL 168
           ++  P  H++    E+KN+D+VL
Sbjct: 17  THSFPGAHDEDSKEERKNVDTVL 39


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -1

Query: 236 SYQSPRGHNKLQIYEKKNIDSVL 168
           ++  P  H++    E+KN+D+VL
Sbjct: 17  THSFPGAHDEDSKEERKNVDTVL 39


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +2

Query: 464 KEIVKNTHK**QNKSSNI 517
           KE+++NTH    N++ NI
Sbjct: 406 KELIRNTHCVNNNQNDNI 423


>DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholine
           receptor alpha3subunit protein.
          Length = 566

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 316 SFLTILI*YCPHNS 275
           SFLT+L+ Y P +S
Sbjct: 255 SFLTVLVFYLPSDS 268


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,080
Number of Sequences: 438
Number of extensions: 3165
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16504155
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)