Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_P12
         (407 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          21   4.1  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          21   4.1  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          21   4.1  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          21   4.1  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          21   4.1  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          21   4.1  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    21   4.1  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    21   7.1  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    21   7.1  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   7.1  

>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 4.1
 Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = +3

Query: 48  SEGTATIRTRKFMTDRLLARRQMVCDV--LHPGKPTVSKTEIREKL 179
           S+GT+  R  +         R++  D+  + PGKPT +  E++  +
Sbjct: 106 SDGTSLFRGPEGTQVSATELRKIKVDIHRVLPGKPTTTSDELKRDI 151


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 4.1
 Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = +3

Query: 48  SEGTATIRTRKFMTDRLLARRQMVCDV--LHPGKPTVSKTEIREKL 179
           S+GT+  R  +         R++  D+  + PGKPT +  E++  +
Sbjct: 106 SDGTSLFRGPEGTQVSATELRKIKVDIHRVLPGKPTTTSDELKRDI 151


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 4.1
 Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = +3

Query: 48  SEGTATIRTRKFMTDRLLARRQMVCDV--LHPGKPTVSKTEIREKL 179
           S+GT+  R  +         R++  D+  + PGKPT +  E++  +
Sbjct: 106 SDGTSLFRGPEGTQVSATELRKIKVDIHRVLPGKPTTTSDELKRDI 151


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 4.1
 Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = +3

Query: 48  SEGTATIRTRKFMTDRLLARRQMVCDV--LHPGKPTVSKTEIREKL 179
           S+GT+  R  +         R++  D+  + PGKPT +  E++  +
Sbjct: 106 SDGTSLFRGPEGTQVSATELRKIKVDIHRVLPGKPTTTSDELKRDI 151


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 4.1
 Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = +3

Query: 48  SEGTATIRTRKFMTDRLLARRQMVCDV--LHPGKPTVSKTEIREKL 179
           S+GT+  R  +         R++  D+  + PGKPT +  E++  +
Sbjct: 106 SDGTSLFRGPEGTQVSATELRKIKVDIHRVLPGKPTTTSDELKRDI 151


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 21.4 bits (43), Expect = 4.1
 Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = +3

Query: 48  SEGTATIRTRKFMTDRLLARRQMVCDV--LHPGKPTVSKTEIREKL 179
           S+GT+  R  +         R++  D+  + PGKPT +  E++  +
Sbjct: 106 SDGTSLFRGPEGTQVSATELRKIKVDIHRVLPGKPTTTSDELKRDI 151


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 4.1
 Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = +3

Query: 48  SEGTATIRTRKFMTDRLLARRQMVCDV--LHPGKPTVSKTEIREKL 179
           S+GT+  R  +         R++  D+  + PGKPT +  E++  +
Sbjct: 106 SDGTSLFRGPEGTQVSATELRKIKVDIHRVLPGKPTTTSDELKRDI 151


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 126 VLHPGKPTVSKTEIREK 176
           +LHP + T  K   REK
Sbjct: 15  LLHPSRCTQGKVNYREK 31


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 126 VLHPGKPTVSKTEIREK 176
           +LHP + T  K   REK
Sbjct: 15  LLHPSRCTQGKVNYREK 31


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = +2

Query: 197 DARRSFRVRFQDELRWWQIDRICF 268
           + +R+  +    + + W IDR CF
Sbjct: 173 NCKRTATITAATDCQLWAIDRQCF 196


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,675
Number of Sequences: 438
Number of extensions: 1741
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10256061
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)