Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_P21
         (456 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U70845-1|AAB09098.1|   79|Caenorhabditis elegans Hypothetical pr...    30   0.92 
Z69662-7|CAA93497.2| 1132|Caenorhabditis elegans Hypothetical pr...    28   3.7  
AF100657-2|AAC68958.2| 1635|Caenorhabditis elegans Hypothetical ...    27   4.9  
Z81546-3|CAB04451.1|  321|Caenorhabditis elegans Hypothetical pr...    27   6.5  
Z69662-5|CAA93500.3|  449|Caenorhabditis elegans Hypothetical pr...    27   8.6  
AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical...    27   8.6  

>U70845-1|AAB09098.1|   79|Caenorhabditis elegans Hypothetical
           protein F22H10.3 protein.
          Length = 79

 Score = 29.9 bits (64), Expect = 0.92
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -1

Query: 456 VVPVLKFIIDSIPPPVIILGDFYAHHSLW 370
           V P++   +  +PPPV+++ + Y HH  W
Sbjct: 42  VAPMMAAPMYGMPPPVVVIEEPYHHHHHW 70


>Z69662-7|CAA93497.2| 1132|Caenorhabditis elegans Hypothetical protein
            F56D5.9 protein.
          Length = 1132

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 14/50 (28%), Positives = 27/50 (54%)
 Frame = +2

Query: 119  GVKQESEIDFEIIIGK*SLPYDNSRHFHIKQEEMDDEQRETSKKLLDCPG 268
            GV  E+ + +   I K  +P+    HFH+  E+M + ++   K+L++  G
Sbjct: 1017 GVVYETVLKWAEWIHKQKIPFLFGVHFHVAIEKMSENEKMHLKQLVEMHG 1066


>AF100657-2|AAC68958.2| 1635|Caenorhabditis elegans Hypothetical
           protein F52C12.4 protein.
          Length = 1635

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
 Frame = +3

Query: 165 SDHYRMIIQGTSTLNKKRWMMNKEKHL---KNF*IAPEYLDES 284
           S+ Y   I  TS +N K+W+ N+ KH+   +N  I P+ L +S
Sbjct: 754 SEKYIFFITKTS-VNSKKWLKNRRKHVFCDENLNILPKPLWQS 795


>Z81546-3|CAB04451.1|  321|Caenorhabditis elegans Hypothetical
           protein F53A2.3 protein.
          Length = 321

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 20/86 (23%), Positives = 37/86 (43%), Gaps = 5/86 (5%)
 Frame = +2

Query: 62  EPYNSQLQFVSLYFSNGGSGVKQESEIDFE-----IIIGK*SLPYDNSRHFHIKQEEMDD 226
           E  N+ L +     SNG S  + +SEI  E     ++    ++P + S  F   +EE+ +
Sbjct: 19  ETLNNSLNYDEAANSNGSSTFQDQSEIKIEHIAPNLVFENGTVPQEQSNSFQWYEEEVSN 78

Query: 227 EQRETSKKLLDCPGIPRRVTEPSFKT 304
           +   +S +       P  +   S+ T
Sbjct: 79  DACVSSNEYSGVKLCPFNIGFKSYNT 104


>Z69662-5|CAA93500.3|  449|Caenorhabditis elegans Hypothetical
           protein F56D5.6 protein.
          Length = 449

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = +2

Query: 212 EEMDDEQRETSKKLLDCPGIPR 277
           EE DD ++E ++ + D PG+P+
Sbjct: 160 EEYDDVEKEPNESVPDVPGLPK 181


>AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical
            protein W03F11.4 protein.
          Length = 1406

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 9/33 (27%), Positives = 22/33 (66%)
 Frame = +2

Query: 200  HIKQEEMDDEQRETSKKLLDCPGIPRRVTEPSF 298
            H+++E+ + E+R++ +K+   P +P++ T   F
Sbjct: 1048 HVQEEKKNAEKRKSGEKVSKKPIVPKKDTREKF 1080


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,525,193
Number of Sequences: 27780
Number of extensions: 181594
Number of successful extensions: 475
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 460
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 475
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 809909048
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)