Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_P13
         (248 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC113467-1|AAI13468.1| 1121|Homo sapiens WD repeat domain 6 prot...    29   2.7  
BC101707-1|AAI01708.1| 1121|Homo sapiens WD repeat domain 6 prot...    29   2.7  
AK001080-1|BAA91497.1|  216|Homo sapiens protein ( Homo sapiens ...    29   2.7  
AF099100-1|AAF80244.1| 1121|Homo sapiens WD-repeat protein 6 pro...    29   2.7  
BC112113-1|AAI12114.1|  420|Homo sapiens hypothetical protein LO...    27   8.3  
BC104779-1|AAI04780.1|  420|Homo sapiens FLJ25476 protein protein.     27   8.3  
AL513327-1|CAI13953.1|  420|Homo sapiens zinc finger protein 362...    27   8.3  

>BC113467-1|AAI13468.1| 1121|Homo sapiens WD repeat domain 6
           protein.
          Length = 1121

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 11/21 (52%), Positives = 12/21 (57%), Gaps = 1/21 (4%)
 Frame = +1

Query: 178 GSGRIWR-W*SGIWTMSGRIW 237
           G G  W  W SG+W MS  IW
Sbjct: 100 GQGHFWELWRSGLWNMSDWIW 120


>BC101707-1|AAI01708.1| 1121|Homo sapiens WD repeat domain 6 protein
           protein.
          Length = 1121

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 11/21 (52%), Positives = 12/21 (57%), Gaps = 1/21 (4%)
 Frame = +1

Query: 178 GSGRIWR-W*SGIWTMSGRIW 237
           G G  W  W SG+W MS  IW
Sbjct: 100 GQGHFWELWRSGLWNMSDWIW 120


>AK001080-1|BAA91497.1|  216|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10218 fis, clone HEMBA1006936. ).
          Length = 216

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 11/21 (52%), Positives = 12/21 (57%), Gaps = 1/21 (4%)
 Frame = +1

Query: 178 GSGRIWR-W*SGIWTMSGRIW 237
           G G  W  W SG+W MS  IW
Sbjct: 100 GQGHFWELWRSGLWNMSDWIW 120


>AF099100-1|AAF80244.1| 1121|Homo sapiens WD-repeat protein 6
           protein.
          Length = 1121

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 11/21 (52%), Positives = 12/21 (57%), Gaps = 1/21 (4%)
 Frame = +1

Query: 178 GSGRIWR-W*SGIWTMSGRIW 237
           G G  W  W SG+W MS  IW
Sbjct: 100 GQGHFWELWRSGLWNMSDWIW 120


>BC112113-1|AAI12114.1|  420|Homo sapiens hypothetical protein
           LOC149076 protein.
          Length = 420

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -1

Query: 230 LPDIVQIPDYHLQILPDPDQNLDQPVHWSPCSGLKL 123
           LP + Q+P  H Q +P PD  L      S  +GL L
Sbjct: 85  LPKLQQVPGLHPQAVPQPDVALHARPATSTVTGLGL 120


>BC104779-1|AAI04780.1|  420|Homo sapiens FLJ25476 protein protein.
          Length = 420

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -1

Query: 230 LPDIVQIPDYHLQILPDPDQNLDQPVHWSPCSGLKL 123
           LP + Q+P  H Q +P PD  L      S  +GL L
Sbjct: 85  LPKLQQVPGLHPQAVPQPDVALHARPATSTVTGLGL 120


>AL513327-1|CAI13953.1|  420|Homo sapiens zinc finger protein 362
           protein.
          Length = 420

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -1

Query: 230 LPDIVQIPDYHLQILPDPDQNLDQPVHWSPCSGLKL 123
           LP + Q+P  H Q +P PD  L      S  +GL L
Sbjct: 85  LPKLQQVPGLHPQAVPQPDVALHARPATSTVTGLGL 120


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,157,992
Number of Sequences: 237096
Number of extensions: 445593
Number of successful extensions: 813
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 813
length of database: 76,859,062
effective HSP length: 60
effective length of database: 62,633,302
effective search space used: 1377932644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)