Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_A02
(663 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0510 - 21615724-21615909,21615992-21616075,21616164-216162... 350 7e-97
01_06_0458 + 29531069-29531126,29531247-29531302,29531407-295315... 349 1e-96
02_01_0561 + 4120268-4120339,4121462-4121588,4121715-4121770,412... 68 8e-12
06_03_1014 - 26902971-26903085,26903182-26903270,26904302-269043... 67 1e-11
09_03_0130 - 12609417-12610462,12610786-12611040,12611139-126112... 33 0.20
06_01_0094 + 779097-779155,779882-781019,781732-782115,782842-78... 31 1.1
05_06_0096 + 25513535-25514024,25514139-25514236,25514395-255147... 30 1.9
05_03_0200 + 9752625-9753182 30 1.9
12_02_0335 - 17669232-17670063,17670619-17672150 29 3.3
11_06_0586 + 25253863-25254285 29 3.3
07_03_1253 + 25201629-25202084,25203264-25203399,25204564-252047... 29 3.3
03_02_0352 + 7749902-7751788,7752547-7752615 29 3.3
11_02_0101 - 8306468-8307099,8307227-8307404,8307990-8308259 29 4.4
06_01_1103 + 9085156-9085602 29 4.4
03_06_0239 - 32578231-32578353,32578431-32578655,32579081-325792... 28 5.8
12_01_1018 - 10386308-10386416,10386597-10386932,10387143-10387477 28 7.6
08_02_0592 + 19064025-19066596,19067036-19067084,19068530-190686... 28 7.6
05_07_0293 + 29031318-29031812,29032096-29032158,29032365-290324... 28 7.6
>06_03_0510 -
21615724-21615909,21615992-21616075,21616164-21616217,
21616324-21616371,21616529-21616611,21616963-21617113,
21617648-21617785,21617966-21618094,21618391-21618596,
21618734-21618845,21619145-21619204,21619331-21619429,
21619520-21619575,21620230-21620313,21621407-21621500
Length = 527
Score = 350 bits (860), Expect = 7e-97
Identities = 169/195 (86%), Positives = 180/195 (92%), Gaps = 2/195 (1%)
Frame = +2
Query: 5 IDVMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKV--PGKSVLDDHEDNFAIVFAA 178
IDVMNSIARGQKIP+FSAAGLPHNEIAAQICRQAGLVK GK +DNFAIVFAA
Sbjct: 191 IDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKSLEKGKHAEGGEDDNFAIVFAA 250
Query: 179 MGVNMETARFFKQDFEENGSMENVCLFLNLANDPTIERIITPRLALTAAEFLAYQCEKHV 358
MGVNMETA+FFK+DFEENGSME V LFLNLANDPTIERIITPR+ALT AE+LAY+C KHV
Sbjct: 251 MGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHV 310
Query: 359 LVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNGSITQIPI 538
LVILTDMSSYA+ALREVSAAREEVPGRRG+PGYMYTDLATIYERAGR+EGR+GSITQIPI
Sbjct: 311 LVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRSGSITQIPI 370
Query: 539 LTMPNDDITHPIPDL 583
LTMPNDDITHP PDL
Sbjct: 371 LTMPNDDITHPTPDL 385
>01_06_0458 +
29531069-29531126,29531247-29531302,29531407-29531505,
29531989-29532048,29532285-29532396,29532459-29532694,
29533092-29533220,29533325-29533462,29534043-29534193,
29534394-29534476,29534658-29534705,29534828-29534881,
29534971-29535054,29535152-29535337
Length = 497
Score = 349 bits (858), Expect = 1e-96
Identities = 171/196 (87%), Positives = 182/196 (92%), Gaps = 3/196 (1%)
Frame = +2
Query: 5 IDVMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKVPGKS--VLDDHED-NFAIVFA 175
IDVMNSIARGQKIP+FSAAGLPHNEIAAQICRQAGLVK KS +L+ ED NFAIVFA
Sbjct: 160 IDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKSDNILESSEDENFAIVFA 219
Query: 176 AMGVNMETARFFKQDFEENGSMENVCLFLNLANDPTIERIITPRLALTAAEFLAYQCEKH 355
AMGVNMETA+FFK+DFEENGSME V LFLNLANDPTIERIITPR+ALT AE+LAY+C KH
Sbjct: 220 AMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKH 279
Query: 356 VLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNGSITQIP 535
VLVILTDMSSYA+ALREVSAAREEVPGRRG+PGYMYTDLATIYERAGR+EGR GSITQIP
Sbjct: 280 VLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQIP 339
Query: 536 ILTMPNDDITHPIPDL 583
ILTMPNDDITHP PDL
Sbjct: 340 ILTMPNDDITHPTPDL 355
>02_01_0561 +
4120268-4120339,4121462-4121588,4121715-4121770,
4121841-4121912,4122017-4122128,4122247-4122284,
4122412-4122513,4122619-4122675,4122755-4122826,
4122992-4123093,4123210-4123405,4123988-4124094,
4124497-4124691,4124771-4124857,4124905-4124913,
4125599-4125703,4126067-4126164,4126250-4126328,
4126912-4127000,4127086-4127200
Length = 629
Score = 67.7 bits (158), Expect = 8e-12
Identities = 41/126 (32%), Positives = 67/126 (53%), Gaps = 6/126 (4%)
Frame = +2
Query: 215 QDFEENGSMENVCLFLNLANDPTIERIITPRLALTAAEFLAYQCEKHVLVILTDMSS-YA 391
+D E M+ L N +N P R + +T AE+ Y+ + + ++ D +S +A
Sbjct: 304 EDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEY--YRDMGYNVSMMADSTSRWA 361
Query: 392 EALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVE-----GRNGSITQIPILTMPND 556
EALRE+S E+P G+P Y+ LA+ YERAG+V R+GS+T + ++ P
Sbjct: 362 EALREISGRLAEMPADSGYPAYLAARLASFYERAGKVRCLGSPKRDGSVTIVGAVSPPGG 421
Query: 557 DITHPI 574
D + P+
Sbjct: 422 DFSDPV 427
>06_03_1014 -
26902971-26903085,26903182-26903270,26904302-26904380,
26904488-26904585,26904848-26904952,26905031-26905117,
26905218-26905412,26905890-26905996,26906559-26906754,
26906865-26906966,26907100-26907171,26907404-26907505,
26907638-26907675,26907769-26907880,26907972-26908028,
26908122-26908177,26908283-26908409,26908856-26908910,
26908919-26909049
Length = 640
Score = 67.3 bits (157), Expect = 1e-11
Identities = 40/124 (32%), Positives = 62/124 (50%), Gaps = 5/124 (4%)
Frame = +2
Query: 218 DFEENGSMENVCLFLNLANDPTIERIITPRLALTAAEFLAYQCEKHVLVILTDMSSYAEA 397
D E M+ L N +N P R + +T AE+ +V ++ S +AEA
Sbjct: 319 DGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFR-DMGYNVSMMADSTSRWAEA 377
Query: 398 LREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVE-----GRNGSITQIPILTMPNDDI 562
LRE+S E+P G+P Y+ LA+ YERAG+V+ R GS+T + ++ P D
Sbjct: 378 LREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGSPDRTGSVTIVGAVSPPGGDF 437
Query: 563 THPI 574
+ P+
Sbjct: 438 SDPV 441
>09_03_0130 -
12609417-12610462,12610786-12611040,12611139-12611253,
12611376-12611428,12611854-12612114,12612252-12612302,
12612412-12612660,12612779-12613007,12613292-12613666
Length = 877
Score = 33.1 bits (72), Expect = 0.20
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +2
Query: 92 ICRQAGLVKVPGKSVLDDHEDNFAIVFAAMGVNMETARFFKQDFEENGSMENVCLFLNLA 271
ICR A + +P + +D+ +F + +E A K+ E+N +N+ LFL L
Sbjct: 211 ICRYAKVSLLPNQQRVDEDISSFRLKLPTP--ELERALSVKESLEKNPVFKNILLFLVLM 268
Query: 272 NDPTI--ERIITPRLALTAA 325
+ + I+TP +++ +A
Sbjct: 269 GTSMVIGDGILTPSMSVMSA 288
>06_01_0094 +
779097-779155,779882-781019,781732-782115,782842-783060
Length = 599
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/63 (28%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Frame = -1
Query: 252 HTFSMEPFSSKSCLKNLAVSMLTPIAANTMAKLSS---WSSSTDLPGTLTRPACLQIWAA 82
H FS+ SS S +K+LA+ ++ I++ + +SS W++S+ P T + + W +
Sbjct: 401 HAFSLM-ISSSSGVKSLAILKVSLISSGDLPLISSAVRWTASSRTPSTPIKFPAISRWYS 459
Query: 81 ISL 73
+S+
Sbjct: 460 VSV 462
>05_06_0096 +
25513535-25514024,25514139-25514236,25514395-25514783,
25515485-25515599,25515816-25515917,25516584-25516734,
25517162-25517250,25517518-25517566,25517723-25517763,
25517929-25518116,25518285-25518402,25518900-25519079,
25519172-25519294,25519368-25519455,25519549-25519679,
25519768-25519866,25520822-25521253
Length = 960
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 428 VPGRRGFPGYMYTDLATIYERAGRVEGRNGSITQIPI 538
VP R P Y + ++E GR+ GR G++T +PI
Sbjct: 440 VPTRTDVPEYQKLT-SQVHEIVGRINGRFGTLTAVPI 475
>05_03_0200 + 9752625-9753182
Length = 185
Score = 29.9 bits (64), Expect = 1.9
Identities = 21/64 (32%), Positives = 24/64 (37%), Gaps = 2/64 (3%)
Frame = -2
Query: 407 PRAEPQRTKTCQLRLPTR--VSRTGRPRIRRLSTRDAV**SSRWWDRWPDSRTGTRSPWN 234
P R KT + +PTR + R R A RWW R P R G R W
Sbjct: 48 PATYRSRPKTGRYWMPTRRPLRRASGEEEVMPGMRAASRSRGRWWRRRPALRQGDRGGWR 107
Query: 233 RSPR 222
R R
Sbjct: 108 RPAR 111
>12_02_0335 - 17669232-17670063,17670619-17672150
Length = 787
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = -1
Query: 243 SMEPFSSKSCLKNLAVSMLTPIAANTMAKLSSWSSSTDLPGTLTR 109
S +P + K L+ L +S + +AA +S SSS+ GT+ R
Sbjct: 97 SSKPVNMKQALRRLCISQASEMAAMKRLSMSPGSSSSSEVGTIHR 141
>11_06_0586 + 25253863-25254285
Length = 140
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -2
Query: 287 RWWDRWPDSRTGTRSPWNRSPRSPA*RTW 201
RWW R P R G R W R PA R W
Sbjct: 54 RWWRRRPVLRQGDRGGWRR----PARRKW 78
>07_03_1253 +
25201629-25202084,25203264-25203399,25204564-25204700,
25205439-25206121,25206767-25206911,25207669-25207701
Length = 529
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +2
Query: 275 DPTIERIITPRLALTAAEFLAYQCEKHVLVILTDMSSYAEALREVSAAREEVP 433
DP +E +P A AA +AY+C DMS+ +AL + A ++VP
Sbjct: 340 DPALEGRYSPAAAREAAA-VAYRCLSGSPKNRPDMSAVVDALEPLLVATDDVP 391
>03_02_0352 + 7749902-7751788,7752547-7752615
Length = 651
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/54 (31%), Positives = 22/54 (40%)
Frame = -1
Query: 336 AKNSAAVNARRGVMILSMVGSLARFKNRHTFSMEPFSSKSCLKNLAVSMLTPIA 175
A + A V GV S GS+ K EP+ SK C + + PIA
Sbjct: 301 ACHRAGVPTSSGVNATSSSGSVPDGKKTRVLKREPYQSKRCGCGFRIRAIVPIA 354
>11_02_0101 - 8306468-8307099,8307227-8307404,8307990-8308259
Length = 359
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = -3
Query: 163 GEVILVVVEHGFTGYLDKTGLSTDLGGDFVVGETGGRENGNLLTTGDGVH 14
GE + V G G + G + G +VVG G E LL T G H
Sbjct: 169 GETVFVSAASGAVGQI--VGQLAKIAGCYVVGSAGSDEKVTLLKTKFGFH 216
>06_01_1103 + 9085156-9085602
Length = 148
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 287 RWWDRWPDSRTGTRSPWNRSPR 222
RWW R P R G R W R R
Sbjct: 107 RWWRRRPALRQGDRGGWRRPAR 128
>03_06_0239 -
32578231-32578353,32578431-32578655,32579081-32579248,
32579331-32579446,32579540-32579692,32579779-32579922,
32580775-32581576
Length = 576
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/25 (64%), Positives = 16/25 (64%)
Frame = +3
Query: 273 TIPPSRGSSHRVSR*QPPNSWPTSA 347
TIPPS SSH SR P S PTSA
Sbjct: 51 TIPPSEHSSHHSSRSTDP-STPTSA 74
>12_01_1018 - 10386308-10386416,10386597-10386932,10387143-10387477
Length = 259
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/49 (26%), Positives = 22/49 (44%)
Frame = +2
Query: 509 RNGSITQIPILTMPNDDITHPIPDLPVIYRGTDLRNVSCQQTDLSPVTC 655
R+G P+ T P+ DI P+L ++ RG + + + TC
Sbjct: 136 RDGEANNGPVPTAPSHDIYRAHPELVLLLRGEEYLRIKRLPNAAADATC 184
>08_02_0592 +
19064025-19066596,19067036-19067084,19068530-19068605,
19068767-19068922
Length = 950
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1
Query: 61 RSPPQRNRRPDL*TGRSCQGT 123
RSPP R RRPD+ G +GT
Sbjct: 26 RSPPPRRRRPDVAAGWRGEGT 46
>05_07_0293 +
29031318-29031812,29032096-29032158,29032365-29032490,
29032783-29032911,29033161-29033311,29033853-29033962,
29034502-29034607,29034697-29034894,29034988-29035030,
29035129-29035207
Length = 499
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -2
Query: 395 PQRTKTCQLRLPTRVSRTGRPRIR 324
P+R C RL R R GRPR+R
Sbjct: 24 PRRAVPCARRLVLRPPRAGRPRLR 47
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,983,235
Number of Sequences: 37544
Number of extensions: 461994
Number of successful extensions: 1579
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1575
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1667659452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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