Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_P13
         (248 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68117-2|CAA92178.1|  333|Caenorhabditis elegans Hypothetical pr...    26   4.1  
AF000261-10|AAB52930.1|  639|Caenorhabditis elegans Hypothetical...    25   5.4  

>Z68117-2|CAA92178.1|  333|Caenorhabditis elegans Hypothetical
           protein F45E6.4 protein.
          Length = 333

 Score = 25.8 bits (54), Expect = 4.1
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -2

Query: 97  GIVHRSQNLRNEVGRYIRVRMLKLHRRF 14
           GI +  +N+ N   R+   + ++LHRRF
Sbjct: 111 GITYGDRNISNSYIRHFNCQNVQLHRRF 138


>AF000261-10|AAB52930.1|  639|Caenorhabditis elegans Hypothetical
           protein F19B10.10 protein.
          Length = 639

 Score = 25.4 bits (53), Expect = 5.4
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -2

Query: 115 YLQIQPGIVHRSQNLRNEVGRYIRVRMLKLHRR 17
           +L IQ  ++ R   LRN V  ++    LK H +
Sbjct: 123 FLSIQDNLIVRKPVLRNRVSLFMLAYFLKYHEK 155


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,417,429
Number of Sequences: 27780
Number of extensions: 64321
Number of successful extensions: 125
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 125
length of database: 12,740,198
effective HSP length: 62
effective length of database: 11,017,838
effective search space used: 220356760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)