Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_P15
         (285 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   3.9  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   3.9  
DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride c...    20   5.2  
DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride c...    20   5.2  
AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl sub...    20   5.2  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 3.9
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 104 GDAQSRSKGLEEKVDQLTEM 163
           GD     +G++EK+D   EM
Sbjct: 45  GDGIGDIEGIKEKLDHFLEM 64


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 3.9
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 104 GDAQSRSKGLEEKVDQLTEM 163
           GD     +G++EK+D   EM
Sbjct: 45  GDGIGDIEGIKEKLDHFLEM 64


>DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 20.2 bits (40), Expect = 5.2
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 112 PKSF*RAGGEGRSINGNVHEEAS 180
           PK+  + G    +ING   EEA+
Sbjct: 358 PKAHSKGGTLENTINGRADEEAA 380


>DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 20.2 bits (40), Expect = 5.2
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 112 PKSF*RAGGEGRSINGNVHEEAS 180
           PK+  + G    +ING   EEA+
Sbjct: 358 PKAHSKGGTLENTINGRADEEAA 380


>AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl
           subunit protein.
          Length = 365

 Score = 20.2 bits (40), Expect = 5.2
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 112 PKSF*RAGGEGRSINGNVHEEAS 180
           PK+  + G    +ING   EEA+
Sbjct: 296 PKAHSKGGTLENTINGRADEEAA 318


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,529
Number of Sequences: 438
Number of extensions: 1595
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5619645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)