Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_P20
(449 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0322 - 8938101-8938149,8938235-8938458,8938545-8938605,893... 29 1.3
12_02_1265 - 27435096-27437675 29 1.7
07_03_0041 + 12727924-12728250 29 1.7
07_01_0553 - 4119782-4119988,4120160-4120320,4120861-4121155 29 2.3
06_03_0672 + 23359510-23361253,23389969-23390203,23392078-233922... 29 2.3
01_01_0112 - 838809-839748,839781-839908,840203-840274,840306-84... 28 4.0
07_03_1778 + 29451902-29452166,29452665-29452849,29453504-294536... 27 5.3
04_04_1580 - 34576595-34576723,34576905-34576981,34577058-345771... 27 5.3
10_08_0633 + 19446075-19446488,19446607-19446975,19447961-194480... 27 7.0
06_03_0107 + 16709543-16709640,16712555-16713408,16715051-167151... 27 7.0
10_08_0269 - 16366392-16366403,16366469-16368262 27 9.2
10_02_0166 - 6065088-6065093,6066671-6068544,6068643-6069548,606... 27 9.2
10_02_0129 + 5584585-5584732,5586567-5586968,5587038-5587106,558... 27 9.2
09_02_0469 - 9610883-9611338,9611749-9611871,9612199-9612375,961... 27 9.2
08_01_0429 + 3767486-3768022,3768247-3768523,3769132-3769364,377... 27 9.2
07_03_1612 - 28140155-28140781,28140913-28141182 27 9.2
06_03_1377 - 29692895-29692899,29700435-29702190 27 9.2
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 27 9.2
04_03_0133 - 11653859-11653962,11658466-11658979 27 9.2
03_05_0341 + 23300588-23300710,23300958-23301363,23301463-233016... 27 9.2
01_06_0695 - 31292622-31293317 27 9.2
>02_02_0322 -
8938101-8938149,8938235-8938458,8938545-8938605,
8938724-8940761,8940797-8940908,8942037-8942047,
8942293-8942443
Length = 881
Score = 29.5 bits (63), Expect = 1.3
Identities = 17/59 (28%), Positives = 24/59 (40%)
Frame = +3
Query: 159 NEPRAPSTGDHPVLPSIIDDIKLNPNTRYARSLSTPNKYHGGSHTISKSSQSTGPTHPG 335
+ PRA TGD I K+N R+ N Y + K+ + GP +PG
Sbjct: 710 DHPRAVKTGDSFFTNLIKKSFKINNGMGNGRAKVFINGYPISDRAVRKAEKIAGPIYPG 768
>12_02_1265 - 27435096-27437675
Length = 859
Score = 29.1 bits (62), Expect = 1.7
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +3
Query: 162 EPRAPSTGDHPVLPSIIDDIKLNPNTRYARSLSTPNKYHGGSHTISKSSQST 317
EP + +T +HP P ++ + + P+ + ARS+S G +T + +ST
Sbjct: 99 EPASGNTSNHPRTPQVLGNDYVQPSKQTARSISHSAIAGAGVYTELVNLKST 150
>07_03_0041 + 12727924-12728250
Length = 108
Score = 29.1 bits (62), Expect = 1.7
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = +3
Query: 114 KRSADDEPLWLFKDNNEPRAPSTGDH--PVLPSIIDDIKLNPNTRYARSLSTP 266
K S PLW KD+ T D PVL +D PN R+ SL+TP
Sbjct: 6 KASPSSPPLWRQKDSLFRWVAITKDPLGPVLEQCLDIPTTLPNLRHNASLNTP 58
>07_01_0553 - 4119782-4119988,4120160-4120320,4120861-4121155
Length = 220
Score = 28.7 bits (61), Expect = 2.3
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +1
Query: 334 VTTDVMYVVSIRVAVSIMVEALRRLVVARTPAKL 435
V T ++ V+I AV V A+RR +ARTPA L
Sbjct: 54 VATQLVVTVAIAAAV-YSVPAIRRFFLARTPASL 86
>06_03_0672 +
23359510-23361253,23389969-23390203,23392078-23392234,
23392535-23392597
Length = 732
Score = 28.7 bits (61), Expect = 2.3
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +2
Query: 11 GVVCRRNDMLEKRFTCYLSYISSTAHSRPCD 103
G+ C D+L+ TCY+++++S++ S CD
Sbjct: 468 GISC---DLLDDSATCYIAHVASSSISTSCD 495
>01_01_0112 -
838809-839748,839781-839908,840203-840274,840306-840374,
840634-840698,840732-840907,841006-841757
Length = 733
Score = 27.9 bits (59), Expect = 4.0
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -1
Query: 101 HRADCGPWTICRINNR*ISSPTCRFGD 21
HR DC P+T R++N +SSP R GD
Sbjct: 38 HRHDCLPFTCGRLSN--VSSPFRRRGD 62
>07_03_1778 +
29451902-29452166,29452665-29452849,29453504-29453693,
29453990-29454168,29454263-29454314,29454426-29454553,
29454920-29455099,29455209-29455276,29455364-29455506,
29455682-29455743,29455874-29455987,29456180-29456320,
29456680-29456832,29456973-29457026,29457102-29457212,
29457339-29457512,29457600-29457680,29457788-29457886,
29457905-29458057
Length = 843
Score = 27.5 bits (58), Expect = 5.3
Identities = 28/113 (24%), Positives = 42/113 (37%), Gaps = 8/113 (7%)
Frame = +3
Query: 54 PVIYPTY--RPRPTVGPVTMRAKRSADDEPLWLFKDNNEPRAPSTGDH-----PVLPSII 212
P++ PT P PTV DDE + NN + G P S
Sbjct: 103 PLVRPTTPRSPVPTVSAFETIEDSDDDDENIAPDAKNNAVSLLTNGTIGSDPLPGKASQN 162
Query: 213 DDIKLNPNTRYARSLSTPNKYHGGSHT-ISKSSQSTGPTHPGYNRRHVRSFDS 368
D K P+T RS S HG H ++ P H ++R ++ + ++
Sbjct: 163 GDTKPVPSTNMIRSQSATGSLHGAQHNPVAADILRKEPEHETFSRINITAVET 215
>04_04_1580 -
34576595-34576723,34576905-34576981,34577058-34577104,
34577864-34577964,34578114-34578203,34578647-34578763,
34578835-34578992,34579562-34579843,34580367-34580667
Length = 433
Score = 27.5 bits (58), Expect = 5.3
Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 7/107 (6%)
Frame = +3
Query: 51 LPVIYPTYRPRPTVGPVTMRAKRSADDEPLWLFKDNNEPRAPSTG-DHPVLPSIIDDIK- 224
+PV +Y PR T+ P + L + ++N + R PS P LPS D++
Sbjct: 67 MPVAPCSYVPRYTMVPTSAMLPLQHHHRQLQISQENFQDRVPSNNVAAPHLPSNFQDLRP 126
Query: 225 -LN--PNTRYARSLSTPNKYHGG--SHTISKSSQSTGPTHPGYNRRH 350
N P Y ++ S N + ++ + + + P +P Y H
Sbjct: 127 MCNGPPFMSYGQTASNRNVLYQNLTPYSFNAWASNNMPRNPVYTSYH 173
>10_08_0633 +
19446075-19446488,19446607-19446975,19447961-19448054,
19448137-19448174,19448770-19448916,19449580-19449679,
19449786-19450744,19451143-19451295
Length = 757
Score = 27.1 bits (57), Expect = 7.0
Identities = 17/44 (38%), Positives = 20/44 (45%)
Frame = +3
Query: 126 DDEPLWLFKDNNEPRAPSTGDHPVLPSIIDDIKLNPNTRYARSL 257
DDEP W + N EP P LP +DDI+L SL
Sbjct: 591 DDEPKWDNQPNWEPETPID-----LPGPLDDIELGLTKELVPSL 629
>06_03_0107 +
16709543-16709640,16712555-16713408,16715051-16715193,
16715312-16715573,16715835-16716150,16716257-16716383,
16717088-16717149,16717291-16717374,16717438-16717494,
16717705-16717768,16718057-16718152
Length = 720
Score = 27.1 bits (57), Expect = 7.0
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 40 GEEIYLLFILHIVHGPQS 93
GE YL +LHIV GP+S
Sbjct: 143 GEAYYLRMLLHIVKGPRS 160
>10_08_0269 - 16366392-16366403,16366469-16368262
Length = 601
Score = 26.6 bits (56), Expect = 9.2
Identities = 10/31 (32%), Positives = 21/31 (67%)
Frame = +2
Query: 11 GVVCRRNDMLEKRFTCYLSYISSTAHSRPCD 103
G+ C D+L+ TC++++++S++ S CD
Sbjct: 470 GISC---DLLDDSATCHIAHVASSSISTSCD 497
>10_02_0166 -
6065088-6065093,6066671-6068544,6068643-6069548,
6069623-6069676,6069751-6069808
Length = 965
Score = 26.6 bits (56), Expect = 9.2
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +1
Query: 25 PKRHVGEEIYLLFILHIVHGPQSAL 99
P +H E+Y + + H++HGP L
Sbjct: 556 PNKHKYPELYEMVVKHMMHGPCGTL 580
>10_02_0129 +
5584585-5584732,5586567-5586968,5587038-5587106,
5587181-5587234,5587309-5588214,5588313-5590283,
5590833-5591235,5591845-5591857
Length = 1321
Score = 26.6 bits (56), Expect = 9.2
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +1
Query: 25 PKRHVGEEIYLLFILHIVHGPQSAL 99
P +H E+Y + + H++HGP L
Sbjct: 743 PNKHKYPELYEMVVKHMMHGPCGTL 767
>09_02_0469 -
9610883-9611338,9611749-9611871,9612199-9612375,
9614416-9614501,9615519-9615678,9616122-9617438,
9619463-9620428,9621452-9621766
Length = 1199
Score = 26.6 bits (56), Expect = 9.2
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +1
Query: 112 LNEARMMNLYGCSKTTTSPVHRLLEITRYC 201
L + R +NL GCSK + P+ L C
Sbjct: 635 LTKLRFLNLSGCSKLSALPIRFLESFASLC 664
>08_01_0429 +
3767486-3768022,3768247-3768523,3769132-3769364,
3773221-3773625,3773717-3773755
Length = 496
Score = 26.6 bits (56), Expect = 9.2
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 10 RCCLSPKRHVGEEIYLLFILHIVHG 84
R C S RHVG +Y+ F +++G
Sbjct: 411 RICKSLSRHVGHILYMTFSALVIYG 435
>07_03_1612 - 28140155-28140781,28140913-28141182
Length = 298
Score = 26.6 bits (56), Expect = 9.2
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 216 DIKLNPNTRYARSLSTPNKYHGGSH 290
+I+L T+Y RS+ TP HG H
Sbjct: 109 EIELFSTTQYTRSMMTPAALHGHLH 133
>06_03_1377 - 29692895-29692899,29700435-29702190
Length = 586
Score = 26.6 bits (56), Expect = 9.2
Identities = 10/31 (32%), Positives = 21/31 (67%)
Frame = +2
Query: 11 GVVCRRNDMLEKRFTCYLSYISSTAHSRPCD 103
G+ C D+L+ TC++++++S++ S CD
Sbjct: 470 GISC---DLLDDSATCHIAHVASSSISTSCD 497
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 26.6 bits (56), Expect = 9.2
Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +3
Query: 165 PRAPSTGDHPVLPSII-DDIKLNPNTRYARSLSTPNKYHGGSHTISKSSQSTGPTHPGYN 341
P +PS P PS +K P+ Y S S+PN Y S T S +S S P Y+
Sbjct: 1796 PTSPSYS--PSSPSYNPSSVKYTPSHAY--SPSSPNYYSSTSPTYSPTSPSYSQPSPSYS 1851
>04_03_0133 - 11653859-11653962,11658466-11658979
Length = 205
Score = 26.6 bits (56), Expect = 9.2
Identities = 10/31 (32%), Positives = 21/31 (67%)
Frame = +2
Query: 11 GVVCRRNDMLEKRFTCYLSYISSTAHSRPCD 103
G+ C D+L+ TC++++++S++ S CD
Sbjct: 58 GISC---DLLDDSATCHIAHVASSSISTSCD 85
>03_05_0341 +
23300588-23300710,23300958-23301363,23301463-23301671,
23301944-23302298,23302392-23302630,23303777-23304055
Length = 536
Score = 26.6 bits (56), Expect = 9.2
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 255 LSTPNKYHGGSHTISKSSQSTGPTHPGY 338
+S+ + HG SH +S S GP+ P Y
Sbjct: 368 VSSESNKHGVSHESLESEDSDGPSEPPY 395
>01_06_0695 - 31292622-31293317
Length = 231
Score = 26.6 bits (56), Expect = 9.2
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 225 LNPNTRYARSLSTPNKYHGGSHTISKSSQSTGPTHP 332
+ P+T+ + + S T S SS ST P+HP
Sbjct: 1 MEPSTKQLLPMPQQDPNSPSSSTSSSSSSSTSPSHP 36
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,601,354
Number of Sequences: 37544
Number of extensions: 256302
Number of successful extensions: 764
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 757
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 871620292
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -