Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_P10
         (526 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   8.8  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   8.8  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   8.8  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 523 RTCASWILWAVRSVGR 476
           RT A W LW  ++ G+
Sbjct: 566 RTAAIWPLWCSQNPGK 581


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 112 LLEKQREALVNSAECRPER 168
           LLE ++E   N   CRP R
Sbjct: 16  LLELEKEFHFNKYLCRPRR 34


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 112 LLEKQREALVNSAECRPER 168
           LLE ++E   N   CRP R
Sbjct: 147 LLELEKEFHFNKYLCRPRR 165


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,891
Number of Sequences: 336
Number of extensions: 1318
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12678017
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)