Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_A11
(319 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein ... 25 0.29
AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein ... 25 0.29
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 23 1.2
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 23 1.2
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 21 3.6
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 20 6.3
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 20 6.3
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 20 6.3
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 20 6.3
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 20 8.3
>DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein 1
protein.
Length = 116
Score = 24.6 bits (51), Expect = 0.29
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +1
Query: 19 IVFCTYNLFTNVTMSEAFFDEYDYYNFD 102
IV +L T E + D+YDY N D
Sbjct: 6 IVILILSLLTWTYAEELYSDKYDYVNID 33
>AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein
protein.
Length = 116
Score = 24.6 bits (51), Expect = 0.29
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +1
Query: 19 IVFCTYNLFTNVTMSEAFFDEYDYYNFD 102
IV +L T E + D+YDY N D
Sbjct: 6 IVILILSLLTWTYAEELYSDKYDYVNID 33
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 22.6 bits (46), Expect = 1.2
Identities = 12/35 (34%), Positives = 14/35 (40%)
Frame = +2
Query: 152 GRPPNTRITSTPLDILEXXXXXXXXXXTTKSPINN 256
G P NTR TP + LE +PI N
Sbjct: 140 GNPWNTRYCLTPTERLEALCWTQDEDVICSTPIGN 174
Score = 20.6 bits (41), Expect = 4.7
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -3
Query: 263 YIYCLLDFLLFSVFTNFVTIFLEC 192
Y++ LLD S F +F EC
Sbjct: 440 YVFQLLDSYAVSGFCLLFLMFFEC 463
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 22.6 bits (46), Expect = 1.2
Identities = 12/35 (34%), Positives = 14/35 (40%)
Frame = +2
Query: 152 GRPPNTRITSTPLDILEXXXXXXXXXXTTKSPINN 256
G P NTR TP + LE +PI N
Sbjct: 193 GNPWNTRYCLTPTERLEALCWTQDEDIICSTPIGN 227
Score = 20.6 bits (41), Expect = 4.7
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -3
Query: 263 YIYCLLDFLLFSVFTNFVTIFLEC 192
Y++ LLD S F +F EC
Sbjct: 493 YVFQLLDSYAVSGFCLLFLMFFEC 516
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.0 bits (42), Expect = 3.6
Identities = 11/40 (27%), Positives = 16/40 (40%)
Frame = +1
Query: 136 KQRTKREATEHTNHFDPSGHSRKIVTKLVNTENNKKSNKQ 255
+ R KRE S S ++ + N NN NK+
Sbjct: 66 RSRDKRERERSKERKIISSLSNNYISNISNYNNNNNYNKK 105
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.2 bits (40), Expect = 6.3
Identities = 7/31 (22%), Positives = 15/31 (48%)
Frame = +1
Query: 25 FCTYNLFTNVTMSEAFFDEYDYYNFDHDKHI 117
+ YN + N + + + YYN ++ + I
Sbjct: 91 YSNYNNYNNNNYNNNNYKKLQYYNINYIEQI 121
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.2 bits (40), Expect = 6.3
Identities = 7/31 (22%), Positives = 15/31 (48%)
Frame = +1
Query: 25 FCTYNLFTNVTMSEAFFDEYDYYNFDHDKHI 117
+ YN + N + + + YYN ++ + I
Sbjct: 91 YSNYNNYNNNNYNNNNYKKLQYYNINYIEQI 121
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.2 bits (40), Expect = 6.3
Identities = 7/31 (22%), Positives = 15/31 (48%)
Frame = +1
Query: 25 FCTYNLFTNVTMSEAFFDEYDYYNFDHDKHI 117
+ YN + N + + + YYN ++ + I
Sbjct: 91 YSNYNNYNNNNYNNNNYKKLQYYNINYIEQI 121
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.2 bits (40), Expect = 6.3
Identities = 7/31 (22%), Positives = 15/31 (48%)
Frame = +1
Query: 25 FCTYNLFTNVTMSEAFFDEYDYYNFDHDKHI 117
+ YN + N + + + YYN ++ + I
Sbjct: 91 YSNYNNYNNNNYNNNNYKKLQYYNINYIEQI 121
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 19.8 bits (39), Expect = 8.3
Identities = 8/24 (33%), Positives = 9/24 (37%)
Frame = +1
Query: 127 HGGKQRTKREATEHTNHFDPSGHS 198
+GG H NH GHS
Sbjct: 270 YGGVYHLDNHHVHHANHHAILGHS 293
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,464
Number of Sequences: 438
Number of extensions: 1685
Number of successful extensions: 17
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 6844365
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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