Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_P21
         (456 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC115363-1|AAI15364.1|  799|Homo sapiens ARHGAP12 protein protein.     30   4.3  
BC115362-1|AAI15363.1|  799|Homo sapiens ARHGAP12 protein protein.     30   4.3  
BC094719-1|AAH94719.1|  841|Homo sapiens ARHGAP12 protein protein.     30   4.3  
AY033595-1|AAK52312.1|  846|Homo sapiens rho-GAP domain containi...    30   4.3  
AY033594-1|AAK52311.1|  816|Homo sapiens rho-GAP domain containi...    30   4.3  
AL390715-4|CAI12372.1|  846|Homo sapiens Rho GTPase activating p...    30   4.3  
AL390715-3|CAI12373.1|  794|Homo sapiens Rho GTPase activating p...    30   4.3  
AL390715-2|CAI12371.1|  816|Homo sapiens Rho GTPase activating p...    30   4.3  
AL834250-1|CAD38926.2|  792|Homo sapiens hypothetical protein pr...    29   5.7  
U50078-1|AAD12586.1| 4861|Homo sapiens p532 protein.                   29   7.6  

>BC115363-1|AAI15364.1|  799|Homo sapiens ARHGAP12 protein protein.
          Length = 799

 Score = 29.9 bits (64), Expect = 4.3
 Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
 Frame = +2

Query: 176 PYDNSRHFHIKQEEMDDEQRET-SKKLLDCPGIPRRVTEPSFKTHKFKSSNKLASSIPNL 352
           P +NS+ F++  + + +  R+     +    G+P   T+     H  +S+  + + +P L
Sbjct: 55  PDENSKAFYVPAQYVKEVTRKALMPPVKQVAGLPNNSTKIMQSLHLQRSTENV-NKLPEL 113

Query: 353 SSFGAP 370
           SSFG P
Sbjct: 114 SSFGKP 119


>BC115362-1|AAI15363.1|  799|Homo sapiens ARHGAP12 protein protein.
          Length = 799

 Score = 29.9 bits (64), Expect = 4.3
 Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
 Frame = +2

Query: 176 PYDNSRHFHIKQEEMDDEQRET-SKKLLDCPGIPRRVTEPSFKTHKFKSSNKLASSIPNL 352
           P +NS+ F++  + + +  R+     +    G+P   T+     H  +S+  + + +P L
Sbjct: 55  PDENSKAFYVPAQYVKEVTRKALMPPVKQVAGLPNNSTKIMQSLHLQRSTENV-NKLPEL 113

Query: 353 SSFGAP 370
           SSFG P
Sbjct: 114 SSFGKP 119


>BC094719-1|AAH94719.1|  841|Homo sapiens ARHGAP12 protein protein.
          Length = 841

 Score = 29.9 bits (64), Expect = 4.3
 Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
 Frame = +2

Query: 176 PYDNSRHFHIKQEEMDDEQRET-SKKLLDCPGIPRRVTEPSFKTHKFKSSNKLASSIPNL 352
           P +NS+ F++  + + +  R+     +    G+P   T+     H  +S+  + + +P L
Sbjct: 55  PDENSKAFYVPAQYVKEVTRKALMPPVKQVAGLPNNSTKIMQSLHLQRSTENV-NKLPEL 113

Query: 353 SSFGAP 370
           SSFG P
Sbjct: 114 SSFGKP 119


>AY033595-1|AAK52312.1|  846|Homo sapiens rho-GAP domain containing
           protein ARHGAP12b protein.
          Length = 846

 Score = 29.9 bits (64), Expect = 4.3
 Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
 Frame = +2

Query: 176 PYDNSRHFHIKQEEMDDEQRET-SKKLLDCPGIPRRVTEPSFKTHKFKSSNKLASSIPNL 352
           P +NS+ F++  + + +  R+     +    G+P   T+     H  +S+  + + +P L
Sbjct: 55  PDENSKAFYVPAQYVKEVTRKALMPPVKQVAGLPNNSTKIMQSLHLQRSTENV-NKLPEL 113

Query: 353 SSFGAP 370
           SSFG P
Sbjct: 114 SSFGKP 119


>AY033594-1|AAK52311.1|  816|Homo sapiens rho-GAP domain containing
           protein ARHGAP12a protein.
          Length = 816

 Score = 29.9 bits (64), Expect = 4.3
 Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
 Frame = +2

Query: 176 PYDNSRHFHIKQEEMDDEQRET-SKKLLDCPGIPRRVTEPSFKTHKFKSSNKLASSIPNL 352
           P +NS+ F++  + + +  R+     +    G+P   T+     H  +S+  + + +P L
Sbjct: 55  PDENSKAFYVPAQYVKEVTRKALMPPVKQVAGLPNNSTKIMQSLHLQRSTENV-NKLPEL 113

Query: 353 SSFGAP 370
           SSFG P
Sbjct: 114 SSFGKP 119


>AL390715-4|CAI12372.1|  846|Homo sapiens Rho GTPase activating
           protein 12 protein.
          Length = 846

 Score = 29.9 bits (64), Expect = 4.3
 Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
 Frame = +2

Query: 176 PYDNSRHFHIKQEEMDDEQRET-SKKLLDCPGIPRRVTEPSFKTHKFKSSNKLASSIPNL 352
           P +NS+ F++  + + +  R+     +    G+P   T+     H  +S+  + + +P L
Sbjct: 55  PDENSKAFYVPAQYVKEVTRKALMPPVKQVAGLPNNSTKIMQSLHLQRSTENV-NKLPEL 113

Query: 353 SSFGAP 370
           SSFG P
Sbjct: 114 SSFGKP 119


>AL390715-3|CAI12373.1|  794|Homo sapiens Rho GTPase activating
           protein 12 protein.
          Length = 794

 Score = 29.9 bits (64), Expect = 4.3
 Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
 Frame = +2

Query: 176 PYDNSRHFHIKQEEMDDEQRET-SKKLLDCPGIPRRVTEPSFKTHKFKSSNKLASSIPNL 352
           P +NS+ F++  + + +  R+     +    G+P   T+     H  +S+  + + +P L
Sbjct: 55  PDENSKAFYVPAQYVKEVTRKALMPPVKQVAGLPNNSTKIMQSLHLQRSTENV-NKLPEL 113

Query: 353 SSFGAP 370
           SSFG P
Sbjct: 114 SSFGKP 119


>AL390715-2|CAI12371.1|  816|Homo sapiens Rho GTPase activating
           protein 12 protein.
          Length = 816

 Score = 29.9 bits (64), Expect = 4.3
 Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
 Frame = +2

Query: 176 PYDNSRHFHIKQEEMDDEQRET-SKKLLDCPGIPRRVTEPSFKTHKFKSSNKLASSIPNL 352
           P +NS+ F++  + + +  R+     +    G+P   T+     H  +S+  + + +P L
Sbjct: 55  PDENSKAFYVPAQYVKEVTRKALMPPVKQVAGLPNNSTKIMQSLHLQRSTENV-NKLPEL 113

Query: 353 SSFGAP 370
           SSFG P
Sbjct: 114 SSFGKP 119


>AL834250-1|CAD38926.2|  792|Homo sapiens hypothetical protein
           protein.
          Length = 792

 Score = 29.5 bits (63), Expect = 5.7
 Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
 Frame = +2

Query: 176 PYDNSRHFHIKQEEMDDEQRET-SKKLLDCPGIPRRVTEPSFKTHKFKSSNKLASSIPNL 352
           P +NS+ F++  + + +  R+     +    G+P   T+     H  +S+  + + +P L
Sbjct: 53  PDENSKAFYVPAQYVREVTRKALMPPVKQVAGLPNNSTKIMQSLHLQRSTENV-NKLPEL 111

Query: 353 SSFGAP 370
           SSFG P
Sbjct: 112 SSFGKP 117


>U50078-1|AAD12586.1| 4861|Homo sapiens p532 protein.
          Length = 4861

 Score = 29.1 bits (62), Expect = 7.6
 Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
 Frame = +2

Query: 158  IGK*SLPYDNSRHFHIKQEEMDDEQRETSKKLLDCPGIPRRVTEPSFKTHKFKSSNKLAS 337
            +GK S      +H H  +E+ D EQ+  S+  LD           S  T   KS N++AS
Sbjct: 2406 MGKQSTKRHEKKHRHESEEKGDVEQKPESESALDMRTGLTSDDVKSQSTTSSKSENEIAS 2465

Query: 338  -SI-PNLSSFGAPHR 376
             S+ P L S  + H+
Sbjct: 2466 FSLDPTLPSVESQHQ 2480


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,405,532
Number of Sequences: 237096
Number of extensions: 1064292
Number of successful extensions: 2011
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1940
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2010
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3815180866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)